Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611006
Identifier: 120611006
GI number: 120611006
Start: 2560512
End: 2561963
Strand: Reverse
Name: 120611006
Synonym: Aave_2334
Alternate gene names: NA
Gene position: 2561963-2560512 (Counterclockwise)
Preceding gene: 120611007
Following gene: 120611005
Centisome position: 47.86
GC content: 60.19
Gene sequence:
>1452_bases ATGGGCGGCGGCGTGGAAGCCAAGTCTTTGGGGTTCGACTTCAGGGAAAGACACGCACGGCAGATTGACGTAAAGAGCCC GGCTCGCCGGGAAATTCATCCGGTCCGTACACGCGGGAGCAGGAGTAGCGCCCTGCCCGCCCTTCACATCGTTCTCGCAC TGGAACCTGCGGATCGCAACCCGGTGGAAATCCACCAGATTGCGGCAGCCCTTCGATGGGAAGTGGGCGTACACCGGTGG CGTGACGTACCGGGTGAGGCGGCAGAGAAGCGCGCGGCCAAGAACAGCAACACGCAACCAGGTGGTGTACAGCGGAGGTC GTTCCCTCCCACCTGCAGCCCTCCACGAGGGCAAAAACCGAAGCCACCTTTCCCCGAGCCGGCTTCGGTTTTTCCAGGAG ATGAACATGCAGATCAGCGAAGCGAAGATGGCCGGCGTCGAGGCCTTCCGGGCGGGCAAGGGCAGAGCCCCGGCCCTGAA CCCCGGATTCGTCACGCGTGCCATCGAGGCCGGCAACCTGTTGAACCTGATGGATGCCTACCTGCACGGGTGGACCATCG CTTCGCTGGCGCACGATGCGCCGCTGCCTACCATGCCCAGTGTGGTGGAGCTGGCCCAGATCGAAGCCGCGGCGGCCTGA CGGCGGCCGCCTCTCCCAACAGTTTCCAGCCGCGCCGGGGGCTCTCCTCCCTCCCTCTCTCTTTCCCCGGCGAGGTCGCA TCCCGCGATCACGGCTCTTTTACACCGCAGTGCGCACCTGTCGCGCAGCGAACTCTTTTTTCGGAGGCTGAAACTATGCC AGAAGGAAATAAAAGAAGTAGGTTCGAATGGAATGATGTCGCTTTAGAAATACTGCGATCAGGGTATGGATCCGTTGCTG CCGATGTTCTTGCTGAACGTATTGGATGCACCGTCAGCGCCGTTTACCAAGCCGCCAACAAGCGGGGGATTCGCAAGTTG GAGCGCAGTGTCGGAAACCCCGGGATTGATGGTTATCCGATTGGTCACGTCCGGCGGGACCGCCATCACGGTTTCTACGA AAAAAAGATTGCCGCCACCGGAAACCGCCGCTCCGACTGGCGACGGTTGGACTTGCTGGAATGGGAAGAAAAAAACGGCC CGGTCCCCGAAGGATTCATTGTTTACTGCCCCCCCGGCTTGGAGAGAACCCCTGAAAATCTGTCAATCCGGAGGGCGAAA ATCTCGACAGAAGAGAAGGAACTCCTTCATCTAAAGGCGGAGTTCAGCAGGAGAATTGCCGAGCTAAAGCGGCTGAGTAG GACGCCAGTCGCCCTAACCACGCCCCAGCCTTGCCAAACCTACACCGCCGCCGATGACGCGCTGATAGAGCAGTTATGCG ATACGCATACCCACGCCCAAATCGCCGAGCGACTGGGGCGCAGCACTAAGTCCGTAGGAAACAGAATTTACCGCCTCCAA GGAAAGCGGTAA
Upstream 100 bases:
>100_bases TACGTTTGTAGAATTCATCCCAGGCAGTGACACCTCGTCACCCGCCCAGGGCCCATCGATCGCGAGCAGCCCTCTGGATC TTTAAAAAGAGAGCGATGTG
Downstream 100 bases:
>100_bases TTTATGGACAGCACTGATTTCTTAATCACCAAACAGCGTTTGGAAAAAGCGCTTGCTGCGATGGACAGCGGCAATTCCAG CATCGAGAAAGCACTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MGGGVEAKSLGFDFRERHARQIDVKSPARREIHPVRTRGSRSSALPALHIVLALEPADRNPVEIHQIAAALRWEVGVHRW RDVPGEAAEKRAAKNSNTQPGGVQRRSFPPTCSPPRGQKPKPPFPEPASVFPGDEHADQRSEDGRRRGLPGGQGQSPGPE PRIRHACHRGRQPVEPDGCLPARVDHRFAGARCAAAYHAQCGGAGPDRSRGGLTAAASPNSFQPRRGLSSLPLSFPGEVA SRDHGSFTPQCAPVAQRTLFSEAETMPEGNKRSRFEWNDVALEILRSGYGSVAADVLAERIGCTVSAVYQAANKRGIRKL ERSVGNPGIDGYPIGHVRRDRHHGFYEKKIAATGNRRSDWRRLDLLEWEEKNGPVPEGFIVYCPPGLERTPENLSIRRAK ISTEEKELLHLKAEFSRRIAELKRLSRTPVALTTPQPCQTYTAADDALIEQLCDTHTHAQIAERLGRSTKSVGNRIYRLQ GKR
Sequences:
>Translated_483_residues MGGGVEAKSLGFDFRERHARQIDVKSPARREIHPVRTRGSRSSALPALHIVLALEPADRNPVEIHQIAAALRWEVGVHRW RDVPGEAAEKRAAKNSNTQPGGVQRRSFPPTCSPPRGQKPKPPFPEPASVFPGDEHADQRSEDGRRRGLPGGQGQSPGPE PRIRHACHRGRQPVEPDGCLPARVDHRFAGARCAAAYHAQCGGAGPDRSRGGLTAAASPNSFQPRRGLSSLPLSFPGEVA SRDHGSFTPQCAPVAQRTLFSEAETMPEGNKRSRFEWNDVALEILRSGYGSVAADVLAERIGCTVSAVYQAANKRGIRKL ERSVGNPGIDGYPIGHVRRDRHHGFYEKKIAATGNRRSDWRRLDLLEWEEKNGPVPEGFIVYCPPGLERTPENLSIRRAK ISTEEKELLHLKAEFSRRIAELKRLSRTPVALTTPQPCQTYTAADDALIEQLCDTHTHAQIAERLGRSTKSVGNRIYRLQ GKR >Mature_482_residues GGGVEAKSLGFDFRERHARQIDVKSPARREIHPVRTRGSRSSALPALHIVLALEPADRNPVEIHQIAAALRWEVGVHRWR DVPGEAAEKRAAKNSNTQPGGVQRRSFPPTCSPPRGQKPKPPFPEPASVFPGDEHADQRSEDGRRRGLPGGQGQSPGPEP RIRHACHRGRQPVEPDGCLPARVDHRFAGARCAAAYHAQCGGAGPDRSRGGLTAAASPNSFQPRRGLSSLPLSFPGEVAS RDHGSFTPQCAPVAQRTLFSEAETMPEGNKRSRFEWNDVALEILRSGYGSVAADVLAERIGCTVSAVYQAANKRGIRKLE RSVGNPGIDGYPIGHVRRDRHHGFYEKKIAATGNRRSDWRRLDLLEWEEKNGPVPEGFIVYCPPGLERTPENLSIRRAKI STEEKELLHLKAEFSRRIAELKRLSRTPVALTTPQPCQTYTAADDALIEQLCDTHTHAQIAERLGRSTKSVGNRIYRLQG KR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53245; Mature: 53113
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGVEAKSLGFDFRERHARQIDVKSPARREIHPVRTRGSRSSALPALHIVLALEPADRN CCCCCCHHHCCCCHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC PVEIHQIAAALRWEVGVHRWRDVPGEAAEKRAAKNSNTQPGGVQRRSFPPTCSPPRGQKP CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KPPFPEPASVFPGDEHADQRSEDGRRRGLPGGQGQSPGPEPRIRHACHRGRQPVEPDGCL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC PARVDHRFAGARCAAAYHAQCGGAGPDRSRGGLTAAASPNSFQPRRGLSSLPLSFPGEVA CCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHH SRDHGSFTPQCAPVAQRTLFSEAETMPEGNKRSRFEWNDVALEILRSGYGSVAADVLAER CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH IGCTVSAVYQAANKRGIRKLERSVGNPGIDGYPIGHVRRDRHHGFYEKKIAATGNRRSDW HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHH RRLDLLEWEEKNGPVPEGFIVYCPPGLERTPENLSIRRAKISTEEKELLHLKAEFSRRIA HHHCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH ELKRLSRTPVALTTPQPCQTYTAADDALIEQLCDTHTHAQIAERLGRSTKSVGNRIYRLQ HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCEEEEC GKR CCC >Mature Secondary Structure GGGVEAKSLGFDFRERHARQIDVKSPARREIHPVRTRGSRSSALPALHIVLALEPADRN CCCCCHHHCCCCHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC PVEIHQIAAALRWEVGVHRWRDVPGEAAEKRAAKNSNTQPGGVQRRSFPPTCSPPRGQKP CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KPPFPEPASVFPGDEHADQRSEDGRRRGLPGGQGQSPGPEPRIRHACHRGRQPVEPDGCL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC PARVDHRFAGARCAAAYHAQCGGAGPDRSRGGLTAAASPNSFQPRRGLSSLPLSFPGEVA CCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHH SRDHGSFTPQCAPVAQRTLFSEAETMPEGNKRSRFEWNDVALEILRSGYGSVAADVLAER CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH IGCTVSAVYQAANKRGIRKLERSVGNPGIDGYPIGHVRRDRHHGFYEKKIAATGNRRSDW HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHH RRLDLLEWEEKNGPVPEGFIVYCPPGLERTPENLSIRRAKISTEEKELLHLKAEFSRRIA HHHCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH ELKRLSRTPVALTTPQPCQTYTAADDALIEQLCDTHTHAQIAERLGRSTKSVGNRIYRLQ HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCEEEEC GKR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA