| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610277
Identifier: 120610277
GI number: 120610277
Start: 1760385
End: 1760906
Strand: Reverse
Name: 120610277
Synonym: Aave_1594
Alternate gene names: NA
Gene position: 1760906-1760385 (Counterclockwise)
Preceding gene: 120610278
Following gene: 120610276
Centisome position: 32.9
GC content: 74.52
Gene sequence:
>522_bases ATGCCACCATATCGACCCGCGACGCCGGCTGGCGCGGCACGCGCCACCCGCCGCGCCATGCGCCACCTCATCCTCGCCGC CGCGCTGTCTTGCCTGGCCATGCCGGGCGGCGCCCAGCCGGTCTATCGCTGCGGCAACACGTACGGACAGCAAGCCTGCC GGGGCGGCCGTGTGGTGGATACCGCCCCGCAGATCATTTCGTCCGGCCCGGCGCAGGGAACCTCCACCGTCTATTTCTGC CGCGGCCGGGCGGGCGGCAGGTTCTGGACACCCCGCCACTGCCATGAGCACGGGGCCTGGGTGGACCGCACCGAAACCGT GCCCGCGGGGATGCCGTGGGAAGAACAGCGCGCCGCAGCCATCGCCCAGCGCCGGCAGATGGGCGCGCTCGCGGCCCCCG CGCCGCGCCGGCGATCGGCCAATGACGGTCTGGCTGCGAGCCATCGCCGGACCGGCCCGCCACGGCGCCCGCCGCATCCA CGGCCCGCCGGAACCGCTCGTCCAGCACCGCACTCACGTTGA
Upstream 100 bases:
>100_bases ACGGCCTCACAGACTGAAACGGTGCGGCGGCCACCCCGGCCTATCATGGTTCCGCCATTCAGAAGAGGCCCGCGCACCGG GCCCTGTCCAGGGAGGGACC
Downstream 100 bases:
>100_bases GCATGCCGGTGCGGTGGATGCTCCGCCCTACACTGTCGGGCCATCGCAACCCTTCCCTGCGGAGAGAAAGCACCCATGGC CACACACACCGCCACCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPPYRPATPAGAARATRRAMRHLILAAALSCLAMPGGAQPVYRCGNTYGQQACRGGRVVDTAPQIISSGPAQGTSTVYFC RGRAGGRFWTPRHCHEHGAWVDRTETVPAGMPWEEQRAAAIAQRRQMGALAAPAPRRRSANDGLAASHRRTGPPRRPPHP RPAGTARPAPHSR
Sequences:
>Translated_173_residues MPPYRPATPAGAARATRRAMRHLILAAALSCLAMPGGAQPVYRCGNTYGQQACRGGRVVDTAPQIISSGPAQGTSTVYFC RGRAGGRFWTPRHCHEHGAWVDRTETVPAGMPWEEQRAAAIAQRRQMGALAAPAPRRRSANDGLAASHRRTGPPRRPPHP RPAGTARPAPHSR >Mature_172_residues PPYRPATPAGAARATRRAMRHLILAAALSCLAMPGGAQPVYRCGNTYGQQACRGGRVVDTAPQIISSGPAQGTSTVYFCR GRAGGRFWTPRHCHEHGAWVDRTETVPAGMPWEEQRAAAIAQRRQMGALAAPAPRRRSANDGLAASHRRTGPPRRPPHPR PAGTARPAPHSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18549; Mature: 18418
Theoretical pI: Translated: 12.23; Mature: 12.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPYRPATPAGAARATRRAMRHLILAAALSCLAMPGGAQPVYRCGNTYGQQACRGGRVVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCC TAPQIISSGPAQGTSTVYFCRGRAGGRFWTPRHCHEHGAWVDRTETVPAGMPWEEQRAAA CHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH IAQRRQMGALAAPAPRRRSANDGLAASHRRTGPPRRPPHPRPAGTARPAPHSR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPYRPATPAGAARATRRAMRHLILAAALSCLAMPGGAQPVYRCGNTYGQQACRGGRVVD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCC TAPQIISSGPAQGTSTVYFCRGRAGGRFWTPRHCHEHGAWVDRTETVPAGMPWEEQRAAA CHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH IAQRRQMGALAAPAPRRRSANDGLAASHRRTGPPRRPPHPRPAGTARPAPHSR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA