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The map label for this gene is tolR [H]

Identifier: 120610900

GI number: 120610900

Start: 2447902

End: 2448327

Strand: Reverse

Name: tolR [H]

Synonym: Aave_2226

Alternate gene names: 120610900

Gene position: 2448327-2447902 (Counterclockwise)

Preceding gene: 120610901

Following gene: 120610899

Centisome position: 45.74

GC content: 68.08

Gene sequence:

>426_bases
ATGCCCACCATGGCCTCGCGCGGCGGCAGCCGCCGCCGCTCGATGAACGAGATCAACATGGTCCCCTTCATCGACGTGAT
GCTGGTGCTGCTCATCATCTTCATGGTGACCGCGCCCATGCTCACCCCCAGCCGGATCGACGTGCCCACCGTCGGCAAGG
GCGCCAAGGCGCCCAAGGCCTTCGGCCAGGTCATCATCCACAAGGACGGCAGCCTGCAGCTCAAGACGGGCGACCTCGAA
CGCCCCGTGACACTCAAGGAACTCGGCGCCACCGCCAAGGCCTGGCAGGCCACGCAGGAAGAAGGCACGCCGGTGCTGGT
CACCGCCGACCGGAACGTGACCTACGACTCCGTGGTCAAGGCCATGGACGCGCTGCAGCGCGCGGGCGTGCAGCGCGTGG
GCCTCACCGTCAAGTCGGGCGGCTGA

Upstream 100 bases:

>100_bases
CATCGAGGAATTCTCGAACATCCTGCAGCGCAACCTGGGCGCGGCCCCGGCCTCCGCCTCGGGCCACTGACACCGCCACG
CACGCGAGAAGGAGCCTCCC

Downstream 100 bases:

>100_bases
CGCCCGGCACCTCCTCCGCCCCAGCCGCCGATCCCCGGAGCCGCTCCCGAACGCGATGCACGCCCACAACGACCGAGACC
AGTTCGCCCCCACGCGTCCG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPTMASRGGSRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSRIDVPTVGKGAKAPKAFGQVIIHKDGSLQLKTGDLE
RPVTLKELGATAKAWQATQEEGTPVLVTADRNVTYDSVVKAMDALQRAGVQRVGLTVKSGG

Sequences:

>Translated_141_residues
MPTMASRGGSRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSRIDVPTVGKGAKAPKAFGQVIIHKDGSLQLKTGDLE
RPVTLKELGATAKAWQATQEEGTPVLVTADRNVTYDSVVKAMDALQRAGVQRVGLTVKSGG
>Mature_140_residues
PTMASRGGSRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSRIDVPTVGKGAKAPKAFGQVIIHKDGSLQLKTGDLER
PVTLKELGATAKAWQATQEEGTPVLVTADRNVTYDSVVKAMDALQRAGVQRVGLTVKSGG

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=123, Percent_Identity=35.7723577235772, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15119; Mature: 14988

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMASRGGSRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSRIDVPTVGKGAKAPKA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
FGQVIIHKDGSLQLKTGDLERPVTLKELGATAKAWQATQEEGTPVLVTADRNVTYDSVVK
HCEEEEECCCCEEEECCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
AMDALQRAGVQRVGLTVKSGG
HHHHHHHCCHHHHCEEEECCC
>Mature Secondary Structure 
PTMASRGGSRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSRIDVPTVGKGAKAPKA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
FGQVIIHKDGSLQLKTGDLERPVTLKELGATAKAWQATQEEGTPVLVTADRNVTYDSVVK
HCEEEEECCCCEEEECCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
AMDALQRAGVQRVGLTVKSGG
HHHHHHHCCHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]