The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610423

Identifier: 120610423

GI number: 120610423

Start: 1901919

End: 1903928

Strand: Reverse

Name: 120610423

Synonym: Aave_1740

Alternate gene names: NA

Gene position: 1903928-1901919 (Counterclockwise)

Preceding gene: 120610424

Following gene: 120610422

Centisome position: 35.57

GC content: 71.94

Gene sequence:

>2010_bases
ATGAAGCGTGACGCCTTCACCCTCCCGCTCGCATTCCCCGGCGAGCTGATCATCGACAACTTCGCGGGCGGCGGCGGCAC
GTCAACCGGGCTGGAGGCCGCATTCGGCAGGCCCGTGGACATCGCCATCAACCACGACCCCGAGGCGCTGGCCATGCACG
CCATCAACCACCCGCACACCCAGCACCTGTGCGAGAGCGTGTGGGATGTGGACCCGATCGCCGTGACCGGGAACCAGCCG
GTGGGCCTCGTGTGGCTGTCGCCGGACTGCAAGCACTTCAGCAAGGCCAAGGGCGGCACGCCGGTGGCGAAGCACATCCG
CGGCCTGGCCTGGGTGGGCATGCGCTGGGTGGCGCTCTGCAAGCCCCGCGTGCTCATGCTCGAGAACGTCGAGGAGTTCC
AGACCTGGGGCCCGCTGCTGGTGGGAGCCGACGGCACCGCCCGCCCGGACCCCGCGCGCAAGGGTAAGACGTTCCAGAGC
TTCGTGCGGCAGCTGCGCGCGCACGGGTACGCAGTGGACTGGCGCGAGCTGCGCGCCTGCGACAACGGCGCGCCGACGAT
CCGCAAGCGCCTGTTCTTGATCGCGCGCCGCGACGGCCTGCCGATCCAGTGGCCCGAGCAGACGCACGCCGCGCCCACCG
ATCGCCGCGTGCTCGCCGGAAAGCTGGCGCCCTACCGCACGGCGGCCGAGTGCATCGACTTCAGCCTGGAGGCGGCCAGC
ATCTTCGACCGCCCGCGGCCGCTGGCCATCAACACCCAGCGCCGCGTCGCTAAGGGCCTGTTCCGGCACGTCCTGACCAG
CGCGGCCCCCTTCATCGTGGGCGTGGGCGGCAGGATGGGCCAGAGCCCCGCGCGCAGCGTGCACACGCCCGCGCAGACCA
TCACGGCCAAGGCGGACAGCTGCATCGCGCAGCCGGTGCTGACGCCCTACATGGTCAATACCCGCAACGGCGAGCGCGCC
GGCCAGCAGCCCCGCGTGCGCAGCGCCCAGGCGCCGTACTGGACGGTGACGGGCCTAGGATCACAGGGCGCGCTGGCGGC
GCCGGTGATCGCCCCGCTACGCGGCACCAGCGAGCAGCACCTGCAGTGCGACGATGCCCGGGAGCCGCTTTCCACCGTGT
CGGCCGGCGGCACGCACCACGCCCTGGCCGGCGCCGTGCTGGCGGCCGCGATCGTCACCAACACGACCGGGCACCCGGGC
GCGACGGCGGACACGCCGCTGGCGACCATCACCACCGGTGGCCACCATGCCATGGCGGCGATGCACATTACGAAGTTCAA
CACGGGCTCCGTGGGTTCCGGCCTGGACGAGCCCCTGCGCACCGTCACGGCCGGAGGAACGCCCAGCCGCCCCAGCACCG
GTATCCAGATGGGCATGGTGTCCGCGTTCCTGGAGCAGGCCAACGGCGGGTTCTACGACGGCGACGGCCGGCCCGTGGGA
GCCCCGGCCAGCACCATCACCAGCAGCGGCGCGCAGCAGCGGCTGGTGACGGCCTACCTGGTCAAGTACTACAGCGAAGG
CGGCCAGGACAGCGCCTGCGGCGCGCCGATGCACACCGTGCCGACCAAGGCCCGAATGGGCCTCGTGCAGACCGTGCAGG
TGCCGGCCGACTGCCTGGCGCCGGAGCACCAGGCCCGCGCGCGGCAGTGCGCCGAGCTGCTGCACACGCACCTGCCCGAG
CAGTTTCCCGACCCGGCCGGCCTGGTGCTGATGCAACACGCTGGCCAGTGGTGGGTGCTGGTGGACATCACGCTGCGCAT
GCTCAAGCCGGTGGAGCTGTTCCGCGCCCAGGGCTTCCCCGAGGACTACGTGATCCACGAGATCCCAGACCCTGCCCTGC
TCTTCGCGGGCGGGAAGCAGGCGGCACATCCGCTCGAGGTGCCGCGCATCCCGCTCACCGCCACGGCGCAGGTCCGCATG
TGCGGCAACAGCGTCAGCCCGCCGCAGGCCGAGGCCCTGGTCCGCGCCAACTTCGGACACGAGACGGCCTGGATGGCCGT
CGCCGCATGA

Upstream 100 bases:

>100_bases
CACCAAATCTGAAAAACAGGCTGCGGCACGATTTCAGACTTGACAACCCACTGATACCACCTGGCCCGCCGCGAGCGGGC
TTTTCCTTTTCGGAGCCCGC

Downstream 100 bases:

>100_bases
CCCCGCCCCACAGGGCACCACAACACAGGAGGCCGCAATGGCTGAATACCTCATCGCCCACGTCGGGCACACCGGAAAGT
GGGACGAGCATATTTGCTGG

Product: C-5 cytosine-specific DNA methylase

Products: NA

Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; DNA-Cytosine Methyltransferase; Cytosine-Specific Methylase; DNA Methylase; C-5 Cytosine-Specific DNA Methylase Superfamily; Prophage LambdaSo Type II DNA Methyltransferase; Type II Restriction- System DNA Cytosine-Specific Methylase; Cytosine Specific DNA Methyltransferase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Cytosine Methyltransferase Family Protein

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP
VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS
FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS
IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA
GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG
ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG
APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE
QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM
CGNSVSPPQAEALVRANFGHETAWMAVAA

Sequences:

>Translated_669_residues
MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP
VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS
FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS
IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA
GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG
ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG
APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE
QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM
CGNSVSPPQAEALVRANFGHETAWMAVAA
>Mature_669_residues
MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP
VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS
FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS
IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA
GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG
ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG
APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE
QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM
CGNSVSPPQAEALVRANFGHETAWMAVAA

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71353; Mature: 71353

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHT
CCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCHH
QHLCESVWDVDPIAVTGNQPVGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALC
HHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
KPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQSFVRQLRAHGYAVDWRELRAC
CCCEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHC
DNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS
CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHHH
IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADS
HHCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHH
CIAQPVLTPYMVNTRNGERAGQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQH
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHH
LQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPGATADTPLATITTGGHHAMAA
CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEE
MHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG
EEEEECCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCC
APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLA
CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHHEEECCHHHCC
PEHQARARQCAELLHTHLPEQFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFP
CHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC
EDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRMCGNSVSPPQAEALVRANFGH
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCC
ETAWMAVAA
CEEEEEEEC
>Mature Secondary Structure
MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHT
CCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCHH
QHLCESVWDVDPIAVTGNQPVGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALC
HHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
KPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQSFVRQLRAHGYAVDWRELRAC
CCCEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHC
DNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS
CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHHH
IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADS
HHCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHH
CIAQPVLTPYMVNTRNGERAGQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQH
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHH
LQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPGATADTPLATITTGGHHAMAA
CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEE
MHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG
EEEEECCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCC
APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLA
CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHHEEECCHHHCC
PEHQARARQCAELLHTHLPEQFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFP
CHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC
EDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRMCGNSVSPPQAEALVRANFGH
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCC
ETAWMAVAA
CEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA