| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610360
Identifier: 120610360
GI number: 120610360
Start: 1833998
End: 1835353
Strand: Reverse
Name: 120610360
Synonym: Aave_1677
Alternate gene names: NA
Gene position: 1835353-1833998 (Counterclockwise)
Preceding gene: 120610361
Following gene: 120610359
Centisome position: 34.29
GC content: 67.18
Gene sequence:
>1356_bases ATGGACACCAACAACACGGCCGCCCGCGGGGCGGCACAATCCGAGGCCCTGCGCCTGGCCGCGATCGTGAATAGCGATGG GTACATCACCAACATCGAACGCAGACAGATCGCCGCCGAACTGCGCCGCCTGCACGCCCTCACCACTGCAGCACCGGCCG CCCAGGAGGCCGAGCCCGTCCTGGATGAATCCGAGGCAGAAGACCTCGCCCGTAGCGCGTTCGAGACCACCATGTCCTAC GGCGTGGATTTCGACGCCTTCCGGCGCCTCGCCATGGAGGTCCGCCGCCGCTGCTCTGCTCCGCGCCCCCAGGCGGATGC GGGAGCAGCAGCGATTGCGCCCGACATCTCGGCTGATCTGGAGCGGAGCGACTGGACCGCAGAAGAGGCCCTGCGCTGGT ACGCAGCCGGCAAGCACTACGACACCGTGCCCAACGGGGACGGCACCAGTAGCGCACGCATCCTAGACAACGGCGCCGTG GCGAGCAATGCGCTCAAGTCCCTCTCCCGCGAGTACGCCGAGCACAAGGGCGACGTGGCGCTGCAAGAGGCTGCAGCAGC GCCCCAGGCGCCCGCCGCACCCACCGCCGCCGAGCACGATCAGCTGCAGCGTACTGCCGTGGGCTGGCAGCAGCGCGCCG AGTTCGCCGAGCGGAACTGGCTGCAGTGCTACCGCGTCGCACTGTGCAATGGCGCCGATCCTGGCGACTTCAAGCACAAG CCGGGCGATGCATGGCACGCAACTCCGGCGCCCGCCGCAGGGGCAGCGCCAACGGATGCGGACACCGTGGACGTGGTGGG CGTTCGTGCAAGCGGCGAGCACGTCAACCTCGGCAAGATGCCAATGCCGCCCACCATGAAAGCTCGGGACATCGCAACGT CCCAGTTCGGGGGCTTCCAAGATGGGGATGGCTCCGACGCAGAGATGTGCTTTGGAGCCCTTGAGGAATTGTTGGCATGG CTCATCGCGCAGGGCTGGAATGGCTCATCGCACAGGGCTGGGGTGCCAGTGCCAACGGAGGCGGAGCCGCCGGACCACGG CCCCGGCAATTTCGCCGAAAGGTTGCGCGACGTGACCCACAAGCTTCGCGGCTCCAACGATGGGCTCACCGCTGTGGCAG ACAAGTGCGTGGCTATCGGCGTGGCGGCTGACGAGGCGCTCGCGCAGGCAGAGGACGCGGCAGAACACAACTTCAACATC ATCCATGCGTTCGACAACTGGCTCTTGGAGCAAGGGCATTACCAGTGCCCGCACACCGAGGACGCAGATGGCGCCATGGC CCCCGTGCTGAACTGGATTGCTAGCGTCAATGCCATGGTCGCCGCCCGCGCGCGGCAGGAAGGCGGTGCAGCATGA
Upstream 100 bases:
>100_bases GCGCCGACCAGCAGGCCGAAGAGCACGGGCTGAACCCGTCCGAGTGGGAGCCGCCCGCCGACGCTGCGGACGAAGGAATG AGCTACTGGGAAGAGTGAGC
Downstream 100 bases:
>100_bases ACATCATGGAAAAGACACCGGCCATGCTGAACATCCGCATCGACGGCATGACCTGGGAAGAAGTGCGCGACATGATTGAA GAGCGGTTTGGCGCGCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDTNNTAARGAAQSEALRLAAIVNSDGYITNIERRQIAAELRRLHALTTAAPAAQEAEPVLDESEAEDLARSAFETTMSY GVDFDAFRRLAMEVRRRCSAPRPQADAGAAAIAPDISADLERSDWTAEEALRWYAAGKHYDTVPNGDGTSSARILDNGAV ASNALKSLSREYAEHKGDVALQEAAAAPQAPAAPTAAEHDQLQRTAVGWQQRAEFAERNWLQCYRVALCNGADPGDFKHK PGDAWHATPAPAAGAAPTDADTVDVVGVRASGEHVNLGKMPMPPTMKARDIATSQFGGFQDGDGSDAEMCFGALEELLAW LIAQGWNGSSHRAGVPVPTEAEPPDHGPGNFAERLRDVTHKLRGSNDGLTAVADKCVAIGVAADEALAQAEDAAEHNFNI IHAFDNWLLEQGHYQCPHTEDADGAMAPVLNWIASVNAMVAARARQEGGAA
Sequences:
>Translated_451_residues MDTNNTAARGAAQSEALRLAAIVNSDGYITNIERRQIAAELRRLHALTTAAPAAQEAEPVLDESEAEDLARSAFETTMSY GVDFDAFRRLAMEVRRRCSAPRPQADAGAAAIAPDISADLERSDWTAEEALRWYAAGKHYDTVPNGDGTSSARILDNGAV ASNALKSLSREYAEHKGDVALQEAAAAPQAPAAPTAAEHDQLQRTAVGWQQRAEFAERNWLQCYRVALCNGADPGDFKHK PGDAWHATPAPAAGAAPTDADTVDVVGVRASGEHVNLGKMPMPPTMKARDIATSQFGGFQDGDGSDAEMCFGALEELLAW LIAQGWNGSSHRAGVPVPTEAEPPDHGPGNFAERLRDVTHKLRGSNDGLTAVADKCVAIGVAADEALAQAEDAAEHNFNI IHAFDNWLLEQGHYQCPHTEDADGAMAPVLNWIASVNAMVAARARQEGGAA >Mature_451_residues MDTNNTAARGAAQSEALRLAAIVNSDGYITNIERRQIAAELRRLHALTTAAPAAQEAEPVLDESEAEDLARSAFETTMSY GVDFDAFRRLAMEVRRRCSAPRPQADAGAAAIAPDISADLERSDWTAEEALRWYAAGKHYDTVPNGDGTSSARILDNGAV ASNALKSLSREYAEHKGDVALQEAAAAPQAPAAPTAAEHDQLQRTAVGWQQRAEFAERNWLQCYRVALCNGADPGDFKHK PGDAWHATPAPAAGAAPTDADTVDVVGVRASGEHVNLGKMPMPPTMKARDIATSQFGGFQDGDGSDAEMCFGALEELLAW LIAQGWNGSSHRAGVPVPTEAEPPDHGPGNFAERLRDVTHKLRGSNDGLTAVADKCVAIGVAADEALAQAEDAAEHNFNI IHAFDNWLLEQGHYQCPHTEDADGAMAPVLNWIASVNAMVAARARQEGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47899; Mature: 47899
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNNTAARGAAQSEALRLAAIVNSDGYITNIERRQIAAELRRLHALTTAAPAAQEAEPV CCCCCCHHCCCHHHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHCCCC LDESEAEDLARSAFETTMSYGVDFDAFRRLAMEVRRRCSAPRPQADAGAAAIAPDISADL CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCC ERSDWTAEEALRWYAAGKHYDTVPNGDGTSSARILDNGAVASNALKSLSREYAEHKGDVA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCH LQEAAAAPQAPAAPTAAEHDQLQRTAVGWQQRAEFAERNWLQCYRVALCNGADPGDFKHK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PGDAWHATPAPAAGAAPTDADTVDVVGVRASGEHVNLGKMPMPPTMKARDIATSQFGGFQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHCCCCC DGDGSDAEMCFGALEELLAWLIAQGWNGSSHRAGVPVPTEAEPPDHGPGNFAERLRDVTH CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KLRGSNDGLTAVADKCVAIGVAADEALAQAEDAAEHNFNIIHAFDNWLLEQGHYQCPHTE HHCCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCC DADGAMAPVLNWIASVNAMVAARARQEGGAA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTNNTAARGAAQSEALRLAAIVNSDGYITNIERRQIAAELRRLHALTTAAPAAQEAEPV CCCCCCHHCCCHHHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHCCCC LDESEAEDLARSAFETTMSYGVDFDAFRRLAMEVRRRCSAPRPQADAGAAAIAPDISADL CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCC ERSDWTAEEALRWYAAGKHYDTVPNGDGTSSARILDNGAVASNALKSLSREYAEHKGDVA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCH LQEAAAAPQAPAAPTAAEHDQLQRTAVGWQQRAEFAERNWLQCYRVALCNGADPGDFKHK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PGDAWHATPAPAAGAAPTDADTVDVVGVRASGEHVNLGKMPMPPTMKARDIATSQFGGFQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHCCCCC DGDGSDAEMCFGALEELLAWLIAQGWNGSSHRAGVPVPTEAEPPDHGPGNFAERLRDVTH CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KLRGSNDGLTAVADKCVAIGVAADEALAQAEDAAEHNFNIIHAFDNWLLEQGHYQCPHTE HHCCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCC DADGAMAPVLNWIASVNAMVAARARQEGGAA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA