Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611014
Identifier: 120611014
GI number: 120611014
Start: 2566325
End: 2567464
Strand: Direct
Name: 120611014
Synonym: Aave_2343
Alternate gene names: NA
Gene position: 2566325-2567464 (Clockwise)
Preceding gene: 120611013
Following gene: 120611015
Centisome position: 47.94
GC content: 70.88
Gene sequence:
>1140_bases ATGACTACGAAGAAGGCCCGCACGCAGTTGCTGCAGGCGCTGACGGCTGCCGGGGGCTCCGCCCGCGAGAGCGAGCTGCG CGCCGCGACGGGCTGGGACGCTGAGCGCCTGGCCATCGTGTTGGAAGACGCGCGCGAGCGCCTGCTGGCCCGGCCGGTCG CCACGAAGCCCCAGAAGGACACCGCATGGGTGGCCGTGGACGTGCTGATCGCACGGTGCCCCTGGAAGCCTGCCCGAATC CTCAAGGCCCTTACCGGCCAGGAGATGAGCACCCGCGAGCTGGCGGAGCTGGCACAGTCCCCAGAGCTGGCAATGGGGCT GGTGCTGCGCAGGATGGCGCGGGCCCAGCGGATCAAGCTGGCGGCGTTCAATGGACATCGGAAGTGGGTGCCCTTCGGCC GCTACATCGCGCCCGGGGGCTCGCGGCCCGAGCCCTACGACGGTGATCTGCTCGCGTTGATCGCCCAGCACCAGCCCATG CGGCTGGAGCACCTGGCGGAGCTGACGGGGCGCGGCCGCGTGTACACCCGGCAGCGCGTGCACAAGCTGCGCCGCGCGGG CAAGGTCAACATCCGCGGCGTGGACGGCAGCTGGCGCTACGTGCTGCCGGACTACGTGCGCACGCCCGCCGACATCGAGC AGGAAATCCTGCTGCGGTGCGAGCCAGTGGGATGCGACTGCCTGCGCTGGAGCGGCGCGCGCAGCCCGCAGGGCCACCCC CTGACGCGCCACGACGGCAACGTCAAACGCGTGGACATCGTGCTGTGGACGGCCGTGCACGGGAAAGAGCTGAAGAAAGG CCACACGCTCACCGGGACGTGCGAGACGCCGGGCTGCTGCAACCATGAGCACCACAAGCAGGTGACGCGCGGCGCTGCGA TGCGCAAGGCCTTCGCCTCCATCGGCTTCGGCGGCGAAAAGCATGGCCGGCTGGTGTCGGCCGCCATCCGGCACAAGGTC GGGTCGCTGTCCCCCGAGCAGGTGGAGCTGATCCGCACCAGCCCCCTCACGGGTGCCGAGCTGGCGCGCCAGTTGGGGAA GACCAAATCGGTGGTGCAGGACGCCCGCGCCGGCCGGAGCTATCGCGACTACGTGGTGGCGAGCCCGTTCGCGGGGCTGG GCGGGAGGTCGGCATGCTGA
Upstream 100 bases:
>100_bases GGAAACGGGCGAGTGGGTCACTGTGGACGTGGCCCAAAAGGAGGCGAGCCATGGCTGAAGTGCTCGCCCTGGCTGCGAAC TCGCGCGAGAGGGGGCATGC
Downstream 100 bases:
>100_bases AGCGACCGAAGCCCCTGATCCGCTTCGTGGGCGGCCGGTGGATATGCGTGGAGCGTGGGTTGTTCGCCTTGTCCATCACC GGCTGCGGTGCAACGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTTKKARTQLLQALTAAGGSARESELRAATGWDAERLAIVLEDARERLLARPVATKPQKDTAWVAVDVLIARCPWKPARI LKALTGQEMSTRELAELAQSPELAMGLVLRRMARAQRIKLAAFNGHRKWVPFGRYIAPGGSRPEPYDGDLLALIAQHQPM RLEHLAELTGRGRVYTRQRVHKLRRAGKVNIRGVDGSWRYVLPDYVRTPADIEQEILLRCEPVGCDCLRWSGARSPQGHP LTRHDGNVKRVDIVLWTAVHGKELKKGHTLTGTCETPGCCNHEHHKQVTRGAAMRKAFASIGFGGEKHGRLVSAAIRHKV GSLSPEQVELIRTSPLTGAELARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC
Sequences:
>Translated_379_residues MTTKKARTQLLQALTAAGGSARESELRAATGWDAERLAIVLEDARERLLARPVATKPQKDTAWVAVDVLIARCPWKPARI LKALTGQEMSTRELAELAQSPELAMGLVLRRMARAQRIKLAAFNGHRKWVPFGRYIAPGGSRPEPYDGDLLALIAQHQPM RLEHLAELTGRGRVYTRQRVHKLRRAGKVNIRGVDGSWRYVLPDYVRTPADIEQEILLRCEPVGCDCLRWSGARSPQGHP LTRHDGNVKRVDIVLWTAVHGKELKKGHTLTGTCETPGCCNHEHHKQVTRGAAMRKAFASIGFGGEKHGRLVSAAIRHKV GSLSPEQVELIRTSPLTGAELARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC >Mature_378_residues TTKKARTQLLQALTAAGGSARESELRAATGWDAERLAIVLEDARERLLARPVATKPQKDTAWVAVDVLIARCPWKPARIL KALTGQEMSTRELAELAQSPELAMGLVLRRMARAQRIKLAAFNGHRKWVPFGRYIAPGGSRPEPYDGDLLALIAQHQPMR LEHLAELTGRGRVYTRQRVHKLRRAGKVNIRGVDGSWRYVLPDYVRTPADIEQEILLRCEPVGCDCLRWSGARSPQGHPL TRHDGNVKRVDIVLWTAVHGKELKKGHTLTGTCETPGCCNHEHHKQVTRGAAMRKAFASIGFGGEKHGRLVSAAIRHKVG SLSPEQVELIRTSPLTGAELARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41756; Mature: 41625
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: PS01286 FA58C_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKARTQLLQALTAAGGSARESELRAATGWDAERLAIVLEDARERLLARPVATKPQKD CCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TAWVAVDVLIARCPWKPARILKALTGQEMSTRELAELAQSPELAMGLVLRRMARAQRIKL CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE AAFNGHRKWVPFGRYIAPGGSRPEPYDGDLLALIAQHQPMRLEHLAELTGRGRVYTRQRV EEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH HKLRRAGKVNIRGVDGSWRYVLPDYVRTPADIEQEILLRCEPVGCDCLRWSGARSPQGHP HHHHHCCCCEEEECCCCCEEECHHHHCCCCCHHHHHHHCCCCCCCHHEECCCCCCCCCCC LTRHDGNVKRVDIVLWTAVHGKELKKGHTLTGTCETPGCCNHEHHKQVTRGAAMRKAFAS CCCCCCCEEEEEEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH IGFGGEKHGRLVSAAIRHKVGSLSPEQVELIRTSPLTGAELARQLGKTKSVVQDARAGRS HCCCCCCCCHHHHHHHHHHHCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC YRDYVVASPFAGLGGRSAC HHCEEEECCCCCCCCCCCC >Mature Secondary Structure TTKKARTQLLQALTAAGGSARESELRAATGWDAERLAIVLEDARERLLARPVATKPQKD CCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TAWVAVDVLIARCPWKPARILKALTGQEMSTRELAELAQSPELAMGLVLRRMARAQRIKL CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE AAFNGHRKWVPFGRYIAPGGSRPEPYDGDLLALIAQHQPMRLEHLAELTGRGRVYTRQRV EEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH HKLRRAGKVNIRGVDGSWRYVLPDYVRTPADIEQEILLRCEPVGCDCLRWSGARSPQGHP HHHHHCCCCEEEECCCCCEEECHHHHCCCCCHHHHHHHCCCCCCCHHEECCCCCCCCCCC LTRHDGNVKRVDIVLWTAVHGKELKKGHTLTGTCETPGCCNHEHHKQVTRGAAMRKAFAS CCCCCCCEEEEEEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH IGFGGEKHGRLVSAAIRHKVGSLSPEQVELIRTSPLTGAELARQLGKTKSVVQDARAGRS HCCCCCCCCHHHHHHHHHHHCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC YRDYVVASPFAGLGGRSAC HHCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA