| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611345
Identifier: 120611345
GI number: 120611345
Start: 2944187
End: 2945896
Strand: Direct
Name: 120611345
Synonym: Aave_2677
Alternate gene names: NA
Gene position: 2944187-2945896 (Clockwise)
Preceding gene: 120611344
Following gene: 120611346
Centisome position: 55.0
GC content: 57.08
Gene sequence:
>1710_bases ATGCGAACGCCCGAAACGCTCACGGCGGTGGAGCGTGCTGCGCAACTGCGCCAGCGAGGATCCACCAGCGCCACGGGGGA GTCGACCGGCTCCCCCGCTTCTGCACCAACCCAAGGTGCCAAACCTATGACAGCCCAAGAGAAAATGCGCGAATCTGCGC GCGCAGCGCTTAATAAAGGTTCCGCGAATGCGACTGCGAACCTAGATCCATTGGAAGAGGTTGACGGATCGCTGACGATA TTGAGCATTCACGAGATTGATCCTTACAAGTACAACCCCCGGACCAAGCCGAACCCTGCCAGGGCGAATCTCAAGGCCAG CATGAAGGCCGAGGGAATTACGAATGTAATCACGGTGACGCGCCGCTCCCCGAAAGAGAAGTATTTCCCTTATGGCGGGG GGAACACGCGGATCGAGCTCGCCAAAGAGCTTTACGCCGAAGGCGAGGATCGCTTCGCAACCCTCGCCGTCGTAACGAAG AAGTGGCCCGGAGAGGCGGCAGTCATTTCTGCCCATCTCAGCGAAAACGACAATCGTGGCGACATCTCGTTTTGGGAGCG CGCACAGGGTGTTGCGGCATTTAAACGAGAGTTCGAGCGAGAATCTGGCCGAATTCTGACTGCTGCCGAGATTAACAAGG AACTGAAGGAGCGCGGTCTCAACTACGGGCTCAAGACCATTCAGAACTTCGCATTTGCGACGGAGCATCTATATCCTGTA GGTCCGTGGTTACAAACCAAGGAAGTCAACGAAATAATTCGACCACTGATCGGTGCTATTCAGGAGCTTTCGCGCAAGGG AGACGCTGCGGGACAAGTGAAGGCCGCGATCGATGAAATTCTGCTGATGCACGGCCAGGATCTTGAATCGCTGGAACTTA GCAACAAGGACGCCGAGCCAGGTTCTCGTACCGAGGTGCGTATCGACGTGCAAAGCCTTATTACCGACTTGCAGAGTGTC TCGGCGAAAGTCTTGAGGCTGGATGCTGACCGGATGCCTCAGATTCTGAAGGAGGTTATTGGAAATCCCAAGGCGTCGTT CGCTGATCTGACGGGCACTCGGAAGGAACCACCAGATAAGCCGCCAGAGGGACAAGGAAAGGCTCGCCAGATGCCGCTTG GACCAATGCTTGGAAGCGTTACAGCCGGAAAGACACCCGTGCCCTCCATGGAGCGCGAGCGGAGCGCTACCGCGCCGGGG AGCCAAACGCAGGAAGAGCGTCTGGCGGTGTTCAGCCAACAACTCACCAACGATTTTCTCGCGCTGAACGATGTGGTGCC GATCTCGGACTTCATACGTGTCGAGCCCGCTCTGCCGTTCGGATTCCTTGTGGACTTCCCTCAGGCCAGCGATGCCATCG CCGGCCAGTCGCTCACCGAGGAGCAGGCGGGAATGCGAGAAGCCATCTGGCCCATCCTCGCTGCTCTTTCGGGCCAATGC AGCCAACCTCTGATGGAACGATGCAGCGCCGAAAGCGGCTGGGCCGAGGCGGTAGCTCGGGGCCCTGCAGAGCTCGAAGC GCGATGCGCTGCGATTCGAGCTCCATTTCGCAACGGCCTCATGTACGTCACCTCCTTTCATTTCCTCTTTGCTTTAAGCA CGCCTCGCGTGGGACCAGTGCTTTCGGCCGTCCTCAAAACTATCTTTGAATTTAGCAAAGATCATCCCGAACTGACCAAA GCGCCATTTAAACACATTTTCGCAAATTGA
Upstream 100 bases:
>100_bases GAACTGATGTGGGAACTCATTCCCAACGTCGCAGGCTTCCGGGCCTCTACTTTCAAGACCTCCGCCGACCAAGCCACTGC CGCCTGAAATGGAGGCAGTA
Downstream 100 bases:
>100_bases ATTTTTCGGTGTTCATATGATTGACCGCAGATTGCCTATTGAGTTTCGTGCCAACGACCAGCTCAATTATCTACTGCTGA CTGAGTTGGTCCGTCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MRTPETLTAVERAAQLRQRGSTSATGESTGSPASAPTQGAKPMTAQEKMRESARAALNKGSANATANLDPLEEVDGSLTI LSIHEIDPYKYNPRTKPNPARANLKASMKAEGITNVITVTRRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTK KWPGEAAVISAHLSENDNRGDISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYGLKTIQNFAFATEHLYPV GPWLQTKEVNEIIRPLIGAIQELSRKGDAAGQVKAAIDEILLMHGQDLESLELSNKDAEPGSRTEVRIDVQSLITDLQSV SAKVLRLDADRMPQILKEVIGNPKASFADLTGTRKEPPDKPPEGQGKARQMPLGPMLGSVTAGKTPVPSMERERSATAPG SQTQEERLAVFSQQLTNDFLALNDVVPISDFIRVEPALPFGFLVDFPQASDAIAGQSLTEEQAGMREAIWPILAALSGQC SQPLMERCSAESGWAEAVARGPAELEARCAAIRAPFRNGLMYVTSFHFLFALSTPRVGPVLSAVLKTIFEFSKDHPELTK APFKHIFAN
Sequences:
>Translated_569_residues MRTPETLTAVERAAQLRQRGSTSATGESTGSPASAPTQGAKPMTAQEKMRESARAALNKGSANATANLDPLEEVDGSLTI LSIHEIDPYKYNPRTKPNPARANLKASMKAEGITNVITVTRRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTK KWPGEAAVISAHLSENDNRGDISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYGLKTIQNFAFATEHLYPV GPWLQTKEVNEIIRPLIGAIQELSRKGDAAGQVKAAIDEILLMHGQDLESLELSNKDAEPGSRTEVRIDVQSLITDLQSV SAKVLRLDADRMPQILKEVIGNPKASFADLTGTRKEPPDKPPEGQGKARQMPLGPMLGSVTAGKTPVPSMERERSATAPG SQTQEERLAVFSQQLTNDFLALNDVVPISDFIRVEPALPFGFLVDFPQASDAIAGQSLTEEQAGMREAIWPILAALSGQC SQPLMERCSAESGWAEAVARGPAELEARCAAIRAPFRNGLMYVTSFHFLFALSTPRVGPVLSAVLKTIFEFSKDHPELTK APFKHIFAN >Mature_569_residues MRTPETLTAVERAAQLRQRGSTSATGESTGSPASAPTQGAKPMTAQEKMRESARAALNKGSANATANLDPLEEVDGSLTI LSIHEIDPYKYNPRTKPNPARANLKASMKAEGITNVITVTRRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTK KWPGEAAVISAHLSENDNRGDISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYGLKTIQNFAFATEHLYPV GPWLQTKEVNEIIRPLIGAIQELSRKGDAAGQVKAAIDEILLMHGQDLESLELSNKDAEPGSRTEVRIDVQSLITDLQSV SAKVLRLDADRMPQILKEVIGNPKASFADLTGTRKEPPDKPPEGQGKARQMPLGPMLGSVTAGKTPVPSMERERSATAPG SQTQEERLAVFSQQLTNDFLALNDVVPISDFIRVEPALPFGFLVDFPQASDAIAGQSLTEEQAGMREAIWPILAALSGQC SQPLMERCSAESGWAEAVARGPAELEARCAAIRAPFRNGLMYVTSFHFLFALSTPRVGPVLSAVLKTIFEFSKDHPELTK APFKHIFAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62001; Mature: 62001
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPETLTAVERAAQLRQRGSTSATGESTGSPASAPTQGAKPMTAQEKMRESARAALNKG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC SANATANLDPLEEVDGSLTILSIHEIDPYKYNPRTKPNPARANLKASMKAEGITNVITVT CCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEE RRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTKKWPGEAAVISAHLSENDNRG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC DISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYGLKTIQNFAFATEHLYPV CCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC GPWLQTKEVNEIIRPLIGAIQELSRKGDAAGQVKAAIDEILLMHGQDLESLELSNKDAEP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC GSRTEVRIDVQSLITDLQSVSAKVLRLDADRMPQILKEVIGNPKASFADLTGTRKEPPDK CCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC PPEGQGKARQMPLGPMLGSVTAGKTPVPSMERERSATAPGSQTQEERLAVFSQQLTNDFL CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ALNDVVPISDFIRVEPALPFGFLVDFPQASDAIAGQSLTEEQAGMREAIWPILAALSGQC HHCCCCCCHHHHEECCCCCCHHEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC SQPLMERCSAESGWAEAVARGPAELEARCAAIRAPFRNGLMYVTSFHFLFALSTPRVGPV CHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCHHHH LSAVLKTIFEFSKDHPELTKAPFKHIFAN HHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRTPETLTAVERAAQLRQRGSTSATGESTGSPASAPTQGAKPMTAQEKMRESARAALNKG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC SANATANLDPLEEVDGSLTILSIHEIDPYKYNPRTKPNPARANLKASMKAEGITNVITVT CCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEE RRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTKKWPGEAAVISAHLSENDNRG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC DISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYGLKTIQNFAFATEHLYPV CCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC GPWLQTKEVNEIIRPLIGAIQELSRKGDAAGQVKAAIDEILLMHGQDLESLELSNKDAEP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC GSRTEVRIDVQSLITDLQSVSAKVLRLDADRMPQILKEVIGNPKASFADLTGTRKEPPDK CCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC PPEGQGKARQMPLGPMLGSVTAGKTPVPSMERERSATAPGSQTQEERLAVFSQQLTNDFL CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ALNDVVPISDFIRVEPALPFGFLVDFPQASDAIAGQSLTEEQAGMREAIWPILAALSGQC HHCCCCCCHHHHEECCCCCCHHEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC SQPLMERCSAESGWAEAVARGPAELEARCAAIRAPFRNGLMYVTSFHFLFALSTPRVGPV CHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCHHHH LSAVLKTIFEFSKDHPELTKAPFKHIFAN HHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA