| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610827
Identifier: 120610827
GI number: 120610827
Start: 2363940
End: 2364803
Strand: Direct
Name: 120610827
Synonym: Aave_2153
Alternate gene names: NA
Gene position: 2363940-2364803 (Clockwise)
Preceding gene: 120610825
Following gene: 120610828
Centisome position: 44.16
GC content: 71.18
Gene sequence:
>864_bases ATGCCTTTTTGCCTTCAAGACATCCTGCGTCCGCATTCCCGTCCTGGTGCCCGCCCGCTGCTTGCCGCCGCCGCGGCGGC CATCGCCGCGCTCACCGGCTGCACAGGGGTGCCCAACTCCATGCCGGGCCTGGACCGGGCGTCCCGCTTCGATCCGGACG ACTTCAACACCAGCGCCAGCATCTACACGCGCCACATCGACGCGCCACCCGCCAAGGTGTGCGAAGGCGCCCGCCGCGCG CTGCTGAGCCAGGGCTACCTCGTGGGCACCGCCAGCGCCGAGGTGGTGGCCGGCCGCAAGTACTTCCAGCCGTCCACCGA CATCCACTACCAGGTGGAGATGCGCGTCGTCTGCGCCTCCGAGGGGCCGGAGAAGCAGCGCACGGCGGTTTTCGCCAGCG CCCTGCAGGACCGCTACGTCATCAAGAAGATCAACAATTCGGCCTCCCTCGGCGTGGGGGCGCTGGGCTCGCTTTCGCTG CCCGTGACGGCCAGCGACGACACCCTCGTGAAGGTGGGCAGCGAAACCGTCACCGACGCCCGCTTCTACGACCGCTTCTT TCAGGTCTTCGACCGCTTCATCCCGCCGCGCGAGGCGCCGACCGAGGTGGGCCAGGCATCGCCGAAGGTGCCCAGGACGC CCGATACCGAGGCCATGGTGCGCGAGGCGCGCGAGTCCGGCGAGGTCAAGGATCCAGCCGAAGGCCCCGCCACGACCGCG CCGGTCGCACCGCAGCGCGCGCCGGCGTCCGACCCGCTGCCCGAGGTGCTGCCGTATCCCGTGTTTCCCTCTCCGCCGGC CGCCGCCGCTTCCACGGCCTCGGCGCCGTCGGTCCCCTCCGGGCCGCCCTCCATCCATCCCTGA
Upstream 100 bases:
>100_bases AGAATCGCACCGCCTGTGTTGCGAGAGGTTACAACCCCTGCGCAATCGCGCGAAATCGCAACCAGCACAATGCAGGGTCA GGAATCCTGCCGCCAAGCCC
Downstream 100 bases:
>100_bases CGGACCAGGACGGGGCGGCATCGCCCGTCCCGCTCCCGCGCCGCTCCCGCGGCCCGGCACAGCGGTTCCGGCGGGATCCC CCGGCCGCACCGGCGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPFCLQDILRPHSRPGARPLLAAAAAAIAALTGCTGVPNSMPGLDRASRFDPDDFNTSASIYTRHIDAPPAKVCEGARRA LLSQGYLVGTASAEVVAGRKYFQPSTDIHYQVEMRVVCASEGPEKQRTAVFASALQDRYVIKKINNSASLGVGALGSLSL PVTASDDTLVKVGSETVTDARFYDRFFQVFDRFIPPREAPTEVGQASPKVPRTPDTEAMVREARESGEVKDPAEGPATTA PVAPQRAPASDPLPEVLPYPVFPSPPAAAASTASAPSVPSGPPSIHP
Sequences:
>Translated_287_residues MPFCLQDILRPHSRPGARPLLAAAAAAIAALTGCTGVPNSMPGLDRASRFDPDDFNTSASIYTRHIDAPPAKVCEGARRA LLSQGYLVGTASAEVVAGRKYFQPSTDIHYQVEMRVVCASEGPEKQRTAVFASALQDRYVIKKINNSASLGVGALGSLSL PVTASDDTLVKVGSETVTDARFYDRFFQVFDRFIPPREAPTEVGQASPKVPRTPDTEAMVREARESGEVKDPAEGPATTA PVAPQRAPASDPLPEVLPYPVFPSPPAAAASTASAPSVPSGPPSIHP >Mature_286_residues PFCLQDILRPHSRPGARPLLAAAAAAIAALTGCTGVPNSMPGLDRASRFDPDDFNTSASIYTRHIDAPPAKVCEGARRAL LSQGYLVGTASAEVVAGRKYFQPSTDIHYQVEMRVVCASEGPEKQRTAVFASALQDRYVIKKINNSASLGVGALGSLSLP VTASDDTLVKVGSETVTDARFYDRFFQVFDRFIPPREAPTEVGQASPKVPRTPDTEAMVREARESGEVKDPAEGPATTAP VAPQRAPASDPLPEVLPYPVFPSPPAAAASTASAPSVPSGPPSIHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30244; Mature: 30113
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFCLQDILRPHSRPGARPLLAAAAAAIAALTGCTGVPNSMPGLDRASRFDPDDFNTSAS CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCE IYTRHIDAPPAKVCEGARRALLSQGYLVGTASAEVVAGRKYFQPSTDIHYQVEMRVVCAS EEEEECCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHCHHHCCCCCCEEEEEEEEEEECC EGPEKQRTAVFASALQDRYVIKKINNSASLGVGALGSLSLPVTASDDTLVKVGSETVTDA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH RFYDRFFQVFDRFIPPREAPTEVGQASPKVPRTPDTEAMVREARESGEVKDPAEGPATTA HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC PVAPQRAPASDPLPEVLPYPVFPSPPAAAASTASAPSVPSGPPSIHP CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PFCLQDILRPHSRPGARPLLAAAAAAIAALTGCTGVPNSMPGLDRASRFDPDDFNTSAS CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCE IYTRHIDAPPAKVCEGARRALLSQGYLVGTASAEVVAGRKYFQPSTDIHYQVEMRVVCAS EEEEECCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHCHHHCCCCCCEEEEEEEEEEECC EGPEKQRTAVFASALQDRYVIKKINNSASLGVGALGSLSLPVTASDDTLVKVGSETVTDA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHH RFYDRFFQVFDRFIPPREAPTEVGQASPKVPRTPDTEAMVREARESGEVKDPAEGPATTA HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC PVAPQRAPASDPLPEVLPYPVFPSPPAAAASTASAPSVPSGPPSIHP CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA