Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611012
Identifier: 120611012
GI number: 120611012
Start: 2565005
End: 2565796
Strand: Direct
Name: 120611012
Synonym: Aave_2340
Alternate gene names: NA
Gene position: 2565005-2565796 (Clockwise)
Preceding gene: 120611011
Following gene: 120611013
Centisome position: 47.92
GC content: 69.19
Gene sequence:
>792_bases ATGCTGAACGAGAACGACATGGAATGGCTGCTGGAGCAGCTGGTGGGCACTGCCGAATTGCTCGGCTTCCCCATAACGCC CCCTGCGGCGGCGATGCTGGCCGATGACCTGAGCAGCTATCCGAAGGAGGTGCTGGGCCGGGCGCTGTCCCGCCTGCGGA ACGAGCACACCGGCCGCCTCACGCCGAAGTCGATCCTGGACCGCATCGATGAGGTTATGGGCCGGCCGGCTGCGAACGAG GCTTGGGCCCTGGCGGTCGAGGCGATGGACGAGCGGGCCACAGTTGTGTGGACCAACGAAATGTCGGATGCGTGGCTGGT GGCGAAGTCTCTCGCCGCCGAAGGCGACATGGTGGGCGCCCGCATGGCCTTCATCGCGGCCTACGAGCGGCTGGTGCGGA TTGCCCGCGACAGCCGCACCCCACCGGAGGTAAGCGTATCCCTGGGCTGGGACAAGGACGGCCGCGAGGTGGCGCTGGAC AAGGCGGTGCAGCTGGGCCGGATCAGCGCGGAGGCCGCGGACAAGCACCGCGTGCTGAAGCTCGCGGCGCCCGCCATCGA TGCCGTGGCGCTGCTGGAGGGCAAGGCGGTGGATTTTCCGGGCGCGCCGCCGAATGTGCGCGCCCGCCTGGCTGAACTGC GTGCAACCCTGGCCGACCGCCGGCGCGCGGACGAGGAAGCCCGCGATCGCGCAGTCCGGGAAGAACACCGCGCTCTGCAG GAGAGGAAGGCCGAGATTCAGCGCCAGGTGAACGAGCACTTGGCGGCCCAGCAGGCAGGAGGTGCAGCGTGA
Upstream 100 bases:
>100_bases CCAGCACCCGCGCCAAGCAGGTGGACCAATCCCAAGCCAACTACGACACGGCCGGTGAGGCCATGACGATCCTGCGGCAA CGCCGCGCGGAGGCGAACGC
Downstream 100 bases:
>100_bases CCCAGCAACCCGACGTCGGGCCGTCGCCTCGGCAACTGGAGGTGCTTGCCTTCATGCGCAAGTTCTTCACGGAGAACGAC CAGCTCCCGCCCGTGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLNENDMEWLLEQLVGTAELLGFPITPPAAAMLADDLSSYPKEVLGRALSRLRNEHTGRLTPKSILDRIDEVMGRPAANE AWALAVEAMDERATVVWTNEMSDAWLVAKSLAAEGDMVGARMAFIAAYERLVRIARDSRTPPEVSVSLGWDKDGREVALD KAVQLGRISAEAADKHRVLKLAAPAIDAVALLEGKAVDFPGAPPNVRARLAELRATLADRRRADEEARDRAVREEHRALQ ERKAEIQRQVNEHLAAQQAGGAA
Sequences:
>Translated_263_residues MLNENDMEWLLEQLVGTAELLGFPITPPAAAMLADDLSSYPKEVLGRALSRLRNEHTGRLTPKSILDRIDEVMGRPAANE AWALAVEAMDERATVVWTNEMSDAWLVAKSLAAEGDMVGARMAFIAAYERLVRIARDSRTPPEVSVSLGWDKDGREVALD KAVQLGRISAEAADKHRVLKLAAPAIDAVALLEGKAVDFPGAPPNVRARLAELRATLADRRRADEEARDRAVREEHRALQ ERKAEIQRQVNEHLAAQQAGGAA >Mature_263_residues MLNENDMEWLLEQLVGTAELLGFPITPPAAAMLADDLSSYPKEVLGRALSRLRNEHTGRLTPKSILDRIDEVMGRPAANE AWALAVEAMDERATVVWTNEMSDAWLVAKSLAAEGDMVGARMAFIAAYERLVRIARDSRTPPEVSVSLGWDKDGREVALD KAVQLGRISAEAADKHRVLKLAAPAIDAVALLEGKAVDFPGAPPNVRARLAELRATLADRRRADEEARDRAVREEHRALQ ERKAEIQRQVNEHLAAQQAGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28807; Mature: 28807
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNENDMEWLLEQLVGTAELLGFPITPPAAAMLADDLSSYPKEVLGRALSRLRNEHTGRL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPKSILDRIDEVMGRPAANEAWALAVEAMDERATVVWTNEMSDAWLVAKSLAAEGDMVGA CHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHH RMAFIAAYERLVRIARDSRTPPEVSVSLGWDKDGREVALDKAVQLGRISAEAADKHRVLK HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAAPAIDAVALLEGKAVDFPGAPPNVRARLAELRATLADRRRADEEARDRAVREEHRALQ HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERKAEIQRQVNEHLAAQQAGGAA HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNENDMEWLLEQLVGTAELLGFPITPPAAAMLADDLSSYPKEVLGRALSRLRNEHTGRL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPKSILDRIDEVMGRPAANEAWALAVEAMDERATVVWTNEMSDAWLVAKSLAAEGDMVGA CHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHH RMAFIAAYERLVRIARDSRTPPEVSVSLGWDKDGREVALDKAVQLGRISAEAADKHRVLK HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAAPAIDAVALLEGKAVDFPGAPPNVRARLAELRATLADRRRADEEARDRAVREEHRALQ HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERKAEIQRQVNEHLAAQQAGGAA HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA