| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610809
Identifier: 120610809
GI number: 120610809
Start: 2346111
End: 2347229
Strand: Direct
Name: 120610809
Synonym: Aave_2133
Alternate gene names: NA
Gene position: 2346111-2347229 (Clockwise)
Preceding gene: 120610808
Following gene: 120610813
Centisome position: 43.83
GC content: 49.51
Gene sequence:
>1119_bases GTGGTGATGAATGATTTTACTGGTGACGTCTTAGCTTTAGTCGAATGGTTGGGAATCTCATGCAAGGCGCCTGAGTTGGA AGAGTTTCTCGTCCGAAAGCGTATTCATGACCGCCCTATGACTCCAGATCAAGTGGAAAGCGAGGGTTTGGTCGAAGACG ATGACGACACAGATGTGGAATATGAGCTGGCACGCCGTTCAAAAGAGTCCATGGTGGTTCAATCCGAGCGCTATGGATTC TGCCTCATTTTCCAGTCTCGCGAAAACTACGATCTTGTTCATCAAAATCCTTGTGGCTTTGACGACCCTTATGTTCTAGA GCAAGTGGCTTTTTTTGCCAAGGGTGTTCAGATCTATCAAGGTTTCGAAGGTCCAGTTTTTCGGGGTGTAGGAATGCTCA CCCGAAGATCGGATTCCGCGTATGTGGCACTGGGTTCACCGCTGGCCCGCCGGTCGGTTTATGAAACTTCCACAGATCTT TTTGTTGTAGGCAACTGGGTGCTCAATTTTGGCTTCCGGGAGGAGGGTGTGGATCCGTGCTTAGCTCATGTGCATATCCG GAAAAAGAATATTTTTGACGATGTCATGTTAAGCCCTCGGTTTTTGGATGTTGCTCCTGATGCCTATGCTTCCATGCTGG GCTTGGCTCAATTGGGACATCCAACAGATTCGCCAGACGTATTGGATTTCCTCGCCGGACTAGGATTGGACAACGAAATC GATGAGGAGATCGGCTGCCCCGAGGAAATGAATGGACGGGCTCGATCCCACGGTATCGTGATTTATTTCAAGGAAATGCA CGGAGCGGGTGGGAATTCATCTGCTCTGCCTGTCAAGATCGTTTCCGCTATTACCTATAAACGGCGCGGCGATTTGGGGT CTGTAGGGTATTCTGGCGTTTTACCTTTTTCGATGAACTTTGGTGATCGCCCCGATGTTGCGATTGCGAAAGCCAAGAAT TCTCCCGCAAAGATAACAGAGAGCGAAGAGCTGCTTTCCTATTATTGGCCTGTGGCGTCAGGCATAGTTGTGCAGGCAGT ATTCAGTCTCATCGATTGGCAGCTAGCCAGAGTGACACTTCATGCGCCGATACGTGCGTCTTTTGTCCTGAATGGCTGA
Upstream 100 bases:
>100_bases AGGGCAACGGGGTGCATGTCGGTCCCTTGCCGCGCCGCCTTCTCGTCAAAAATTTGGCGCAGCAGGAGAAAGCCTTTGTG ACTGAGGGCGAGGCGGAGAA
Downstream 100 bases:
>100_bases GTTAAAGTTTTCTGAAAAATACTGACTAAATTTGCAGTGCGATTGGTGATCTTTTCTGCAGGAGTGAGGTTTTCCTAAAT TGAGCGGTCAACCAAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MVMNDFTGDVLALVEWLGISCKAPELEEFLVRKRIHDRPMTPDQVESEGLVEDDDDTDVEYELARRSKESMVVQSERYGF CLIFQSRENYDLVHQNPCGFDDPYVLEQVAFFAKGVQIYQGFEGPVFRGVGMLTRRSDSAYVALGSPLARRSVYETSTDL FVVGNWVLNFGFREEGVDPCLAHVHIRKKNIFDDVMLSPRFLDVAPDAYASMLGLAQLGHPTDSPDVLDFLAGLGLDNEI DEEIGCPEEMNGRARSHGIVIYFKEMHGAGGNSSALPVKIVSAITYKRRGDLGSVGYSGVLPFSMNFGDRPDVAIAKAKN SPAKITESEELLSYYWPVASGIVVQAVFSLIDWQLARVTLHAPIRASFVLNG
Sequences:
>Translated_372_residues MVMNDFTGDVLALVEWLGISCKAPELEEFLVRKRIHDRPMTPDQVESEGLVEDDDDTDVEYELARRSKESMVVQSERYGF CLIFQSRENYDLVHQNPCGFDDPYVLEQVAFFAKGVQIYQGFEGPVFRGVGMLTRRSDSAYVALGSPLARRSVYETSTDL FVVGNWVLNFGFREEGVDPCLAHVHIRKKNIFDDVMLSPRFLDVAPDAYASMLGLAQLGHPTDSPDVLDFLAGLGLDNEI DEEIGCPEEMNGRARSHGIVIYFKEMHGAGGNSSALPVKIVSAITYKRRGDLGSVGYSGVLPFSMNFGDRPDVAIAKAKN SPAKITESEELLSYYWPVASGIVVQAVFSLIDWQLARVTLHAPIRASFVLNG >Mature_372_residues MVMNDFTGDVLALVEWLGISCKAPELEEFLVRKRIHDRPMTPDQVESEGLVEDDDDTDVEYELARRSKESMVVQSERYGF CLIFQSRENYDLVHQNPCGFDDPYVLEQVAFFAKGVQIYQGFEGPVFRGVGMLTRRSDSAYVALGSPLARRSVYETSTDL FVVGNWVLNFGFREEGVDPCLAHVHIRKKNIFDDVMLSPRFLDVAPDAYASMLGLAQLGHPTDSPDVLDFLAGLGLDNEI DEEIGCPEEMNGRARSHGIVIYFKEMHGAGGNSSALPVKIVSAITYKRRGDLGSVGYSGVLPFSMNFGDRPDVAIAKAKN SPAKITESEELLSYYWPVASGIVVQAVFSLIDWQLARVTLHAPIRASFVLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41291; Mature: 41291
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMNDFTGDVLALVEWLGISCKAPELEEFLVRKRIHDRPMTPDQVESEGLVEDDDDTDVE CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHH YELARRSKESMVVQSERYGFCLIFQSRENYDLVHQNPCGFDDPYVLEQVAFFAKGVQIYQ HHHHHCCHHHEEEECCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCC GFEGPVFRGVGMLTRRSDSAYVALGSPLARRSVYETSTDLFVVGNWVLNFGFREEGVDPC CCCCCHHHCCCCEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHH LAHVHIRKKNIFDDVMLSPRFLDVAPDAYASMLGLAQLGHPTDSPDVLDFLAGLGLDNEI HHHEEEHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCH DEEIGCPEEMNGRARSHGIVIYFKEMHGAGGNSSALPVKIVSAITYKRRGDLGSVGYSGV HHHCCCCHHHCCCCCCCCEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPFSMNFGDRPDVAIAKAKNSPAKITESEELLSYYWPVASGIVVQAVFSLIDWQLARVTL CEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE HAPIRASFVLNG ECCCEEEEEECC >Mature Secondary Structure MVMNDFTGDVLALVEWLGISCKAPELEEFLVRKRIHDRPMTPDQVESEGLVEDDDDTDVE CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHH YELARRSKESMVVQSERYGFCLIFQSRENYDLVHQNPCGFDDPYVLEQVAFFAKGVQIYQ HHHHHCCHHHEEEECCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCC GFEGPVFRGVGMLTRRSDSAYVALGSPLARRSVYETSTDLFVVGNWVLNFGFREEGVDPC CCCCCHHHCCCCEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHH LAHVHIRKKNIFDDVMLSPRFLDVAPDAYASMLGLAQLGHPTDSPDVLDFLAGLGLDNEI HHHEEEHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCH DEEIGCPEEMNGRARSHGIVIYFKEMHGAGGNSSALPVKIVSAITYKRRGDLGSVGYSGV HHHCCCCHHHCCCCCCCCEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPFSMNFGDRPDVAIAKAKNSPAKITESEELLSYYWPVASGIVVQAVFSLIDWQLARVTL CEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE HAPIRASFVLNG ECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA