| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610956
Identifier: 120610956
GI number: 120610956
Start: 2511219
End: 2512868
Strand: Reverse
Name: 120610956
Synonym: Aave_2282
Alternate gene names: NA
Gene position: 2512868-2511219 (Counterclockwise)
Preceding gene: 120610957
Following gene: 120610955
Centisome position: 46.95
GC content: 73.64
Gene sequence:
>1650_bases ATGCTGTCCTTCGTGAACGCCGCTGTTGCCCGTGCCGCGTCCCTGCGCGATCCCGAAGATCCCGGGCCCGGGTATCCCGC CGTCGGGCGCCGCCAATGGCTCGCCACCGCTGCCGTGGGGGTGTGCGGTGCCGCCGGGCTCACGCTGGCCGCACCGCCCG GGGCCTTCGCCGCCGAAAGCGATCGCGACGCGCCCCGCTCTCCCGCGGAGGGCGCGCGCCTGCTGGACCGGCTCACCTGG GGCGCCAACGCCGCGGCACTGGAGGGCCTGCAGCACGTCGGCCCGGCGGCCACCGTGGCGGCGCTGCTGCGCCCTGCCCC GAACGCCCCGCTGCCGCCCGAGGCGCAGGCGCAGATCGACGCCATGGCCATCACCCTCACGCCGATGGAAACCCTGGCCA TCGACATGCAGGCCCGCCAGCAGGCCATCAGGAACGAGCCGACCGAGGAGGCCCGCAAGGCCGCCCAGGCTGCCTACCAG CGCGACATGCGGGCGCTGCAGCGCGAGGCCGAGCGGCGCTTCGTGCTGCGGGCCGTGTACTCCCCGGCGCAGCTGCAGGA GAAGATGACCTGGTTCTGGATGAACCATTTCAACGTGTTCGCCGGCAAGGCGGACATCCGCGCCATGGTGGGCGACTACG AGGACCGCGCCATCCGCCCGCATGCGCTGGGGCGCTTCCGCGACCTGCTGGGCGCCACGGTGCGGCATCCGGCCATGCTG CGCTACCTGGACAACGCGCAGAATGCCGCCCGCCGCATCAACGAGAACTACGCGCGCGAGTTGATGGAGCTGCACACGCT GGGCGTGGACGGCGGATACAGCCAGCGCGACGTGCAGGAGATGGCGCGCGTGCTCACCGGCCACGGCGTGTCGCTGCGCC CGCTGGACGAGCCGCCACCGAAGCTCAAGCCCGAATGGGCACGCCAGTACGTGCGCCGCGGCCTGTACGAGTTCCATCCG CAGCGCCACGACTGGGACCCGAAGGAACTGCTCGGCCAGCCGCTGCAGGGCCAGGGCATGGCGGAGCTGGACGAGGCGCT GGACCGGCTCGCCCGCGCGCCGGCCACCGCCCGCTTCGTGACCCGCAAGATGGCCGCCTACCTGGTGGGCGATGCACCGC CGCCCGCGCTGCTGCAGGCGATGGCCGAGCGCTTCCAGCAGACCGACGGCCACATCGGCGCGGTGCTGCAGACGCTGTTC ACAAGCGAGGCGTTCCAGGCCTCGCTCGGCACCCGGCTGCGCGACCCCGTGCAGTACGTGATGGCCGGCCTGCGCCTGGG CTACTCCGACCGCGTGCTGGCCAACCCCGATCCGGCGCTCTCGTGGCTGCAGCGCCTGGCCGAGCCGCTCTACGGCCGCG TCACGCCGGACGGCTATCCGCTGGACGCGGCCGCCTGGACCAGCTCCGGCCAGATGGCCGTGCGCTTCGAGATCGCGCGG GCGCTGGGCGGGGCCGGGACCGGCGCGCTCTACCGCGCCGAGGGGGCGCCGCCGCCGAAGGTGCGGCCCCCCGCGATCGC GCAGAACGCCGCCTTCCGCGCCATGGAGCCGCAACTGGCGCCGGCCACGCGCGTGGCGCTGGCGCGTGCCGGCTCGCCCG CGGAATGGAACACTTTCTTGCTGTCCGCCCCCGAATTCATGTACGCCTGA
Upstream 100 bases:
>100_bases CGATACATCTGTGTCCGCCGGGTAAAACCTCGCCGGCCCCCTTGCGGGGCCTTGCGCGGCGGCGCACCATGCGCGCCACA GCCACTCTTCCTCCAACACC
Downstream 100 bases:
>100_bases CGGCCGCCAGGGCGTTGCGAATGCAACCGCCCACGGAGCTGCCCGTTGATCCAGGAAAGGCCTGCCATGCCGCATTCCGC CACTCCCGAACGCTCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MLSFVNAAVARAASLRDPEDPGPGYPAVGRRQWLATAAVGVCGAAGLTLAAPPGAFAAESDRDAPRSPAEGARLLDRLTW GANAAALEGLQHVGPAATVAALLRPAPNAPLPPEAQAQIDAMAITLTPMETLAIDMQARQQAIRNEPTEEARKAAQAAYQ RDMRALQREAERRFVLRAVYSPAQLQEKMTWFWMNHFNVFAGKADIRAMVGDYEDRAIRPHALGRFRDLLGATVRHPAML RYLDNAQNAARRINENYARELMELHTLGVDGGYSQRDVQEMARVLTGHGVSLRPLDEPPPKLKPEWARQYVRRGLYEFHP QRHDWDPKELLGQPLQGQGMAELDEALDRLARAPATARFVTRKMAAYLVGDAPPPALLQAMAERFQQTDGHIGAVLQTLF TSEAFQASLGTRLRDPVQYVMAGLRLGYSDRVLANPDPALSWLQRLAEPLYGRVTPDGYPLDAAAWTSSGQMAVRFEIAR ALGGAGTGALYRAEGAPPPKVRPPAIAQNAAFRAMEPQLAPATRVALARAGSPAEWNTFLLSAPEFMYA
Sequences:
>Translated_549_residues MLSFVNAAVARAASLRDPEDPGPGYPAVGRRQWLATAAVGVCGAAGLTLAAPPGAFAAESDRDAPRSPAEGARLLDRLTW GANAAALEGLQHVGPAATVAALLRPAPNAPLPPEAQAQIDAMAITLTPMETLAIDMQARQQAIRNEPTEEARKAAQAAYQ RDMRALQREAERRFVLRAVYSPAQLQEKMTWFWMNHFNVFAGKADIRAMVGDYEDRAIRPHALGRFRDLLGATVRHPAML RYLDNAQNAARRINENYARELMELHTLGVDGGYSQRDVQEMARVLTGHGVSLRPLDEPPPKLKPEWARQYVRRGLYEFHP QRHDWDPKELLGQPLQGQGMAELDEALDRLARAPATARFVTRKMAAYLVGDAPPPALLQAMAERFQQTDGHIGAVLQTLF TSEAFQASLGTRLRDPVQYVMAGLRLGYSDRVLANPDPALSWLQRLAEPLYGRVTPDGYPLDAAAWTSSGQMAVRFEIAR ALGGAGTGALYRAEGAPPPKVRPPAIAQNAAFRAMEPQLAPATRVALARAGSPAEWNTFLLSAPEFMYA >Mature_549_residues MLSFVNAAVARAASLRDPEDPGPGYPAVGRRQWLATAAVGVCGAAGLTLAAPPGAFAAESDRDAPRSPAEGARLLDRLTW GANAAALEGLQHVGPAATVAALLRPAPNAPLPPEAQAQIDAMAITLTPMETLAIDMQARQQAIRNEPTEEARKAAQAAYQ RDMRALQREAERRFVLRAVYSPAQLQEKMTWFWMNHFNVFAGKADIRAMVGDYEDRAIRPHALGRFRDLLGATVRHPAML RYLDNAQNAARRINENYARELMELHTLGVDGGYSQRDVQEMARVLTGHGVSLRPLDEPPPKLKPEWARQYVRRGLYEFHP QRHDWDPKELLGQPLQGQGMAELDEALDRLARAPATARFVTRKMAAYLVGDAPPPALLQAMAERFQQTDGHIGAVLQTLF TSEAFQASLGTRLRDPVQYVMAGLRLGYSDRVLANPDPALSWLQRLAEPLYGRVTPDGYPLDAAAWTSSGQMAVRFEIAR ALGGAGTGALYRAEGAPPPKVRPPAIAQNAAFRAMEPQLAPATRVALARAGSPAEWNTFLLSAPEFMYA
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59903; Mature: 59903
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFVNAAVARAASLRDPEDPGPGYPAVGRRQWLATAAVGVCGAAGLTLAAPPGAFAAES CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC DRDAPRSPAEGARLLDRLTWGANAAALEGLQHVGPAATVAALLRPAPNAPLPPEAQAQID CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHCEE AMAITLTPMETLAIDMQARQQAIRNEPTEEARKAAQAAYQRDMRALQREAERRFVLRAVY EEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPAQLQEKMTWFWMNHFNVFAGKADIRAMVGDYEDRAIRPHALGRFRDLLGATVRHPAML CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH RYLDNAQNAARRINENYARELMELHTLGVDGGYSQRDVQEMARVLTGHGVSLRPLDEPPP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCC KLKPEWARQYVRRGLYEFHPQRHDWDPKELLGQPLQGQGMAELDEALDRLARAPATARFV CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH TRKMAAYLVGDAPPPALLQAMAERFQQTDGHIGAVLQTLFTSEAFQASLGTRLRDPVQYV HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGLRLGYSDRVLANPDPALSWLQRLAEPLYGRVTPDGYPLDAAAWTSSGQMAVRFEIAR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEHHHHHH ALGGAGTGALYRAEGAPPPKVRPPAIAQNAAFRAMEPQLAPATRVALARAGSPAEWNTFL HHCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCEEE LSAPEFMYA EECCHHHCC >Mature Secondary Structure MLSFVNAAVARAASLRDPEDPGPGYPAVGRRQWLATAAVGVCGAAGLTLAAPPGAFAAES CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC DRDAPRSPAEGARLLDRLTWGANAAALEGLQHVGPAATVAALLRPAPNAPLPPEAQAQID CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHCEE AMAITLTPMETLAIDMQARQQAIRNEPTEEARKAAQAAYQRDMRALQREAERRFVLRAVY EEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPAQLQEKMTWFWMNHFNVFAGKADIRAMVGDYEDRAIRPHALGRFRDLLGATVRHPAML CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH RYLDNAQNAARRINENYARELMELHTLGVDGGYSQRDVQEMARVLTGHGVSLRPLDEPPP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCC KLKPEWARQYVRRGLYEFHPQRHDWDPKELLGQPLQGQGMAELDEALDRLARAPATARFV CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH TRKMAAYLVGDAPPPALLQAMAERFQQTDGHIGAVLQTLFTSEAFQASLGTRLRDPVQYV HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGLRLGYSDRVLANPDPALSWLQRLAEPLYGRVTPDGYPLDAAAWTSSGQMAVRFEIAR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEHHHHHH ALGGAGTGALYRAEGAPPPKVRPPAIAQNAAFRAMEPQLAPATRVALARAGSPAEWNTFL HHCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCEEE LSAPEFMYA EECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA