| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yddO [C]
Identifier: 120610712
GI number: 120610712
Start: 2213819
End: 2214580
Strand: Direct
Name: yddO [C]
Synonym: Aave_2032
Alternate gene names: 120610712
Gene position: 2213819-2214580 (Clockwise)
Preceding gene: 120610710
Following gene: 120610713
Centisome position: 41.36
GC content: 71.65
Gene sequence:
>762_bases ATGACTGCTCCATCGCCCGACCCGTCCCGCACTGCTGCCCCGTCCGCCATGCCCGTCCTATGGTCGGGCCTGGGCCTGCG CCACACGCCCCCGGGTGCGGCCACACCGCTGTTCGTCGGCCTGGACCTGCGCATCGGGCCGGGCACCACGCTGCTGCGGG GCGGCGACGGGCGCGGCAAGACCACGCTGCTGCGGATCATCGCGGACGCGCTGCGTCCGCAGGCCGGACGCACGGGGGCG TGCGGCGGCGGTGTTTTCTGGGCCGATCCCCGGGGCGAGGGCCCGGGGCTGCCCGCCGTGCAACAGACACCGGTGGATTG GTGGGCCGGGCAGGCGCAGCGCTGGCCGGACTGGAGCGCGCGGGCCCTGGCGCTGCACGTCGAGGGGTTCGGCCTGGCCG GGCACGCCGGCAAGCGGATGGAGCAGTTGTCCACCGGAACGCGCCGCAAGGTCCTGCTGGCGGCCGGCTTCGCCTGCGGC GCGGCGCTCGTGCTGGTGGACGAGCCGGTCGCGGGGCTGGACCGGCCTTCGGTGGACCATCTGCGCAAGGTGCTGGCGGG CTTCCGGCCCGCCGACGGTAGGGGGCGCAAGGCGTGGTGGTCGCGCATTACGACACGCTGGGCGAAGTTCCCTGGAGCCA GGTGGTCGAACTGGGCGACTGACCGGCCGCGCCTTGGGGTCGATCATGCGCAGGGTTGCGGGGGGGATGCAGCCTTGAAA TACAAAATTGCTAACAAATTTGCAAATATGATTCAAATGTGA
Upstream 100 bases:
>100_bases AGTGGGTCTGGACAATGGAAGGATGGGTGATTGTCGGGCAGGCTGCGCTGCAGATTGCCACAGAATGTAGGCCGATTTTT CGGCGCCGCACTTGCCTGCC
Downstream 100 bases:
>100_bases TTAAATTAATAGCATTGATCAGATGCATGCGCCCGTGCGGGCCGGCGCGAATCCCTGGAAGGCAAGCCCATGTCCCATCC GAAAGTTCCCATCCGCCTGG
Product: ABC-type multidrug transport system ATPase component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTAPSPDPSRTAAPSAMPVLWSGLGLRHTPPGAATPLFVGLDLRIGPGTTLLRGGDGRGKTTLLRIIADALRPQAGRTGA CGGGVFWADPRGEGPGLPAVQQTPVDWWAGQAQRWPDWSARALALHVEGFGLAGHAGKRMEQLSTGTRRKVLLAAGFACG AALVLVDEPVAGLDRPSVDHLRKVLAGFRPADGRGRKAWWSRITTRWAKFPGARWSNWATDRPRLGVDHAQGCGGDAALK YKIANKFANMIQM
Sequences:
>Translated_253_residues MTAPSPDPSRTAAPSAMPVLWSGLGLRHTPPGAATPLFVGLDLRIGPGTTLLRGGDGRGKTTLLRIIADALRPQAGRTGA CGGGVFWADPRGEGPGLPAVQQTPVDWWAGQAQRWPDWSARALALHVEGFGLAGHAGKRMEQLSTGTRRKVLLAAGFACG AALVLVDEPVAGLDRPSVDHLRKVLAGFRPADGRGRKAWWSRITTRWAKFPGARWSNWATDRPRLGVDHAQGCGGDAALK YKIANKFANMIQM >Mature_252_residues TAPSPDPSRTAAPSAMPVLWSGLGLRHTPPGAATPLFVGLDLRIGPGTTLLRGGDGRGKTTLLRIIADALRPQAGRTGAC GGGVFWADPRGEGPGLPAVQQTPVDWWAGQAQRWPDWSARALALHVEGFGLAGHAGKRMEQLSTGTRRKVLLAAGFACGA ALVLVDEPVAGLDRPSVDHLRKVLAGFRPADGRGRKAWWSRITTRWAKFPGARWSNWATDRPRLGVDHAQGCGGDAALKY KIANKFANMIQM
Specific function: Probably Part Of A Binding-Protein-Dependent Transport System Yddopqrs. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26903; Mature: 26772
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPSPDPSRTAAPSAMPVLWSGLGLRHTPPGAATPLFVGLDLRIGPGTTLLRGGDGRGK CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCH TTLLRIIADALRPQAGRTGACGGGVFWADPRGEGPGLPAVQQTPVDWWAGQAQRWPDWSA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC RALALHVEGFGLAGHAGKRMEQLSTGTRRKVLLAAGFACGAALVLVDEPVAGLDRPSVDH EEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECHHHCEEEEEECCCCCCCCCCCHHH LRKVLAGFRPADGRGRKAWWSRITTRWAKFPGARWSNWATDRPRLGVDHAQGCGGDAALK HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE YKIANKFANMIQM HHHHHHHHHHHCC >Mature Secondary Structure TAPSPDPSRTAAPSAMPVLWSGLGLRHTPPGAATPLFVGLDLRIGPGTTLLRGGDGRGK CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCH TTLLRIIADALRPQAGRTGACGGGVFWADPRGEGPGLPAVQQTPVDWWAGQAQRWPDWSA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC RALALHVEGFGLAGHAGKRMEQLSTGTRRKVLLAAGFACGAALVLVDEPVAGLDRPSVDH EEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECHHHCEEEEEECCCCCCCCCCCHHH LRKVLAGFRPADGRGRKAWWSRITTRWAKFPGARWSNWATDRPRLGVDHAQGCGGDAALK HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE YKIANKFANMIQM HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA