| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611265
Identifier: 120611265
GI number: 120611265
Start: 2843698
End: 2844693
Strand: Direct
Name: 120611265
Synonym: Aave_2597
Alternate gene names: NA
Gene position: 2843698-2844693 (Clockwise)
Preceding gene: 120611264
Following gene: 120611273
Centisome position: 53.13
GC content: 69.88
Gene sequence:
>996_bases ATGCAGCGCAGAACCTTCACCCTCCATGCCCTGGCCCTTGGTGCAGGTGCCGCCCTGGGCGCCGTGCCGGCCCTGGCCCA GGCCCCATGGCCCACGGGCAAGACCATCACCTACCTGGTGCCGTTCGCGGCGGGCGGCACGACCGACACGCTGGGCCGGC TGGTCAGCCAGCAGCTGGGAACGGCCCTGGGCACCACGGTGGTGGTGGACAACAAGGGCGGGGCGGGTGGCAGCGTGGGC TCCGAGATCGCGGCGCGGGCCGCCCCGGACGGCTACACGCTGCTGGGGGGCACCATCAGCTCGCATGCGATCAACGTGAG CCTCTATCCGAAGCTGGGCTACGACCCCGTCAAATCCTTCGCGCCCGTCACGCTGATCGGCACCAACCCGGTGGTGCTCG TGGTGGCCGCCGGCAGCCCCTACAAGACGCTGCAGGACGTGCTCGCGGCGGCGAAGGCCAGGCCCGGCGGGCTCTCTTCG GCCTCGGCCGGTACGGGCACCTCGCAGCACCTGGCCCTGGAACTGCTGGCCTACAAGTCGGGCGTGAAGTTCACCCACGT GCCCTACAAGGGCAGCGGGCCGGCAATCCAGGACGTCATCGGCGGCCAGGTGGACATGATGTTCGACACCACCGTGGTCG CGGCGCCGCACATCCAGAGCGGCAAGCTGCGCGCGATCGCCGTCACCTCGGCGAAGCGGCTGGCATCCATGCCCGACGTG CCCACGGTGGCCGAATCGGGCGTGGCCGGCCTGAAGGACTTCGAGGTGGTGTCCTGGCAGGCGATCTTCGTGCCCGCGGA AACGCCCGCGCCCATCGTCAGCCGCCTGCACGACGAAATCCGCAAGATCCTCGCCCAGCCCGACATGCAGGCCAGGCTCA AGGGTTTCGGCATGGAGCCGGCGGACCTGTCCACCGCCCGGATCGCGGCCTTCCAGAAGGCCGAGGTCGAGAAATGGGCC CAGGTCATCAAGGCCGCGAACGTGAAGGTGGACTGA
Upstream 100 bases:
>100_bases TGGCCGCCAGCCATTCGATCTACGCGCTTTACGTCGAGGCGCGCGGCGCGGCCTGAGGCGTCGCGGCCCGGAATCTTTTC ACAACAAGGAGACAACCACC
Downstream 100 bases:
>100_bases AGTCAGGGCAGCTGCGCGCGCAGCCCCACCATGATGCGCCGGCCGGCCGCGGGCTCGAAGAAGCGGCCGTTGCCGTCGTT GACGATCAGCGAGCCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MQRRTFTLHALALGAGAALGAVPALAQAPWPTGKTITYLVPFAAGGTTDTLGRLVSQQLGTALGTTVVVDNKGGAGGSVG SEIAARAAPDGYTLLGGTISSHAINVSLYPKLGYDPVKSFAPVTLIGTNPVVLVVAAGSPYKTLQDVLAAAKARPGGLSS ASAGTGTSQHLALELLAYKSGVKFTHVPYKGSGPAIQDVIGGQVDMMFDTTVVAAPHIQSGKLRAIAVTSAKRLASMPDV PTVAESGVAGLKDFEVVSWQAIFVPAETPAPIVSRLHDEIRKILAQPDMQARLKGFGMEPADLSTARIAAFQKAEVEKWA QVIKAANVKVD
Sequences:
>Translated_331_residues MQRRTFTLHALALGAGAALGAVPALAQAPWPTGKTITYLVPFAAGGTTDTLGRLVSQQLGTALGTTVVVDNKGGAGGSVG SEIAARAAPDGYTLLGGTISSHAINVSLYPKLGYDPVKSFAPVTLIGTNPVVLVVAAGSPYKTLQDVLAAAKARPGGLSS ASAGTGTSQHLALELLAYKSGVKFTHVPYKGSGPAIQDVIGGQVDMMFDTTVVAAPHIQSGKLRAIAVTSAKRLASMPDV PTVAESGVAGLKDFEVVSWQAIFVPAETPAPIVSRLHDEIRKILAQPDMQARLKGFGMEPADLSTARIAAFQKAEVEKWA QVIKAANVKVD >Mature_331_residues MQRRTFTLHALALGAGAALGAVPALAQAPWPTGKTITYLVPFAAGGTTDTLGRLVSQQLGTALGTTVVVDNKGGAGGSVG SEIAARAAPDGYTLLGGTISSHAINVSLYPKLGYDPVKSFAPVTLIGTNPVVLVVAAGSPYKTLQDVLAAAKARPGGLSS ASAGTGTSQHLALELLAYKSGVKFTHVPYKGSGPAIQDVIGGQVDMMFDTTVVAAPHIQSGKLRAIAVTSAKRLASMPDV PTVAESGVAGLKDFEVVSWQAIFVPAETPAPIVSRLHDEIRKILAQPDMQARLKGFGMEPADLSTARIAAFQKAEVEKWA QVIKAANVKVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34027; Mature: 34027
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRTFTLHALALGAGAALGAVPALAQAPWPTGKTITYLVPFAAGGTTDTLGRLVSQQLG CCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH TALGTTVVVDNKGGAGGSVGSEIAARAAPDGYTLLGGTISSHAINVSLYPKLGYDPVKSF HHHCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHC APVTLIGTNPVVLVVAAGSPYKTLQDVLAAAKARPGGLSSASAGTGTSQHLALELLAYKS CCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEHHHC GVKFTHVPYKGSGPAIQDVIGGQVDMMFDTTVVAAPHIQSGKLRAIAVTSAKRLASMPDV CCEEEECCCCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHCCCCC PTVAESGVAGLKDFEVVSWQAIFVPAETPAPIVSRLHDEIRKILAQPDMQARLKGFGMEP CCHHHCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC ADLSTARIAAFQKAEVEKWAQVIKAANVKVD CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRRTFTLHALALGAGAALGAVPALAQAPWPTGKTITYLVPFAAGGTTDTLGRLVSQQLG CCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH TALGTTVVVDNKGGAGGSVGSEIAARAAPDGYTLLGGTISSHAINVSLYPKLGYDPVKSF HHHCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHC APVTLIGTNPVVLVVAAGSPYKTLQDVLAAAKARPGGLSSASAGTGTSQHLALELLAYKS CCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHEEHHHC GVKFTHVPYKGSGPAIQDVIGGQVDMMFDTTVVAAPHIQSGKLRAIAVTSAKRLASMPDV CCEEEECCCCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHCCCCC PTVAESGVAGLKDFEVVSWQAIFVPAETPAPIVSRLHDEIRKILAQPDMQARLKGFGMEP CCHHHCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC ADLSTARIAAFQKAEVEKWAQVIKAANVKVD CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]