| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is pfpI [H]
Identifier: 120610278
GI number: 120610278
Start: 1761186
End: 1761785
Strand: Reverse
Name: pfpI [H]
Synonym: Aave_1595
Alternate gene names: 120610278
Gene position: 1761785-1761186 (Counterclockwise)
Preceding gene: 120610279
Following gene: 120610277
Centisome position: 32.91
GC content: 69.67
Gene sequence:
>600_bases ATGGCATCTTCCTCCAACGGAACTTCCGCTTCCTCCTCCATGGCCCGTGGCCGCCGCATCGCCCTGCTCGTCACCGACGG CTTCGAGCAGGCCGAGCTGACCGGCCCCCGCGACGCCCTGGAAGGCGCCGGGTTCGACGCGCAGATCGTGGCCCCGAAGC CGGGCCAGGTCCAGGGCTTCAACCACGTGGACAAGGCCGACCGCTTCGACGTGGACCAGACGCTGGACCAGGCGTCGCCC GACGCATTCGACGCGGTCGTGCTGCCCGGCGGCGTCGTGAATGCCGACGAATTGCGTACCGACGAAAAGGCCCGGGCCTT CGTGCAGGCGATCGACCGCGCGGGCAAGCCCGTGGCCGTGATCTGCCACGGCGCCTGGCTGCTGATCGATGCGGGCCTGG TCAAGGGCAAAACCCTGACCAGCTGGCCGAGCCTCGCGACCGACCTGCGCAACGCCGGCGCCCAATGGGTGGACCGGCCC GTCCAGGTCGAGGGCCGCTGGATCAGCAGCCGCAAGCCCGACGACATCCCGCAGTTCAACGAACAGATCCTGAAGACGCT CCAGCAGGGCGCCGGCACGGAACGCGAAGCCCGCAGCTGA
Upstream 100 bases:
>100_bases CCGGCCCGTGCATGCCCACGGGCATCGTCGCCATCGGCCGACAGGCGTGCCCGCGCCCGGTGCCTAGATTGGAAGCTTTC CCTTTCCAGGAGCTTTCCCC
Downstream 100 bases:
>100_bases CCCGGAGAGACGCACCATGGTGACCCAGCTCGACTCCCCCGACGGCAAGCCCCGCAAGGACCCGGACCGCCCCAGCCCCA CCTTCGTGGAAACGGACGAC
Product: PfpI family intracellular peptidase
Products: NA
Alternate protein names: Intracellular protease I [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MASSSNGTSASSSMARGRRIALLVTDGFEQAELTGPRDALEGAGFDAQIVAPKPGQVQGFNHVDKADRFDVDQTLDQASP DAFDAVVLPGGVVNADELRTDEKARAFVQAIDRAGKPVAVICHGAWLLIDAGLVKGKTLTSWPSLATDLRNAGAQWVDRP VQVEGRWISSRKPDDIPQFNEQILKTLQQGAGTEREARS
Sequences:
>Translated_199_residues MASSSNGTSASSSMARGRRIALLVTDGFEQAELTGPRDALEGAGFDAQIVAPKPGQVQGFNHVDKADRFDVDQTLDQASP DAFDAVVLPGGVVNADELRTDEKARAFVQAIDRAGKPVAVICHGAWLLIDAGLVKGKTLTSWPSLATDLRNAGAQWVDRP VQVEGRWISSRKPDDIPQFNEQILKTLQQGAGTEREARS >Mature_198_residues ASSSNGTSASSSMARGRRIALLVTDGFEQAELTGPRDALEGAGFDAQIVAPKPGQVQGFNHVDKADRFDVDQTLDQASPD AFDAVVLPGGVVNADELRTDEKARAFVQAIDRAGKPVAVICHGAWLLIDAGLVKGKTLTSWPSLATDLRNAGAQWVDRPV QVEGRWISSRKPDDIPQFNEQILKTLQQGAGTEREARS
Specific function: Highly stable protease. Although the physiological function is unclear it is the dominant protease in P.furiosus [H]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PfpI endopeptidase domain [H]
Homologues:
Organism=Escherichia coli, GI87082219, Length=173, Percent_Identity=37.5722543352601, Blast_Score=119, Evalue=9e-29, Organism=Drosophila melanogaster, GI28571932, Length=178, Percent_Identity=29.2134831460674, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006286 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: NA
Molecular weight: Translated: 21293; Mature: 21162
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSNGTSASSSMARGRRIALLVTDGFEQAELTGPRDALEGAGFDAQIVAPKPGQVQGF CCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCC NHVDKADRFDVDQTLDQASPDAFDAVVLPGGVVNADELRTDEKARAFVQAIDRAGKPVAV CCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEE ICHGAWLLIDAGLVKGKTLTSWPSLATDLRNAGAQWVDRPVQVEGRWISSRKPDDIPQFN EECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEEECCEEECCCCCCCCHHHH EQILKTLQQGAGTEREARS HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ASSSNGTSASSSMARGRRIALLVTDGFEQAELTGPRDALEGAGFDAQIVAPKPGQVQGF CCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCC NHVDKADRFDVDQTLDQASPDAFDAVVLPGGVVNADELRTDEKARAFVQAIDRAGKPVAV CCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEE ICHGAWLLIDAGLVKGKTLTSWPSLATDLRNAGAQWVDRPVQVEGRWISSRKPDDIPQFN EECCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEEECCEEECCCCCCCCHHHH EQILKTLQQGAGTEREARS HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8626329 [H]