Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611011
Identifier: 120611011
GI number: 120611011
Start: 2564109
End: 2565011
Strand: Direct
Name: 120611011
Synonym: Aave_2339
Alternate gene names: NA
Gene position: 2564109-2565011 (Clockwise)
Preceding gene: 120611010
Following gene: 120611012
Centisome position: 47.9
GC content: 64.01
Gene sequence:
>903_bases GTGACGGAAGGCCAATTCTCCCTGGTGCCTATCGAGGTGATTCTGGACAAGCGGCTGACGTTGGAGCAGACGCGTGTGCT GATCGCGCTCTTTTCGTTCCGGAACAAGGTCACGGACACCGTGTGGCCTTCCCGCGCGAAGATTTCCGAGCGCACCGGCA TGCACCCATCGAACATCAGCGCCGCCACCACCGCGCTGGTGGGGCTCGGCTGGCTGAAAAAGGTAGGCAGCGGTGGGCAC TCGAAGGCCAGCCGCTACACCTTGTGCAGCCCTGAAGAAACCGTAGCCGAACAGGCTACGGTAGCCCATCCGGCTACGGT AGCCGAAGAAGCTACGGTAGCCCAATCGGCTACGGTAGCCGATCCGGCTACCCCACCCGTAGCCCAATCGGCTACCCCCC CCGTAGCCGATGCGGCTAGGGGCAAAGAACAGACCATTGAACAGACCAATGAACTGACCATCTTGCAGCCGGCTGCGCCG ACCGCGCCGAAGGTCAAGGCCGAGCCGGTGGACGAGAAGGAAACCGCTCTGCAGGCTGCATGCCGGCAGACCTGGGCGGC GTACAGCGAGGCCTACCAGCGACGCTACAAGACCAAGCCCGTGCGCAATCAGGCGGTGAACGCCAAGGTGAAGCAGTTCG TGCAGCGCATCGGGCATGACGAATCACCGGCCGTGGCTGCCTTCTTCGTGGACGCCGTGAACGAGGCATTTGTCGTGCGC CTGGTCCACGACTTCGGCCAGCTCCTGACACGCGCCGAGGGCTACCGCACCCAGTGGTTCAACGGTGCGGCGATCACCAG CACCCGCGCCAAGCAGGTGGACCAATCCCAAGCCAACTACGACACGGCCGGTGAGGCCATGACGATCCTGCGGCAACGCC GCGCGGAGGCGAACGCATGCTGA
Upstream 100 bases:
>100_bases CGATCAAGCAGGGGCTGCTGGAGCCCGTGGGCTACGCGCCCAGGGTGAAGGGCCACGGTACGGCCGGCGGGCGCGTGTAC GCCCGCGGGAGGTCGCTCGC
Downstream 100 bases:
>100_bases ACGAGAACGACATGGAATGGCTGCTGGAGCAGCTGGTGGGCACTGCCGAATTGCTCGGCTTCCCCATAACGCCCCCTGCG GCGGCGATGCTGGCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTEGQFSLVPIEVILDKRLTLEQTRVLIALFSFRNKVTDTVWPSRAKISERTGMHPSNISAATTALVGLGWLKKVGSGGH SKASRYTLCSPEETVAEQATVAHPATVAEEATVAQSATVADPATPPVAQSATPPVADAARGKEQTIEQTNELTILQPAAP TAPKVKAEPVDEKETALQAACRQTWAAYSEAYQRRYKTKPVRNQAVNAKVKQFVQRIGHDESPAVAAFFVDAVNEAFVVR LVHDFGQLLTRAEGYRTQWFNGAAITSTRAKQVDQSQANYDTAGEAMTILRQRRAEANAC
Sequences:
>Translated_300_residues MTEGQFSLVPIEVILDKRLTLEQTRVLIALFSFRNKVTDTVWPSRAKISERTGMHPSNISAATTALVGLGWLKKVGSGGH SKASRYTLCSPEETVAEQATVAHPATVAEEATVAQSATVADPATPPVAQSATPPVADAARGKEQTIEQTNELTILQPAAP TAPKVKAEPVDEKETALQAACRQTWAAYSEAYQRRYKTKPVRNQAVNAKVKQFVQRIGHDESPAVAAFFVDAVNEAFVVR LVHDFGQLLTRAEGYRTQWFNGAAITSTRAKQVDQSQANYDTAGEAMTILRQRRAEANAC >Mature_299_residues TEGQFSLVPIEVILDKRLTLEQTRVLIALFSFRNKVTDTVWPSRAKISERTGMHPSNISAATTALVGLGWLKKVGSGGHS KASRYTLCSPEETVAEQATVAHPATVAEEATVAQSATVADPATPPVAQSATPPVADAARGKEQTIEQTNELTILQPAAPT APKVKAEPVDEKETALQAACRQTWAAYSEAYQRRYKTKPVRNQAVNAKVKQFVQRIGHDESPAVAAFFVDAVNEAFVVRL VHDFGQLLTRAEGYRTQWFNGAAITSTRAKQVDQSQANYDTAGEAMTILRQRRAEANAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32562; Mature: 32431
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGQFSLVPIEVILDKRLTLEQTRVLIALFSFRNKVTDTVWPSRAKISERTGMHPSNIS CCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCH AATTALVGLGWLKKVGSGGHSKASRYTLCSPEETVAEQATVAHPATVAEEATVAQSATVA HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC DPATPPVAQSATPPVADAARGKEQTIEQTNELTILQPAAPTAPKVKAEPVDEKETALQAA CCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH CRQTWAAYSEAYQRRYKTKPVRNQAVNAKVKQFVQRIGHDESPAVAAFFVDAVNEAFVVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVHDFGQLLTRAEGYRTQWFNGAAITSTRAKQVDQSQANYDTAGEAMTILRQRRAEANAC HHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEGQFSLVPIEVILDKRLTLEQTRVLIALFSFRNKVTDTVWPSRAKISERTGMHPSNIS CCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCH AATTALVGLGWLKKVGSGGHSKASRYTLCSPEETVAEQATVAHPATVAEEATVAQSATVA HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC DPATPPVAQSATPPVADAARGKEQTIEQTNELTILQPAAPTAPKVKAEPVDEKETALQAA CCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH CRQTWAAYSEAYQRRYKTKPVRNQAVNAKVKQFVQRIGHDESPAVAAFFVDAVNEAFVVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVHDFGQLLTRAEGYRTQWFNGAAITSTRAKQVDQSQANYDTAGEAMTILRQRRAEANAC HHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA