Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611085
Identifier: 120611085
GI number: 120611085
Start: 2633869
End: 2634213
Strand: Reverse
Name: 120611085
Synonym: Aave_2414
Alternate gene names: NA
Gene position: 2634213-2633869 (Counterclockwise)
Preceding gene: 120611088
Following gene: 120611084
Centisome position: 49.21
GC content: 65.8
Gene sequence:
>345_bases ATGGCATCGAATCAAGGCAATCAAGGCAACCAAGGCAATAACCAAGGCAACCAGGGTGGCGGTTCCGGCCGCGGATTCGC CGGCATGGACCCCGAGCGCCAACGCGAGATCGCCGCTGAAGGCGGACGCGCAGCGCACGCAAGCGGCAATGCCCACGAGT TCACCTCCGAGGAAGCACGCCGCGCAGGCAGCATGAGCCACGGCGGCGGCGGCAACAACAACCAGCAGAACAGCAGTGGC GGCAGCCAGAACAGCGGCAACAGCCAGAACAGCGGCGGTACCCGTGGCGGCAGCAGCGAACAGCATGCGCAGGCCGGCCG CCAAAGCCACAAGAACGACCGTTGA
Upstream 100 bases:
>100_bases CCGGCGCATGGCATGTCCGTTGCCCCCTGCCTCATCGACAGCGCTGCACTGCGCGGTCACTTCCAACTCACCATTCGTTA TGTTCCAAAGGAGAAATCAC
Downstream 100 bases:
>100_bases GCGACACTCCGAGCCGGCCCGCAGGCCGGGACCGCATCGCCCCACGGGTCGATGCAGTTCCGGGTGACGCGGGGCATGCG CACCCCAAGGCCCACCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MASNQGNQGNQGNNQGNQGGGSGRGFAGMDPERQREIAAEGGRAAHASGNAHEFTSEEARRAGSMSHGGGGNNNQQNSSG GSQNSGNSQNSGGTRGGSSEQHAQAGRQSHKNDR
Sequences:
>Translated_114_residues MASNQGNQGNQGNNQGNQGGGSGRGFAGMDPERQREIAAEGGRAAHASGNAHEFTSEEARRAGSMSHGGGGNNNQQNSSG GSQNSGNSQNSGGTRGGSSEQHAQAGRQSHKNDR >Mature_113_residues ASNQGNQGNQGNNQGNQGGGSGRGFAGMDPERQREIAAEGGRAAHASGNAHEFTSEEARRAGSMSHGGGGNNNQQNSSGG SQNSGNSQNSGGTRGGSSEQHAQAGRQSHKNDR
Specific function: Unknown
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11492; Mature: 11361
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNQGNQGNQGNNQGNQGGGSGRGFAGMDPERQREIAAEGGRAAHASGNAHEFTSEEAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAGSMSHGGGGNNNQQNSSGGSQNSGNSQNSGGTRGGSSEQHAQAGRQSHKNDR HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ASNQGNQGNQGNNQGNQGGGSGRGFAGMDPERQREIAAEGGRAAHASGNAHEFTSEEAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAGSMSHGGGGNNNQQNSSGGSQNSGNSQNSGGTRGGSSEQHAQAGRQSHKNDR HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA