| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610808
Identifier: 120610808
GI number: 120610808
Start: 2345473
End: 2345943
Strand: Direct
Name: 120610808
Synonym: Aave_2132
Alternate gene names: NA
Gene position: 2345473-2345943 (Clockwise)
Preceding gene: 120610807
Following gene: 120610809
Centisome position: 43.82
GC content: 39.28
Gene sequence:
>471_bases ATGAATGCAATAGCTCTGATTGATTTTTTAGGACACAGCAGTATTTATGAGCCATTCGATAAGTTTTTGTCTGCCAATGG TGTCAGGCAACGGCCAAAAGTCGGAAAAAACCTGGATACCGATATATTCATAAAGAAAGAGGGTTTGGCACTCTCTTTTG AAATTGATCCAGACGGTGCTGGAATAGTTAAGAAGAGCGAAGGAAGTTTTATTTTTAGTGATTTTGAAATCACTTTTTTG GATGAGGATAATGGTGTTTACTCCGGGCCATTGCCATACGACTTAAAAGTGAATGACAGTCGTGAAGTAATTGAAAAGAA ATTAAAGAATCTCAAAAGAAGATTGCCTGACAACGATAGCTATTATGTTGATGGACATGTCTGGACTGTGGCATTTGACG AATCGCGATTGCAGTTCTTTCAGATAAGTGTTCCTACCAATGGCAAGCGCAAACATGGTTTGTGCCCCTGA
Upstream 100 bases:
>100_bases ATATATTGCTGCCTTTGATGAGGATAGATTTCAATATTTGCAATTAAGCGTGCCTACCAATCTGTTTCGAAAGAATAATA TTTGTCCATGAGTGGTATTT
Downstream 100 bases:
>100_bases TATAGACATGTTGCTTAAACCTGCTTCGTCTTTTATTGGCTGTAAATGACGGCGCAACGAGAAGGCTAGGGCAACGGGGT GCATGTCGGTCCCTTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MNAIALIDFLGHSSIYEPFDKFLSANGVRQRPKVGKNLDTDIFIKKEGLALSFEIDPDGAGIVKKSEGSFIFSDFEITFL DEDNGVYSGPLPYDLKVNDSREVIEKKLKNLKRRLPDNDSYYVDGHVWTVAFDESRLQFFQISVPTNGKRKHGLCP
Sequences:
>Translated_156_residues MNAIALIDFLGHSSIYEPFDKFLSANGVRQRPKVGKNLDTDIFIKKEGLALSFEIDPDGAGIVKKSEGSFIFSDFEITFL DEDNGVYSGPLPYDLKVNDSREVIEKKLKNLKRRLPDNDSYYVDGHVWTVAFDESRLQFFQISVPTNGKRKHGLCP >Mature_156_residues MNAIALIDFLGHSSIYEPFDKFLSANGVRQRPKVGKNLDTDIFIKKEGLALSFEIDPDGAGIVKKSEGSFIFSDFEITFL DEDNGVYSGPLPYDLKVNDSREVIEKKLKNLKRRLPDNDSYYVDGHVWTVAFDESRLQFFQISVPTNGKRKHGLCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17663; Mature: 17663
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIALIDFLGHSSIYEPFDKFLSANGVRQRPKVGKNLDTDIFIKKEGLALSFEIDPDGA CCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCC GIVKKSEGSFIFSDFEITFLDEDNGVYSGPLPYDLKVNDSREVIEKKLKNLKRRLPDNDS CEEEECCCCEEEECEEEEEEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC YYVDGHVWTVAFDESRLQFFQISVPTNGKRKHGLCP EEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MNAIALIDFLGHSSIYEPFDKFLSANGVRQRPKVGKNLDTDIFIKKEGLALSFEIDPDGA CCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCC GIVKKSEGSFIFSDFEITFLDEDNGVYSGPLPYDLKVNDSREVIEKKLKNLKRRLPDNDS CEEEECCCCEEEECEEEEEEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC YYVDGHVWTVAFDESRLQFFQISVPTNGKRKHGLCP EEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA