| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ssuA [C]
Identifier: 120611316
GI number: 120611316
Start: 2910304
End: 2911365
Strand: Direct
Name: ssuA [C]
Synonym: Aave_2648
Alternate gene names: 120611316
Gene position: 2910304-2911365 (Clockwise)
Preceding gene: 120611315
Following gene: 120611317
Centisome position: 54.37
GC content: 70.81
Gene sequence:
>1062_bases ATGACACCGTTGTCCTTCAGCCGCAGGCGCCTGGGCGCGATGGCCCTGTCCCTGCCGCTCGCCGGCTTGGCAGGGGCCCG CGCCCAGGTGCTCGCGCCGCCGTTCAGCGCAGCATCGCAGGGGCGGGTGCGGGTGGCCGTGGGGGGCGCCGGACTGCTTT ACTACCTGCCCCTCACCGTGGCCTGGCAACTGGGCTTTTTCCGGGCCGAGGGCCTGGACGTGGCGATCCGGGATTACGCT GGCGGGGCGCTCGCGCTGCAGGCCGTGGAGCAGGGGGAGGCGGACGTCTGCTGCGGAGGCTACGACCACACGCTGCGCCG GCAATTGCAGGGACAGGACTATTGCGCCCTCGTGCTGCAGGGGCGTGCGCCGCAACTGGCTTTCGCCGCTTCCGCGCGCA ATTGGCCCGTGCGCAGCGTGCAGAGCTTCAAGGGCCTGCGGGTGGGCGTGACGGCGCCGGGTTCGTCCACCCACATGCTG GCGCAACTGGCGCTGTCGCAGAACGGAGCGTCGCTGGAGGGTATTTCCTTCATCGGCGTGGGGGCCTCGGGCCGCGGCGC GCTGGCCGCGCTCCGCCAGGGCCGCGTCCATGCGCTGTGCCATGCCGATCCCGTGGTGAGCGTGCTCGAGCAGCACGGGG AAGTGCGGCTGCTCTGCGACACGCGCACCCTGAAGGCGTCGCAGGAGCTCTTCGGCGGCACCATGCCTGCTTCGAGCCTG TACGCGCCCCGGGCGTTCGTGCAGCAGTATGCCGCCGTGTCGCAGGCGCTCGTGCATGCCATGGTGCATGCGCTCAAGTG GCTGCAGACGGCCAGCGCCGCGGACCTGATGCGCGTGGTGCCGCAGGATGACCTGCTCGGTGACCGCAGTACCTACATGG CGGCGTTCCACAAGGTGCGCGACACCTTCTCTCCGGACGGCATGATGCCCGACGACGGCCCCGCCACGGCGCTGCGCGCG CTGGCGCGGCTGCGGCCGGAATGGGCCGCCTCCAAGGTGGACCTGGGACGCACCTACACCAACGAATATGCGCGCAAGGC CAAGGCGAAGTTCAACGCCTGA
Upstream 100 bases:
>100_bases TTCCTGATTTTCCTTGTGGTTTACAGGGATTTTCCCCGGTACCGGTCGAGCGCTTTTCGGGCACGATTGCTGCACTGCAG CATAAATCACGCTCCGTTCC
Downstream 100 bases:
>100_bases GAACGCCGGCGTGCTCCGAAGTGGCGCCATGGTCCGACACCGCGGCGCCACGGCGCGGCGTTAGATTCCGGCCACTGCCC GGCAAACGGCGTCCGGGCAC
Product: putative signal peptide protein
Products: NA
Alternate protein names: Signal Peptide Protein; NMT1/THI5-Like Domain-Containing Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTPLSFSRRRLGAMALSLPLAGLAGARAQVLAPPFSAASQGRVRVAVGGAGLLYYLPLTVAWQLGFFRAEGLDVAIRDYA GGALALQAVEQGEADVCCGGYDHTLRRQLQGQDYCALVLQGRAPQLAFAASARNWPVRSVQSFKGLRVGVTAPGSSTHML AQLALSQNGASLEGISFIGVGASGRGALAALRQGRVHALCHADPVVSVLEQHGEVRLLCDTRTLKASQELFGGTMPASSL YAPRAFVQQYAAVSQALVHAMVHALKWLQTASAADLMRVVPQDDLLGDRSTYMAAFHKVRDTFSPDGMMPDDGPATALRA LARLRPEWAASKVDLGRTYTNEYARKAKAKFNA
Sequences:
>Translated_353_residues MTPLSFSRRRLGAMALSLPLAGLAGARAQVLAPPFSAASQGRVRVAVGGAGLLYYLPLTVAWQLGFFRAEGLDVAIRDYA GGALALQAVEQGEADVCCGGYDHTLRRQLQGQDYCALVLQGRAPQLAFAASARNWPVRSVQSFKGLRVGVTAPGSSTHML AQLALSQNGASLEGISFIGVGASGRGALAALRQGRVHALCHADPVVSVLEQHGEVRLLCDTRTLKASQELFGGTMPASSL YAPRAFVQQYAAVSQALVHAMVHALKWLQTASAADLMRVVPQDDLLGDRSTYMAAFHKVRDTFSPDGMMPDDGPATALRA LARLRPEWAASKVDLGRTYTNEYARKAKAKFNA >Mature_352_residues TPLSFSRRRLGAMALSLPLAGLAGARAQVLAPPFSAASQGRVRVAVGGAGLLYYLPLTVAWQLGFFRAEGLDVAIRDYAG GALALQAVEQGEADVCCGGYDHTLRRQLQGQDYCALVLQGRAPQLAFAASARNWPVRSVQSFKGLRVGVTAPGSSTHMLA QLALSQNGASLEGISFIGVGASGRGALAALRQGRVHALCHADPVVSVLEQHGEVRLLCDTRTLKASQELFGGTMPASSLY APRAFVQQYAAVSQALVHAMVHALKWLQTASAADLMRVVPQDDLLGDRSTYMAAFHKVRDTFSPDGMMPDDGPATALRAL ARLRPEWAASKVDLGRTYTNEYARKAKAKFNA
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37548; Mature: 37416
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLSFSRRRLGAMALSLPLAGLAGARAQVLAPPFSAASQGRVRVAVGGAGLLYYLPLTV CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHH AWQLGFFRAEGLDVAIRDYAGGALALQAVEQGEADVCCGGYDHTLRRQLQGQDYCALVLQ HHHHHHEEECCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEEEEE GRAPQLAFAASARNWPVRSVQSFKGLRVGVTAPGSSTHMLAQLALSQNGASLEGISFIGV CCCCCEEEECCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE GASGRGALAALRQGRVHALCHADPVVSVLEQHGEVRLLCDTRTLKASQELFGGTMPASSL CCCCCHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCHHH YAPRAFVQQYAAVSQALVHAMVHALKWLQTASAADLMRVVPQDDLLGDRSTYMAAFHKVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH DTFSPDGMMPDDGPATALRALARLRPEWAASKVDLGRTYTNEYARKAKAKFNA HCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TPLSFSRRRLGAMALSLPLAGLAGARAQVLAPPFSAASQGRVRVAVGGAGLLYYLPLTV CCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHH AWQLGFFRAEGLDVAIRDYAGGALALQAVEQGEADVCCGGYDHTLRRQLQGQDYCALVLQ HHHHHHEEECCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEEEEE GRAPQLAFAASARNWPVRSVQSFKGLRVGVTAPGSSTHMLAQLALSQNGASLEGISFIGV CCCCCEEEECCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE GASGRGALAALRQGRVHALCHADPVVSVLEQHGEVRLLCDTRTLKASQELFGGTMPASSL CCCCCHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCHHH YAPRAFVQQYAAVSQALVHAMVHALKWLQTASAADLMRVVPQDDLLGDRSTYMAAFHKVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH DTFSPDGMMPDDGPATALRALARLRPEWAASKVDLGRTYTNEYARKAKAKFNA HCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA