| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610369
Identifier: 120610369
GI number: 120610369
Start: 1845873
End: 1846535
Strand: Reverse
Name: 120610369
Synonym: Aave_1686
Alternate gene names: NA
Gene position: 1846535-1845873 (Counterclockwise)
Preceding gene: 120610384
Following gene: 120610368
Centisome position: 34.5
GC content: 61.54
Gene sequence:
>663_bases ATGGCAACCGAATACGGCTCTCGGCTCCGCGCCGCCCGCAACCACGCAGGCCTGTCTCAGGTCGAACTTTCCAAGATCAC CGGCATCGCCCAGAGCACAATCTCGACAGCAGAGAGAACTGGCAATGGCTCGGCGGACACGCCGGTCTATGCCAGAGCGT GCGGGGTCGATGCGCACTGGCTTGCAACCGGCGAGGGTCAGATGCTCTCCCAGCCAGCTACGCCGACGAATGCCACTCCG TACGAGACAACCAAGGTGCGGCCGGTCTACGTGGTGGGCCGGGGAAATGGAGGAGCGATGCCGGAGAGACTATGGACCGA TGGGGACTTCCCTGTGGGCGGTACGGACGAGTGCGCGGATGTTGCTACGAACGATCCGCGGGCCTTCCTGATCAGGGTGG AGGGGCCATCCATGGTCCCGCGCTACAACCCTGGTGAGTACGCCTTGGTCGAACCAGATACCGAGCCCGAAATCGAAGAC GATGTACTGGTGCGTCTTGTTGACGGACAGACGATCCTCAAGCGCCTGCTTTCACGTCGCGGAGGCTGGCGTCTCGGAAG CTACAACTCCATGGACGTGCTTTTCTACAGCTTTGAGGAAGTCACCTGGGTCTATTACGTGGCCCACCCTGTCCCCCGCC GAAAGATCAAAGCTCGGTGCTGA
Upstream 100 bases:
>100_bases TTCTGCGATAACGGTGTTCCACTGCATGGCGATGAAGATAACGTATTTCCGTTATTTTACCAACGGATTTCTGTTATCGG AACTCCGTAGAGTGCGCGCC
Downstream 100 bases:
>100_bases TGCAGCACCCCCGCCTGAGCCCGCCGCGAGCGGGCTTTTTTACGCCCGCCCTCCGCCTATCGGAACGCGCGAGCATTCCA CGCTCCAGTTTTTGCAGCGC
Product: putative phage repressor
Products: NA
Alternate protein names: Phage Repressor; Cro/CI Family Transcriptional Regulator
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MATEYGSRLRAARNHAGLSQVELSKITGIAQSTISTAERTGNGSADTPVYARACGVDAHWLATGEGQMLSQPATPTNATP YETTKVRPVYVVGRGNGGAMPERLWTDGDFPVGGTDECADVATNDPRAFLIRVEGPSMVPRYNPGEYALVEPDTEPEIED DVLVRLVDGQTILKRLLSRRGGWRLGSYNSMDVLFYSFEEVTWVYYVAHPVPRRKIKARC
Sequences:
>Translated_220_residues MATEYGSRLRAARNHAGLSQVELSKITGIAQSTISTAERTGNGSADTPVYARACGVDAHWLATGEGQMLSQPATPTNATP YETTKVRPVYVVGRGNGGAMPERLWTDGDFPVGGTDECADVATNDPRAFLIRVEGPSMVPRYNPGEYALVEPDTEPEIED DVLVRLVDGQTILKRLLSRRGGWRLGSYNSMDVLFYSFEEVTWVYYVAHPVPRRKIKARC >Mature_219_residues ATEYGSRLRAARNHAGLSQVELSKITGIAQSTISTAERTGNGSADTPVYARACGVDAHWLATGEGQMLSQPATPTNATPY ETTKVRPVYVVGRGNGGAMPERLWTDGDFPVGGTDECADVATNDPRAFLIRVEGPSMVPRYNPGEYALVEPDTEPEIEDD VLVRLVDGQTILKRLLSRRGGWRLGSYNSMDVLFYSFEEVTWVYYVAHPVPRRKIKARC
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24139; Mature: 24008
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEYGSRLRAARNHAGLSQVELSKITGIAQSTISTAERTGNGSADTPVYARACGVDAHW CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE LATGEGQMLSQPATPTNATPYETTKVRPVYVVGRGNGGAMPERLWTDGDFPVGGTDECAD EECCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHH VATNDPRAFLIRVEGPSMVPRYNPGEYALVEPDTEPEIEDDVLVRLVDGQTILKRLLSRR HCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHC GGWRLGSYNSMDVLFYSFEEVTWVYYVAHPVPRRKIKARC CCEECCCCCCEEEEEEEECCEEEEEEEECCCCCCHHCCCC >Mature Secondary Structure ATEYGSRLRAARNHAGLSQVELSKITGIAQSTISTAERTGNGSADTPVYARACGVDAHW CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE LATGEGQMLSQPATPTNATPYETTKVRPVYVVGRGNGGAMPERLWTDGDFPVGGTDECAD EECCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHH VATNDPRAFLIRVEGPSMVPRYNPGEYALVEPDTEPEIEDDVLVRLVDGQTILKRLLSRR HCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHC GGWRLGSYNSMDVLFYSFEEVTWVYYVAHPVPRRKIKARC CCEECCCCCCEEEEEEEECCEEEEEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA