Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611028
Identifier: 120611028
GI number: 120611028
Start: 2577221
End: 2577643
Strand: Direct
Name: 120611028
Synonym: Aave_2357
Alternate gene names: NA
Gene position: 2577221-2577643 (Clockwise)
Preceding gene: 120611027
Following gene: 120611029
Centisome position: 48.15
GC content: 65.01
Gene sequence:
>423_bases ATGACTACCACCCCAACGCCACGGGGCATACGCAACCACAACCCCGGAAACATCGATCGAACCACCGAACGGTGGCAAGG CATGGCCGCGGACCAGAGTAGCGATCCGCGGTTCGTGGTGTTTTCGGCACCGATCTGGGGTCTGCGCGCGTTGGCCAAGG TGCTGCTCTCGTACCAGCGGAAGTACGGCCTCAATACCCCTGCCAAGATCATCGGCCGCTGGGCGCCGCCCAGCGAAAAC GACACCGGGTCCTATGCGCGTCAGGTCGCCCGAGCCCTGGGCGTAGGCGTCGATGACGTGGTGGACCTCCAGGACGCGAA CCTGCTCGCGCGCATCGTGTCGGCGATCGTCGGGCACGAGAACGGACAGCAACCGTATCCCGATGACCTCATCGAACAGG CCGTGCGCCTGGCGCTGGAGTGA
Upstream 100 bases:
>100_bases ACCGCGGCCCCGTGGACGTAATCGACAACGTGCACCGCACACAGGCGGCCAGCGACAGATTGGCGGTGCTGCTGGCCGCC GCCATTGAAAGGTCCATCCG
Downstream 100 bases:
>100_bases TGCCGATGGATTCGCCGGACTTGAACAATTTTCCAGGCGGGCCATTCGGTGCTCTGGGCGCCGGGATGACAGCTATCGCG AGTGGCTTCCTGTTCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTTTPTPRGIRNHNPGNIDRTTERWQGMAADQSSDPRFVVFSAPIWGLRALAKVLLSYQRKYGLNTPAKIIGRWAPPSEN DTGSYARQVARALGVGVDDVVDLQDANLLARIVSAIVGHENGQQPYPDDLIEQAVRLALE
Sequences:
>Translated_140_residues MTTTPTPRGIRNHNPGNIDRTTERWQGMAADQSSDPRFVVFSAPIWGLRALAKVLLSYQRKYGLNTPAKIIGRWAPPSEN DTGSYARQVARALGVGVDDVVDLQDANLLARIVSAIVGHENGQQPYPDDLIEQAVRLALE >Mature_139_residues TTTPTPRGIRNHNPGNIDRTTERWQGMAADQSSDPRFVVFSAPIWGLRALAKVLLSYQRKYGLNTPAKIIGRWAPPSEND TGSYARQVARALGVGVDDVVDLQDANLLARIVSAIVGHENGQQPYPDDLIEQAVRLALE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15377; Mature: 15245
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPTPRGIRNHNPGNIDRTTERWQGMAADQSSDPRFVVFSAPIWGLRALAKVLLSYQR CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH KYGLNTPAKIIGRWAPPSENDTGSYARQVARALGVGVDDVVDLQDANLLARIVSAIVGHE HCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCC NGQQPYPDDLIEQAVRLALE CCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTTPTPRGIRNHNPGNIDRTTERWQGMAADQSSDPRFVVFSAPIWGLRALAKVLLSYQR CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH KYGLNTPAKIIGRWAPPSENDTGSYARQVARALGVGVDDVVDLQDANLLARIVSAIVGHE HCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCC NGQQPYPDDLIEQAVRLALE CCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA