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The map label for this gene is yqjE [H]

Identifier: 120611335

GI number: 120611335

Start: 2926844

End: 2928229

Strand: Reverse

Name: yqjE [H]

Synonym: Aave_2667

Alternate gene names: 120611335

Gene position: 2928229-2926844 (Counterclockwise)

Preceding gene: 120611336

Following gene: 120611333

Centisome position: 54.7

GC content: 72.08

Gene sequence:

>1386_bases
ATGCCACTGCACGCATCCCCTCGATCCCTCCCCGCTTTCCGCCAGCCGCCCGCCGGCTGGAAGCCCGTCCTGGCGGCCGT
GCTGGCGCTCGGCGCGCTCGCCGCCGGCCCGGCCTCCGCCCAGGCCACCGCACCGCAGCCCGGCGCCAGCCCGGCCGTGC
AGCGTGCGCTGCAGGCCGTGCGTTCGGCCCCCGCCGTGCAGCAGGTACTGGACGGCGTGCGCGCAGACCATGACCGCGCC
ATCGCCGAACTGCGCCAGTTGGTACAGATTCCCGCGCCGCCCTTCAAGGAACAGCGCCGCGCCGAATACGTGGTGAAGCG
TTTCCAGGAACTGGGCCTGGCCGATGCCGCCATCGACCGGGAAGGCAATGCCGTGGGCATCCGCAAGGGCACGGGCAACG
GCCCCAGGCTGGTGGTGTCGGCGCACCTCGATACCGTGTTCCCCGAGGGCACCGACCTCACCGTGCGCGAGGAAGGCGGC
CGGCTGTACGCCCCCGGCATTTCGGACGACACGCGCGGCGTCACGGTGCTGCTCTCCTGGCTCAAGGCGCTCAACGAACG
CCAGCTGCAGACGGTGGGCGACATCGTCTTCGTGGCGAATGTGGGCGAGGAGGAACTGGGCAACCTGCGCGGCATGAAGG
CCCTGTTCCGCGAGCATGCGGACATCGACGGCATGGTCGGCCTGGAGCCCGGCGAGGGCGACGGCATCCTCAACCAGGGC
ACGGGCAGCCACCGCTACGAAGTCGCTTTCAAGGGGCCGGGCGGCCACAGCTTCGCGGCCTTCGGACAGGTGCCGAGCGC
GATCCATGCGATGGGCCGCGCGATCGCGCACATCGGCGACGTGCAGGTGCCGGCCGATCCCAAGACCACCTTCACCGTGG
GCAAGGTGGGCGGCGGCACCTCCGTGAACACCATCGCGGGCGACGCCACGATGGCCGTGGACATCCGCTCCAACGCCCTG
CCCGCGCTGCTGCAGGCGGAAAAAGACATCATGGCCGCCATCCAGCGCGGCGTTCAGGAAGAAAACCGCCGCTGGAACAC
CGCCGCACGGATCACGGCCGAGCCGAAGATGATCGGCGACCGCCCGGCGGGCGCCACCGCCGCCGGCGAGCCCATCGTGC
AGGCCGCCGTGGCCTCGGTCATCGCCTCGGGCGGCAAGCCCACGCTGCGCGCGGCCAGCACCGACGCCAACGTGCCCATG
GGGCTGGGCATCCCCGCCATCATCCTGGGCAGCGGCGGCAAGACCGGCGGCTTCCACGCGCTGGGCGAGTGGTTCGACCC
GGCCGATGCCTGGAAGGGCGCGCAGACCGGGCTCGCCACGGTACTGACACTGGTGGGCGTGCAGGGCGTGAGCGAGCCGG
TCCTGGCACGCCGCCCGCGCCGCTGA

Upstream 100 bases:

>100_bases
CCCGGAGACCATGGGGATGGGCCGCCCGCAGGTGACAAGCCAGGGGCCTGGCCCGGGGTAAGGTGGCCCTCTCCCCGGTC
CTCCCAAGAAAGGCTGTCCG

Downstream 100 bases:

>100_bases
GGGAAAGGACCCGGGTCAGGCCCGCGCCGGCCGGCCCGGCCGCTCGTTCAGGCGCACCGGGCCCGAGCGCGCCTCGACCG
CCGCCTGCACCTCGCGACGC

Product: peptidase M20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MPLHASPRSLPAFRQPPAGWKPVLAAVLALGALAAGPASAQATAPQPGASPAVQRALQAVRSAPAVQQVLDGVRADHDRA
IAELRQLVQIPAPPFKEQRRAEYVVKRFQELGLADAAIDREGNAVGIRKGTGNGPRLVVSAHLDTVFPEGTDLTVREEGG
RLYAPGISDDTRGVTVLLSWLKALNERQLQTVGDIVFVANVGEEELGNLRGMKALFREHADIDGMVGLEPGEGDGILNQG
TGSHRYEVAFKGPGGHSFAAFGQVPSAIHAMGRAIAHIGDVQVPADPKTTFTVGKVGGGTSVNTIAGDATMAVDIRSNAL
PALLQAEKDIMAAIQRGVQEENRRWNTAARITAEPKMIGDRPAGATAAGEPIVQAAVASVIASGGKPTLRAASTDANVPM
GLGIPAIILGSGGKTGGFHALGEWFDPADAWKGAQTGLATVLTLVGVQGVSEPVLARRPRR

Sequences:

>Translated_461_residues
MPLHASPRSLPAFRQPPAGWKPVLAAVLALGALAAGPASAQATAPQPGASPAVQRALQAVRSAPAVQQVLDGVRADHDRA
IAELRQLVQIPAPPFKEQRRAEYVVKRFQELGLADAAIDREGNAVGIRKGTGNGPRLVVSAHLDTVFPEGTDLTVREEGG
RLYAPGISDDTRGVTVLLSWLKALNERQLQTVGDIVFVANVGEEELGNLRGMKALFREHADIDGMVGLEPGEGDGILNQG
TGSHRYEVAFKGPGGHSFAAFGQVPSAIHAMGRAIAHIGDVQVPADPKTTFTVGKVGGGTSVNTIAGDATMAVDIRSNAL
PALLQAEKDIMAAIQRGVQEENRRWNTAARITAEPKMIGDRPAGATAAGEPIVQAAVASVIASGGKPTLRAASTDANVPM
GLGIPAIILGSGGKTGGFHALGEWFDPADAWKGAQTGLATVLTLVGVQGVSEPVLARRPRR
>Mature_460_residues
PLHASPRSLPAFRQPPAGWKPVLAAVLALGALAAGPASAQATAPQPGASPAVQRALQAVRSAPAVQQVLDGVRADHDRAI
AELRQLVQIPAPPFKEQRRAEYVVKRFQELGLADAAIDREGNAVGIRKGTGNGPRLVVSAHLDTVFPEGTDLTVREEGGR
LYAPGISDDTRGVTVLLSWLKALNERQLQTVGDIVFVANVGEEELGNLRGMKALFREHADIDGMVGLEPGEGDGILNQGT
GSHRYEVAFKGPGGHSFAAFGQVPSAIHAMGRAIAHIGDVQVPADPKTTFTVGKVGGGTSVNTIAGDATMAVDIRSNALP
ALLQAEKDIMAAIQRGVQEENRRWNTAARITAEPKMIGDRPAGATAAGEPIVQAAVASVIASGGKPTLRAASTDANVPMG
LGIPAIILGSGGKTGGFHALGEWFDPADAWKGAQTGLATVLTLVGVQGVSEPVLARRPRR

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 47842; Mature: 47711

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00318 HMG_COA_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHASPRSLPAFRQPPAGWKPVLAAVLALGALAAGPASAQATAPQPGASPAVQRALQAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
RSAPAVQQVLDGVRADHDRAIAELRQLVQIPAPPFKEQRRAEYVVKRFQELGLADAAIDR
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
EGNAVGIRKGTGNGPRLVVSAHLDTVFPEGTDLTVREEGGRLYAPGISDDTRGVTVLLSW
CCCEEEEECCCCCCCEEEEEECCHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHH
LKALNERQLQTVGDIVFVANVGEEELGNLRGMKALFREHADIDGMVGLEPGEGDGILNQG
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
TGSHRYEVAFKGPGGHSFAAFGQVPSAIHAMGRAIAHIGDVQVPADPKTTFTVGKVGGGT
CCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
SVNTIAGDATMAVDIRSNALPALLQAEKDIMAAIQRGVQEENRRWNTAARITAEPKMIGD
CCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
RPAGATAAGEPIVQAAVASVIASGGKPTLRAASTDANVPMGLGIPAIILGSGGKTGGFHA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCHH
LGEWFDPADAWKGAQTGLATVLTLVGVQGVSEPVLARRPRR
HHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure 
PLHASPRSLPAFRQPPAGWKPVLAAVLALGALAAGPASAQATAPQPGASPAVQRALQAV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
RSAPAVQQVLDGVRADHDRAIAELRQLVQIPAPPFKEQRRAEYVVKRFQELGLADAAIDR
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
EGNAVGIRKGTGNGPRLVVSAHLDTVFPEGTDLTVREEGGRLYAPGISDDTRGVTVLLSW
CCCEEEEECCCCCCCEEEEEECCHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHH
LKALNERQLQTVGDIVFVANVGEEELGNLRGMKALFREHADIDGMVGLEPGEGDGILNQG
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
TGSHRYEVAFKGPGGHSFAAFGQVPSAIHAMGRAIAHIGDVQVPADPKTTFTVGKVGGGT
CCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
SVNTIAGDATMAVDIRSNALPALLQAEKDIMAAIQRGVQEENRRWNTAARITAEPKMIGD
CCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
RPAGATAAGEPIVQAAVASVIASGGKPTLRAASTDANVPMGLGIPAIILGSGGKTGGFHA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCHH
LGEWFDPADAWKGAQTGLATVLTLVGVQGVSEPVLARRPRR
HHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]