Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611026
Identifier: 120611026
GI number: 120611026
Start: 2574196
End: 2576535
Strand: Direct
Name: 120611026
Synonym: Aave_2355
Alternate gene names: NA
Gene position: 2574196-2576535 (Clockwise)
Preceding gene: 120611025
Following gene: 120611027
Centisome position: 48.09
GC content: 66.24
Gene sequence:
>2340_bases ATGTCCGCTCTTGAGGTGCGCGTCCATCGCCGCACGGGGGTGGGCGAGCACATCCTGAACGATGCGCCGCTGGAGTTCGA CCAGGACGAGGACGGGAAAGAGCCGCATCCGCTGGACGGGCCGGAAGCGCGGGCGACCCTGAAGAAGTGCCTGGGCTGGT ACTACCGCGAGCGCGACATTCAGGCCGTGAACCGCATGGACATGGCGATCGACGCCGATATGTACGACGGCGACCAGTGG GACCCCGCCGACGCGGCGGTGCTGGAGGAGCGCGGCCAGGTGCCCCTGGTGTTCAACGAAGTGGCGCCGATGGCGGACTG GATGATCGGCACGGAGCGCCGGTCGCGCGTGGACTGGAGCGTCCTGCCGCGCACCGAGGACGACGTGCAGATGGCCGACG TGAAGACCAAGGTGATGAAGTACGTCACCGACGTGAACCGGTCCGCCTTCAACCGCTCGCGCGCCTTCGAGGACGCTGTG AAAGTCGGTATCGGCTGGGTCGATTCCGGCGTGCGCAACGACCCGACCAAGGACATCATTTACGACAAGTACGAGGACTG GCGGAACGTGCTGTGGGACTCCATGGCCATCGAGATGGACCTGAGCGATGCCCGCTACGTCTTCCGCACGCGATGGGTGG ATGACGATGTGGCCGCGGCCATGTACCCGGAGCGGGCAGACGTGGTGCGCCGGGCCGTGCAGCATGACCGCGACTACAAC GCCCAGCAGTGGGCGGAAGACGAATTCAACTACCAGGGCTATGCGGGCTCGACGCGCAGCGGCAGCTACATGGCCAGCGG GCAAAGCTCGGCGGACAGTGAGCCGCGCCGCAGGGTGCGGCTGATCGAATGCCAGTTCCGCATGCCCGTGCAGGCGCGCG TGGTGGTCACCGGCCCGTTCAAGGGCTCGATCGTAGAACCCTGGGACAACGCCCTGCAGGCGGTGGTGGCCGCATTCGGG GGCTCCGTCGTGGACCGCGTGCTGATGCGGATGCACATCGCCGTCTTCACGGAAGGCCACCTCCTAGCGCTGGGCCCGAT GCCAATGCGGCACAACAGTTTCAGCCTGACCCCGATCTGGTGCTACCGCCGCGGCCGAGACCGGCAGCCTTACGGCGTGA TCCGCCGCGTGCGGGATCTGCAGGCCGACCTGAACAAGCGCGCGAGCAAGGCGCTGTTCGCTCTGAGCACGAACCAGATT TTTGCCGAGCACGGCGCGGTGGACGACATCAATGAGACGCGCGAGGAGGCAAACCAGCCGGACGGCGTGATCCTCTACAA GGCGGGGAAGAAGCTGGAGGTCCACCGGGACTCCGAGATGGCGGCGGGACAGGTGCAGATGATGACCATGGACGCCCAGG CCATCCAGCGCAACGCGGGCATCTCAAACGAGAACCTGGGCCGGCAGACCAACGCAAGCAGCGGCGAGGCGATCAAGGCC CGGCAGATGCAGGGAAGCGTGGTCACGACCCAGCCCTTCGACAACTTGCGGTTCGCGACCCAGACCCAAGGCGAGAAGCT GCTGTCTCTCATCGAGCAGTGGTACACGGAAGAGAAGGTCATCCGGCTGTCCGGCCACAAGGGAAAGCTCGACTGGGTGA AGATCAATCAGCCCGAGCAGCAGGCCGACGGTTCGGTGCGCTACCTGAACGACATCACGGCCAGCGTTGCGGATTTCGTG GTGTCCGAACAGGACTATGCCGGCACGCTGCGCCAGGTGATGTACGAGTCCATGGTGAACTTGGCCGGCCGCATGGATCC CGCGACGGCCATGCGCCTGATGACGCTGGCCATGGACTACTCGGACCTGCCCAACCACGAGCAGATGGCTGCCGAAATGC GCAAGCTGACCGGCGAGCGCGACCCGAATAAGCCCCTCACGCCCGAGGAGCAGCAGCAAATGCAGCAGCAGATGCAGGCC CAGGCGGAGGCGCTGCAGATGCAGCAGGCCACGGCGCGTGCGGCGCTGGACGAGCAGTTGGCACGCGTCCGCGAGGTCAA CGCCCGCGCCCAGAAGATGGAAGCAGAGGCCGAGCAGCTGCGTGCTGGCGGGGATGGAGCCCAGGCGCAGCAACTGGAGG GCGTGGCCGCCACGGTCCGCCGCGATGCGGACCTGGAGCTGGAAAACGTGCGCCGCCAGCTCGCCAAGGCGCAGGCCGAC CTGGCCAACAAAACCCTGCAGATCAAGGCTGACGGCGACGTGCGCATGCAGGTTGCCCGGATCGAAGCCGATTCGCGCGA GCGTGTCGCCGAGATCCAGGCGGCGAGCAAGGAGCGGCTGCAAGCCATGGACGAACGGCTGGCCGCATTCGAGGCGGCGC CTCAGGAGAAAACTGCATGA
Upstream 100 bases:
>100_bases TGGGAGCGCGCGGGCCAGGAAATAGGCACGCTGATCGCGAAGCTCGACGGCAAGGAGATCGCGTCCGAGGCTGTGGTGAT CGAGGACAAGGGGGCGGAAT
Downstream 100 bases:
>100_bases ACTGGCTTCAATACCTCTTCCTTCTGCCTGCCGTCTTCGCGATGGTGTTGGGGCTTCTCGTGGGCTGCGGCGGTGGTGGC GGTGGGGGTTCCACGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MSALEVRVHRRTGVGEHILNDAPLEFDQDEDGKEPHPLDGPEARATLKKCLGWYYRERDIQAVNRMDMAIDADMYDGDQW DPADAAVLEERGQVPLVFNEVAPMADWMIGTERRSRVDWSVLPRTEDDVQMADVKTKVMKYVTDVNRSAFNRSRAFEDAV KVGIGWVDSGVRNDPTKDIIYDKYEDWRNVLWDSMAIEMDLSDARYVFRTRWVDDDVAAAMYPERADVVRRAVQHDRDYN AQQWAEDEFNYQGYAGSTRSGSYMASGQSSADSEPRRRVRLIECQFRMPVQARVVVTGPFKGSIVEPWDNALQAVVAAFG GSVVDRVLMRMHIAVFTEGHLLALGPMPMRHNSFSLTPIWCYRRGRDRQPYGVIRRVRDLQADLNKRASKALFALSTNQI FAEHGAVDDINETREEANQPDGVILYKAGKKLEVHRDSEMAAGQVQMMTMDAQAIQRNAGISNENLGRQTNASSGEAIKA RQMQGSVVTTQPFDNLRFATQTQGEKLLSLIEQWYTEEKVIRLSGHKGKLDWVKINQPEQQADGSVRYLNDITASVADFV VSEQDYAGTLRQVMYESMVNLAGRMDPATAMRLMTLAMDYSDLPNHEQMAAEMRKLTGERDPNKPLTPEEQQQMQQQMQA QAEALQMQQATARAALDEQLARVREVNARAQKMEAEAEQLRAGGDGAQAQQLEGVAATVRRDADLELENVRRQLAKAQAD LANKTLQIKADGDVRMQVARIEADSRERVAEIQAASKERLQAMDERLAAFEAAPQEKTA
Sequences:
>Translated_779_residues MSALEVRVHRRTGVGEHILNDAPLEFDQDEDGKEPHPLDGPEARATLKKCLGWYYRERDIQAVNRMDMAIDADMYDGDQW DPADAAVLEERGQVPLVFNEVAPMADWMIGTERRSRVDWSVLPRTEDDVQMADVKTKVMKYVTDVNRSAFNRSRAFEDAV KVGIGWVDSGVRNDPTKDIIYDKYEDWRNVLWDSMAIEMDLSDARYVFRTRWVDDDVAAAMYPERADVVRRAVQHDRDYN AQQWAEDEFNYQGYAGSTRSGSYMASGQSSADSEPRRRVRLIECQFRMPVQARVVVTGPFKGSIVEPWDNALQAVVAAFG GSVVDRVLMRMHIAVFTEGHLLALGPMPMRHNSFSLTPIWCYRRGRDRQPYGVIRRVRDLQADLNKRASKALFALSTNQI FAEHGAVDDINETREEANQPDGVILYKAGKKLEVHRDSEMAAGQVQMMTMDAQAIQRNAGISNENLGRQTNASSGEAIKA RQMQGSVVTTQPFDNLRFATQTQGEKLLSLIEQWYTEEKVIRLSGHKGKLDWVKINQPEQQADGSVRYLNDITASVADFV VSEQDYAGTLRQVMYESMVNLAGRMDPATAMRLMTLAMDYSDLPNHEQMAAEMRKLTGERDPNKPLTPEEQQQMQQQMQA QAEALQMQQATARAALDEQLARVREVNARAQKMEAEAEQLRAGGDGAQAQQLEGVAATVRRDADLELENVRRQLAKAQAD LANKTLQIKADGDVRMQVARIEADSRERVAEIQAASKERLQAMDERLAAFEAAPQEKTA >Mature_778_residues SALEVRVHRRTGVGEHILNDAPLEFDQDEDGKEPHPLDGPEARATLKKCLGWYYRERDIQAVNRMDMAIDADMYDGDQWD PADAAVLEERGQVPLVFNEVAPMADWMIGTERRSRVDWSVLPRTEDDVQMADVKTKVMKYVTDVNRSAFNRSRAFEDAVK VGIGWVDSGVRNDPTKDIIYDKYEDWRNVLWDSMAIEMDLSDARYVFRTRWVDDDVAAAMYPERADVVRRAVQHDRDYNA QQWAEDEFNYQGYAGSTRSGSYMASGQSSADSEPRRRVRLIECQFRMPVQARVVVTGPFKGSIVEPWDNALQAVVAAFGG SVVDRVLMRMHIAVFTEGHLLALGPMPMRHNSFSLTPIWCYRRGRDRQPYGVIRRVRDLQADLNKRASKALFALSTNQIF AEHGAVDDINETREEANQPDGVILYKAGKKLEVHRDSEMAAGQVQMMTMDAQAIQRNAGISNENLGRQTNASSGEAIKAR QMQGSVVTTQPFDNLRFATQTQGEKLLSLIEQWYTEEKVIRLSGHKGKLDWVKINQPEQQADGSVRYLNDITASVADFVV SEQDYAGTLRQVMYESMVNLAGRMDPATAMRLMTLAMDYSDLPNHEQMAAEMRKLTGERDPNKPLTPEEQQQMQQQMQAQ AEALQMQQATARAALDEQLARVREVNARAQKMEAEAEQLRAGGDGAQAQQLEGVAATVRRDADLELENVRRQLAKAQADL ANKTLQIKADGDVRMQVARIEADSRERVAEIQAASKERLQAMDERLAAFEAAPQEKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87933; Mature: 87802
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALEVRVHRRTGVGEHILNDAPLEFDQDEDGKEPHPLDGPEARATLKKCLGWYYRERDI CCCEEEEEEHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QAVNRMDMAIDADMYDGDQWDPADAAVLEERGQVPLVFNEVAPMADWMIGTERRSRVDWS HHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHCCCCCE VLPRTEDDVQMADVKTKVMKYVTDVNRSAFNRSRAFEDAVKVGIGWVDSGVRNDPTKDII ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH YDKYEDWRNVLWDSMAIEMDLSDARYVFRTRWVDDDVAAAMYPERADVVRRAVQHDRDYN HHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCC AQQWAEDEFNYQGYAGSTRSGSYMASGQSSADSEPRRRVRLIECQFRMPVQARVVVTGPF HHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHEEEEEEEECCCCEEEEEEECCC KGSIVEPWDNALQAVVAAFGGSVVDRVLMRMHIAVFTEGHLLALGPMPMRHNSFSLTPIW CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCCCCCCCEEE CYRRGRDRQPYGVIRRVRDLQADLNKRASKALFALSTNQIFAEHGAVDDINETREEANQP EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCHHHHHHHCCCC DGVILYKAGKKLEVHRDSEMAAGQVQMMTMDAQAIQRNAGISNENLGRQTNASSGEAIKA CCEEEEECCCEEEEECCCCCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHH RQMQGSVVTTQPFDNLRFATQTQGEKLLSLIEQWYTEEKVIRLSGHKGKLDWVKINQPEQ HHHCCCEEEECCCCCCEEHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHH QADGSVRYLNDITASVADFVVSEQDYAGTLRQVMYESMVNLAGRMDPATAMRLMTLAMDY HCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC SDLPNHEQMAAEMRKLTGERDPNKPLTPEEQQQMQQQMQAQAEALQMQQATARAALDEQL CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVREVNARAQKMEAEAEQLRAGGDGAQAQQLEGVAATVRRDADLELENVRRQLAKAQAD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LANKTLQIKADGDVRMQVARIEADSRERVAEIQAASKERLQAMDERLAAFEAAPQEKTA HCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SALEVRVHRRTGVGEHILNDAPLEFDQDEDGKEPHPLDGPEARATLKKCLGWYYRERDI CCEEEEEEHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QAVNRMDMAIDADMYDGDQWDPADAAVLEERGQVPLVFNEVAPMADWMIGTERRSRVDWS HHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHCCCCCE VLPRTEDDVQMADVKTKVMKYVTDVNRSAFNRSRAFEDAVKVGIGWVDSGVRNDPTKDII ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH YDKYEDWRNVLWDSMAIEMDLSDARYVFRTRWVDDDVAAAMYPERADVVRRAVQHDRDYN HHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCC AQQWAEDEFNYQGYAGSTRSGSYMASGQSSADSEPRRRVRLIECQFRMPVQARVVVTGPF HHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHEEEEEEEECCCCEEEEEEECCC KGSIVEPWDNALQAVVAAFGGSVVDRVLMRMHIAVFTEGHLLALGPMPMRHNSFSLTPIW CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEECCCCCCCCCCCCCEEE CYRRGRDRQPYGVIRRVRDLQADLNKRASKALFALSTNQIFAEHGAVDDINETREEANQP EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCHHHHHHHCCCC DGVILYKAGKKLEVHRDSEMAAGQVQMMTMDAQAIQRNAGISNENLGRQTNASSGEAIKA CCEEEEECCCEEEEECCCCCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHH RQMQGSVVTTQPFDNLRFATQTQGEKLLSLIEQWYTEEKVIRLSGHKGKLDWVKINQPEQ HHHCCCEEEECCCCCCEEHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHH QADGSVRYLNDITASVADFVVSEQDYAGTLRQVMYESMVNLAGRMDPATAMRLMTLAMDY HCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC SDLPNHEQMAAEMRKLTGERDPNKPLTPEEQQQMQQQMQAQAEALQMQQATARAALDEQL CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVREVNARAQKMEAEAEQLRAGGDGAQAQQLEGVAATVRRDADLELENVRRQLAKAQAD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LANKTLQIKADGDVRMQVARIEADSRERVAEIQAASKERLQAMDERLAAFEAAPQEKTA HCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA