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The map label for this gene is hopW1-1 [H]

Identifier: 120610233

GI number: 120610233

Start: 1714572

End: 1716029

Strand: Reverse

Name: hopW1-1 [H]

Synonym: Aave_1548

Alternate gene names: 120610233

Gene position: 1716029-1714572 (Counterclockwise)

Preceding gene: 120610239

Following gene: 120610232

Centisome position: 32.06

GC content: 67.49

Gene sequence:

>1458_bases
ATGCCTCTACAGTCCATTTCCATCCATCGCCTGGATGCCGTCCGCGCAGCCTTTCCATTCGGCAACACGCCGACGGGCAG
TTCATCCCGCCCCCGCGCCGGAGAATCTCCCAGACTCCCCCGTCCCCAAGGACTGTCGCCACGCAGTACCGGCGCAAGAC
AACTGCCCTGTCCCGTGGCCCGGGAGGCCGCAGCCCAACCGGCAGTGGCGCTCGAGCGCTCGCGCCTCGGCTGGACGCAG
GCCGGAACCATCGCAGACCGGTGCATCCACAAGGCCCTGTCCCTGCTGGGCCTTCGCACGGCGCGCGACCAGGCAGCGGA
TTTCATCCGCTTCATGGCCGATGCGGACGGCCAGCCCGGCACTTCCTCGTTGCCGCTGGGGGACGGCTGGGTGCGCAATA
CCCGGAGGGTGAAAGACCAGGTCGCCACGCTGGACCTGCGCATGGACACGAATGGCGCCATCATCGACGTGCGGCGACCT
GAGCAACCGTCCCGCATTGCCGAGGGCCAGGAGCGGGAGACCTTCGCCATGGTGCTCGAAGAGATGCGCAGCCGGGGGAA
GGACATGCTGCGCCCCGTGCCCGTCCACTACGTGAATCGCAACACGCATGGCTATTTCCTGCCCACGCACGGATATGTCG
TGGCAGGCGATCCTGGCAAGGGGCGCAAGAGCGGTGCCGTGCTCTACGGGGTCGGAGGAGACCCCGTCCGCGGTCCGGTC
CTGCTGGACCGCCCGCTCTTGAAGCACCTGCTGTCCAGCATGGACAAGGCCGGGCCTGCACGCTTTCCAGCGGCCGTCCG
CGCCACTATCGCGCAACTGGCCGGGCAACGGTTCGCAAGCCGCGAAGATTTCTTCAACGGCTACCGGTCCGTGCGCGGTG
ACGCCGTGGATCCTGCAGCAATCCGCAAGGAAGTCGCCTCGATTTACCGGCTGCTCCCCATGAACACCATGGAGTCGTGG
CCGAAAACGACGGGCGACTACCGCGCTCCCCGGCCCCCGGCACCGGAACGGGACATCCGTGCGTTCGAAAGCCCGCCGCA
AGGGTTGGCGCGCAAGGTATACATGCGCCGGATCGAGGGCGCGCGCCAAACCGACCTGCAGGACGCCAGGCGGCAGTTCC
TGCTGCACCGGCTCTACCAGGACGAGTTGATGGGCCGCGACGGATCGGGCTTTCCTCCGGAATCCGTGCAGCCGCGGGCG
GACTCGCCACGGCGCCATCGACTGGTGGAGAATACGCCGCGCTTCCAGCGCCTTCCGCCCCATGCGTCGGGCAAGGTCGG
CAACTGCAATTCGGGTGCGGCGTCCCTGCTGCAGCGTGCCATGGACAACCACGCGCGCAGCACGCCCGGCGCACGGGCCG
GCAAAGCGGCAGCAGCAAGCGTTTTCGGATTGGGTTCAGGGCATCGCATCGACCTCTGGGATCCCTTGCAGGATGCTCGG
ACGGGGGATCAACCATGA

Upstream 100 bases:

>100_bases
GGGCAGTTTTTCGCCCATGCACCGGGTGCGCAGCGCATGCGTGCGCATATTCGGAATTTTCACGCCCGCCCACGCTGAGC
CCGCCCCGCAAGGGTATCCG

Downstream 100 bases:

>100_bases
GGGCATCTTCGGTCCGCGACACCCCTGCAGTCCGTCCACCCGCTGCTCCGGAGCGCAATCCCAGGAACAACGGCAGCGCC
AGGACCGGTACGGCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III effector hopPmaA [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MPLQSISIHRLDAVRAAFPFGNTPTGSSSRPRAGESPRLPRPQGLSPRSTGARQLPCPVAREAAAQPAVALERSRLGWTQ
AGTIADRCIHKALSLLGLRTARDQAADFIRFMADADGQPGTSSLPLGDGWVRNTRRVKDQVATLDLRMDTNGAIIDVRRP
EQPSRIAEGQERETFAMVLEEMRSRGKDMLRPVPVHYVNRNTHGYFLPTHGYVVAGDPGKGRKSGAVLYGVGGDPVRGPV
LLDRPLLKHLLSSMDKAGPARFPAAVRATIAQLAGQRFASREDFFNGYRSVRGDAVDPAAIRKEVASIYRLLPMNTMESW
PKTTGDYRAPRPPAPERDIRAFESPPQGLARKVYMRRIEGARQTDLQDARRQFLLHRLYQDELMGRDGSGFPPESVQPRA
DSPRRHRLVENTPRFQRLPPHASGKVGNCNSGAASLLQRAMDNHARSTPGARAGKAAAASVFGLGSGHRIDLWDPLQDAR
TGDQP

Sequences:

>Translated_485_residues
MPLQSISIHRLDAVRAAFPFGNTPTGSSSRPRAGESPRLPRPQGLSPRSTGARQLPCPVAREAAAQPAVALERSRLGWTQ
AGTIADRCIHKALSLLGLRTARDQAADFIRFMADADGQPGTSSLPLGDGWVRNTRRVKDQVATLDLRMDTNGAIIDVRRP
EQPSRIAEGQERETFAMVLEEMRSRGKDMLRPVPVHYVNRNTHGYFLPTHGYVVAGDPGKGRKSGAVLYGVGGDPVRGPV
LLDRPLLKHLLSSMDKAGPARFPAAVRATIAQLAGQRFASREDFFNGYRSVRGDAVDPAAIRKEVASIYRLLPMNTMESW
PKTTGDYRAPRPPAPERDIRAFESPPQGLARKVYMRRIEGARQTDLQDARRQFLLHRLYQDELMGRDGSGFPPESVQPRA
DSPRRHRLVENTPRFQRLPPHASGKVGNCNSGAASLLQRAMDNHARSTPGARAGKAAAASVFGLGSGHRIDLWDPLQDAR
TGDQP
>Mature_484_residues
PLQSISIHRLDAVRAAFPFGNTPTGSSSRPRAGESPRLPRPQGLSPRSTGARQLPCPVAREAAAQPAVALERSRLGWTQA
GTIADRCIHKALSLLGLRTARDQAADFIRFMADADGQPGTSSLPLGDGWVRNTRRVKDQVATLDLRMDTNGAIIDVRRPE
QPSRIAEGQERETFAMVLEEMRSRGKDMLRPVPVHYVNRNTHGYFLPTHGYVVAGDPGKGRKSGAVLYGVGGDPVRGPVL
LDRPLLKHLLSSMDKAGPARFPAAVRATIAQLAGQRFASREDFFNGYRSVRGDAVDPAAIRKEVASIYRLLPMNTMESWP
KTTGDYRAPRPPAPERDIRAFESPPQGLARKVYMRRIEGARQTDLQDARRQFLLHRLYQDELMGRDGSGFPPESVQPRAD
SPRRHRLVENTPRFQRLPPHASGKVGNCNSGAASLLQRAMDNHARSTPGARAGKAAAASVFGLGSGHRIDLWDPLQDART
GDQP

Specific function: Induces hypersensitive response (HR) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hopW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53154; Mature: 53023

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQSISIHRLDAVRAAFPFGNTPTGSSSRPRAGESPRLPRPQGLSPRSTGARQLPCPVA
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
REAAAQPAVALERSRLGWTQAGTIADRCIHKALSLLGLRTARDQAADFIRFMADADGQPG
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSSLPLGDGWVRNTRRVKDQVATLDLRMDTNGAIIDVRRPEQPSRIAEGQERETFAMVLE
CCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHCCCHHHHHHHHHH
EMRSRGKDMLRPVPVHYVNRNTHGYFLPTHGYVVAGDPGKGRKSGAVLYGVGGDPVRGPV
HHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCE
LLDRPLLKHLLSSMDKAGPARFPAAVRATIAQLAGQRFASREDFFNGYRSVRGDAVDPAA
EECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IRKEVASIYRLLPMNTMESWPKTTGDYRAPRPPAPERDIRAFESPPQGLARKVYMRRIEG
HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCC
ARQTDLQDARRQFLLHRLYQDELMGRDGSGFPPESVQPRADSPRRHRLVENTPRFQRLPP
CHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCC
HASGKVGNCNSGAASLLQRAMDNHARSTPGARAGKAAAASVFGLGSGHRIDLWDPLQDAR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEECCCCCHHHCC
TGDQP
CCCCC
>Mature Secondary Structure 
PLQSISIHRLDAVRAAFPFGNTPTGSSSRPRAGESPRLPRPQGLSPRSTGARQLPCPVA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
REAAAQPAVALERSRLGWTQAGTIADRCIHKALSLLGLRTARDQAADFIRFMADADGQPG
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSSLPLGDGWVRNTRRVKDQVATLDLRMDTNGAIIDVRRPEQPSRIAEGQERETFAMVLE
CCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHCCCHHHHHHHHHH
EMRSRGKDMLRPVPVHYVNRNTHGYFLPTHGYVVAGDPGKGRKSGAVLYGVGGDPVRGPV
HHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCE
LLDRPLLKHLLSSMDKAGPARFPAAVRATIAQLAGQRFASREDFFNGYRSVRGDAVDPAA
EECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IRKEVASIYRLLPMNTMESWPKTTGDYRAPRPPAPERDIRAFESPPQGLARKVYMRRIEG
HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCC
ARQTDLQDARRQFLLHRLYQDELMGRDGSGFPPESVQPRADSPRRHRLVENTPRFQRLPP
CHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCC
HASGKVGNCNSGAASLLQRAMDNHARSTPGARAGKAAAASVFGLGSGHRIDLWDPLQDAR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEECCCCCHHHCC
TGDQP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11872842 [H]