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The map label for this gene is yccS [H]

Identifier: 120610681

GI number: 120610681

Start: 2175390

End: 2177660

Strand: Direct

Name: yccS [H]

Synonym: Aave_2001

Alternate gene names: 120610681

Gene position: 2175390-2177660 (Clockwise)

Preceding gene: 120610680

Following gene: 120610683

Centisome position: 40.64

GC content: 72.79

Gene sequence:

>2271_bases
ATGGAACCGAGAACAACGACAACCACGATGGCGGCGGCCGGCCAGGCGGCGGAGCGCGGGCGTGCCGGCTGGCTGCGCCG
GCTGTGGGCGCAGGACGCCTTCGTTTACAGCCTGCGCGTTTTCATCGCGCTGAGCGGCGCGATGGCGCTGTGCTGGTGGC
GCGACCAGGTGGCGCTGGTGACGCCGCTCTTCCTGGGCATCATCGCCAGCGCGCTGGCAGAAACCGACGACAGCTGGCGC
GGGCGCCTGCGCGCGGTGTGGGTCATGCTCGCGTGCTTCGCGCTCGCGGCGTTCTCGGTGCAATTGCTGCTGCCGCATCC
GGCCTGGTTCGTGGCGGGCCTGGCATGTTCCACCTTCGGCTTCACGATGCTGGGCGCCATCGGCGAGCGCTACCGGGCCA
TCGCGTCGGCGACCGTGATCCTGGCGCTCTACGCGGCCATCAGCGCGTCTCCGGGGACGGTGGCCGGGCACGTGCCGGCC
GGCGGCCCCTGGCATGTACCGCTGCTGCTGCTGTCCGGCGCGGCGTGGTATGCGCTGCTGTCGCTGGTGTGGTGCGCGGC
GTTCCCGCACCAGCGCGTGCGGCAGAACCTGGCGGGGCTCTACGACCAGCTGGGCGCCTACCTGCGGCTCAAGGCCAGCC
TGTTCGAGCCGGTGCGCGGCGTGGACGTGGAGCGGCGGCGCCTGGCGCTGGCGCAGACGAACGGCCGCCTGGTGGCGGCC
CTCAATGCCACCAAGGAAAGCATCTTCAGCCGCTGGGGCGCCGGCGCGCGTGCCCTGCCCACGGGGCGGATGCTGAGGCA
CCTGAATCTCTACTTCATCGCGCAGGACATCCACGAGCGCGCCAGTTCCTCGCACCACCATTACAACGAATGGGCGGACG
TGCTGTTCCACAGCGACGTGCTCTACCGCTGCCAGCGCGTGCTGCAGCTGCAGGGCGTGGAATGCGCGCGCATCGCCCAG
GCGCTGCAGATGCACCAGCCCTTCGAGCGGGACGGGGCGGTGGCGCGGGCCATGGCCGATCTGCGCGACGCGATCGCCTA
CCTGGAAGCCCAGGGCCGGGCCGAATGGCAGCGCCCCCTGCGCAGCCTGCGCGCGCTGGCGCGCAATCTCGGCACGCTGG
ACGCGCAACTCGATGCCGCGACCCATCCCGACGGCGGGGAGCGGGCGGGGGACAGCAGCCTGCTGGACCGCTCCCCGCGC
TCGCTGGCCGACGCCTGGGGCCGCGTGCGGGTGCAACTGCACCGCGGCTCGCCACTCTTCCGGCACGCGGTGCGGCTGTC
CCTGGCGCTGGCGGCGGGCCACGGCGTGATGCAACTGATCGATCCCGTGCATGGCTACTGGATCCCGCTGGCCACGCTGT
TCGTGTGCCAGCCCACGTACGGCGCGACGCTGGCGCGCGTGGCGCAGCGCATCGCCGGCACGGCCGTCGGCCTGGTCGTG
GGCTGGGCGCTGCTGCGCCTGTTCCCGAGCCTGCCGCTGCAGGCGCTCTTCGCGGTGGCCGCGGGGGTGCTGTTCTTCGT
CACCCGCACCACGCATTACCTGACGGCCACGGCCGCCATCACGCTGCTGGTGCTCATGTGCTTCAACCAGGCCACCGGCG
CGGCGAACGGGCTGATCCTGCCGCGCCTGCTGGACACCATGATCGGCAGTGCCATCGCCGCGGTGGCGATGCTGTGGGTG
CTGCCGGACTGGCAGGGACGCCGCCTGGCGGCCGTGGCGGCCCAGGCCCTGGCCGCGCATGCCCATTACCTGCGCGAGAT
CCTCTCGCAGTACGCCACCGGCAAGTCCGACGACCTGGACTACCGGCTCGCGCGGCGCAACGCGCACAACGCGGATGCGG
CGTTCTCCACGACCCTCTCGCACCTGCTGCAGGAGCCGCGCCACGTGCGATCGCATTCGCTGGCCGGCATGCGCATGCTG
GTGGCCTCGCACACCTTGCTGAGCTATCTCTCCGCCCTGGGCGCGCACCGGGCGGGGCCTGCGGGCCCTGCCGCGGACCT
GGCCCAGGAGGCCGGGGCGCATGCGGTGGCGCGGCTGGAGGCGCTGGCGGCCGCGCTGCGCCGGCAGGAGGGGGCTGCGC
TGGAGGATGCCGGGCGCGCGCAGGCGCTGGCGGCCGCGCTGGAACAGGCGGCGGATGCCATGGCGCTGCGGGGGGATGGT
GGTGCGGGGGAAGTGCCGGCGGAGACGTTGCGCATCCTGCTGACGCAGCTGGCGCTGGTGTGTGGGCAGATGGGGGCGAT
CGAGGGGGCTGTGCGGGAGTTGTTGGGGTGA

Upstream 100 bases:

>100_bases
GGTCTGCGCAATACCGGCTGAGGGCGCGGGCCTGCTTCTTGCTCGCGATGGTGCCGGCGCGCGATGGCGCCGTGCACGGA
CACCGGCGAAGGCAGCGTGA

Downstream 100 bases:

>100_bases
TTTTTTTCCCGGGGCCGGGATGTGCGCCCGGCGGCGCACCTACTTTCTTTTGCTTCGCCAAAAGAAAGTAGGCAAAGAAA
AGGCGAGCCCTGGTGTCTGC

Product: YccS/YhfK family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 756; Mature: 756

Protein sequence:

>756_residues
MEPRTTTTTMAAAGQAAERGRAGWLRRLWAQDAFVYSLRVFIALSGAMALCWWRDQVALVTPLFLGIIASALAETDDSWR
GRLRAVWVMLACFALAAFSVQLLLPHPAWFVAGLACSTFGFTMLGAIGERYRAIASATVILALYAAISASPGTVAGHVPA
GGPWHVPLLLLSGAAWYALLSLVWCAAFPHQRVRQNLAGLYDQLGAYLRLKASLFEPVRGVDVERRRLALAQTNGRLVAA
LNATKESIFSRWGAGARALPTGRMLRHLNLYFIAQDIHERASSSHHHYNEWADVLFHSDVLYRCQRVLQLQGVECARIAQ
ALQMHQPFERDGAVARAMADLRDAIAYLEAQGRAEWQRPLRSLRALARNLGTLDAQLDAATHPDGGERAGDSSLLDRSPR
SLADAWGRVRVQLHRGSPLFRHAVRLSLALAAGHGVMQLIDPVHGYWIPLATLFVCQPTYGATLARVAQRIAGTAVGLVV
GWALLRLFPSLPLQALFAVAAGVLFFVTRTTHYLTATAAITLLVLMCFNQATGAANGLILPRLLDTMIGSAIAAVAMLWV
LPDWQGRRLAAVAAQALAAHAHYLREILSQYATGKSDDLDYRLARRNAHNADAAFSTTLSHLLQEPRHVRSHSLAGMRML
VASHTLLSYLSALGAHRAGPAGPAADLAQEAGAHAVARLEALAAALRRQEGAALEDAGRAQALAAALEQAADAMALRGDG
GAGEVPAETLRILLTQLALVCGQMGAIEGAVRELLG

Sequences:

>Translated_756_residues
MEPRTTTTTMAAAGQAAERGRAGWLRRLWAQDAFVYSLRVFIALSGAMALCWWRDQVALVTPLFLGIIASALAETDDSWR
GRLRAVWVMLACFALAAFSVQLLLPHPAWFVAGLACSTFGFTMLGAIGERYRAIASATVILALYAAISASPGTVAGHVPA
GGPWHVPLLLLSGAAWYALLSLVWCAAFPHQRVRQNLAGLYDQLGAYLRLKASLFEPVRGVDVERRRLALAQTNGRLVAA
LNATKESIFSRWGAGARALPTGRMLRHLNLYFIAQDIHERASSSHHHYNEWADVLFHSDVLYRCQRVLQLQGVECARIAQ
ALQMHQPFERDGAVARAMADLRDAIAYLEAQGRAEWQRPLRSLRALARNLGTLDAQLDAATHPDGGERAGDSSLLDRSPR
SLADAWGRVRVQLHRGSPLFRHAVRLSLALAAGHGVMQLIDPVHGYWIPLATLFVCQPTYGATLARVAQRIAGTAVGLVV
GWALLRLFPSLPLQALFAVAAGVLFFVTRTTHYLTATAAITLLVLMCFNQATGAANGLILPRLLDTMIGSAIAAVAMLWV
LPDWQGRRLAAVAAQALAAHAHYLREILSQYATGKSDDLDYRLARRNAHNADAAFSTTLSHLLQEPRHVRSHSLAGMRML
VASHTLLSYLSALGAHRAGPAGPAADLAQEAGAHAVARLEALAAALRRQEGAALEDAGRAQALAAALEQAADAMALRGDG
GAGEVPAETLRILLTQLALVCGQMGAIEGAVRELLG
>Mature_756_residues
MEPRTTTTTMAAAGQAAERGRAGWLRRLWAQDAFVYSLRVFIALSGAMALCWWRDQVALVTPLFLGIIASALAETDDSWR
GRLRAVWVMLACFALAAFSVQLLLPHPAWFVAGLACSTFGFTMLGAIGERYRAIASATVILALYAAISASPGTVAGHVPA
GGPWHVPLLLLSGAAWYALLSLVWCAAFPHQRVRQNLAGLYDQLGAYLRLKASLFEPVRGVDVERRRLALAQTNGRLVAA
LNATKESIFSRWGAGARALPTGRMLRHLNLYFIAQDIHERASSSHHHYNEWADVLFHSDVLYRCQRVLQLQGVECARIAQ
ALQMHQPFERDGAVARAMADLRDAIAYLEAQGRAEWQRPLRSLRALARNLGTLDAQLDAATHPDGGERAGDSSLLDRSPR
SLADAWGRVRVQLHRGSPLFRHAVRLSLALAAGHGVMQLIDPVHGYWIPLATLFVCQPTYGATLARVAQRIAGTAVGLVV
GWALLRLFPSLPLQALFAVAAGVLFFVTRTTHYLTATAAITLLVLMCFNQATGAANGLILPRLLDTMIGSAIAAVAMLWV
LPDWQGRRLAAVAAQALAAHAHYLREILSQYATGKSDDLDYRLARRNAHNADAAFSTTLSHLLQEPRHVRSHSLAGMRML
VASHTLLSYLSALGAHRAGPAGPAADLAQEAGAHAVARLEALAAALRRQEGAALEDAGRAQALAAALEQAADAMALRGDG
GAGEVPAETLRILLTQLALVCGQMGAIEGAVRELLG

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=650, Percent_Identity=40.9230769230769, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI87082248, Length=543, Percent_Identity=26.7034990791897, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81364; Mature: 81364

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRTTTTTMAAAGQAAERGRAGWLRRLWAQDAFVYSLRVFIALSGAMALCWWRDQVALV
CCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TPLFLGIIASALAETDDSWRGRLRAVWVMLACFALAAFSVQLLLPHPAWFVAGLACSTFG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTMLGAIGERYRAIASATVILALYAAISASPGTVAGHVPAGGPWHVPLLLLSGAAWYALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
SLVWCAAFPHQRVRQNLAGLYDQLGAYLRLKASLFEPVRGVDVERRRLALAQTNGRLVAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHEECCCCEEEE
LNATKESIFSRWGAGARALPTGRMLRHLNLYFIAQDIHERASSSHHHYNEWADVLFHSDV
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LYRCQRVLQLQGVECARIAQALQMHQPFERDGAVARAMADLRDAIAYLEAQGRAEWQRPL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RSLRALARNLGTLDAQLDAATHPDGGERAGDSSLLDRSPRSLADAWGRVRVQLHRGSPLF
HHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEECCCHHH
RHAVRLSLALAAGHGVMQLIDPVHGYWIPLATLFVCQPTYGATLARVAQRIAGTAVGLVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GWALLRLFPSLPLQALFAVAAGVLFFVTRTTHYLTATAAITLLVLMCFNQATGAANGLIL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
PRLLDTMIGSAIAAVAMLWVLPDWQGRRLAAVAAQALAAHAHYLREILSQYATGKSDDLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
YRLARRNAHNADAAFSTTLSHLLQEPRHVRSHSLAGMRMLVASHTLLSYLSALGAHRAGP
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGPAADLAQEAGAHAVARLEALAAALRRQEGAALEDAGRAQALAAALEQAADAMALRGDG
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
GAGEVPAETLRILLTQLALVCGQMGAIEGAVRELLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPRTTTTTMAAAGQAAERGRAGWLRRLWAQDAFVYSLRVFIALSGAMALCWWRDQVALV
CCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TPLFLGIIASALAETDDSWRGRLRAVWVMLACFALAAFSVQLLLPHPAWFVAGLACSTFG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTMLGAIGERYRAIASATVILALYAAISASPGTVAGHVPAGGPWHVPLLLLSGAAWYALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
SLVWCAAFPHQRVRQNLAGLYDQLGAYLRLKASLFEPVRGVDVERRRLALAQTNGRLVAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHEECCCCEEEE
LNATKESIFSRWGAGARALPTGRMLRHLNLYFIAQDIHERASSSHHHYNEWADVLFHSDV
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LYRCQRVLQLQGVECARIAQALQMHQPFERDGAVARAMADLRDAIAYLEAQGRAEWQRPL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RSLRALARNLGTLDAQLDAATHPDGGERAGDSSLLDRSPRSLADAWGRVRVQLHRGSPLF
HHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHEEEEEECCCHHH
RHAVRLSLALAAGHGVMQLIDPVHGYWIPLATLFVCQPTYGATLARVAQRIAGTAVGLVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GWALLRLFPSLPLQALFAVAAGVLFFVTRTTHYLTATAAITLLVLMCFNQATGAANGLIL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
PRLLDTMIGSAIAAVAMLWVLPDWQGRRLAAVAAQALAAHAHYLREILSQYATGKSDDLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
YRLARRNAHNADAAFSTTLSHLLQEPRHVRSHSLAGMRMLVASHTLLSYLSALGAHRAGP
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGPAADLAQEAGAHAVARLEALAAALRRQEGAALEDAGRAQALAAALEQAADAMALRGDG
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
GAGEVPAETLRILLTQLALVCGQMGAIEGAVRELLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]