Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610201
Identifier: 120610201
GI number: 120610201
Start: 1681587
End: 1682357
Strand: Reverse
Name: 120610201
Synonym: Aave_1516
Alternate gene names: NA
Gene position: 1682357-1681587 (Counterclockwise)
Preceding gene: 120610202
Following gene: 120610197
Centisome position: 31.43
GC content: 60.7
Gene sequence:
>771_bases ATGCAGCCCCGGACCGAGATCCGGCGGCTGAGTCAGCACGGCACACTTGCCCATGCCTCAGAGCAGATGGCGCGCGAGGT CCTGGCAAGCATCCCGCTCGGGCGTCTCAAGAGCGAGCTTTCTTCCGAATTGCTGCATGTCGTGCATTCGGTCGCATACG CACCCGACGACAGGTTTGGCACCCTCAAGGGCAAGCTGTCCTTCGACTACGCACTGGCACTGGTCCGCGGCAAGCATCGC ATCGAGCCTGCCCAGATTCGCCAGTCCTGGGCCGCTGCCCCCGCCGGGTTGGCCCTGAGAACATATGACTCTTCGGAAAT TGCCAAGATTCGGCAGCATGGGGCTTCATTCATGGCCCTTCCTTGGCCAACCTTATCCACTGTATCCGGTAGATCCCAGA CGGGGAAAACCGTCTTTCGACCGGCAAACCAGATACCCGCGGATCTGAACAAACTCTGCGACGAAGTCAAGAAAATGCTT CGCCAACCCAGGCACGGCGGTGCCCTGGAGGGCGCCTTGGTGGCGGCCCACTTCAAGCAAAACTTCATTGCCATCCACCC CTACATGGATGGAAACGGACGCGTGAGCAGGCTGATGGCCGAACGCATCCTCCACGAATTCGGACTTCCTGCTCCAGACT GGAGCCAAGGGAATTTCGATCTGAATCTCGGCGTGGAAGACGCCGCGCTACTGATATTGCAGCACCTTCCGAAGGCGCCG GCAAACCCCGCGGCGCCCGGATACGCCACGGTGGCCCATCTCCCATCCTGA
Upstream 100 bases:
>100_bases AATACGCAGCCTCGGGCTGCTTGATCGACGCGACAACTACCTTGACATGCTCCGGGGACTGCAAGGCGCACCTGCCCGCC CAGTTTCGGTCCGGGGCCAA
Downstream 100 bases:
>100_bases CTTTTCAGCCAGGTGGTTGCAGCCGGTGACCAGACGGCATGACAAAGCCGGATCCATCGGCGACCCAGGAATAAGCCGCA GGCACGAACAAATGGCTGCA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQPRTEIRRLSQHGTLAHASEQMAREVLASIPLGRLKSELSSELLHVVHSVAYAPDDRFGTLKGKLSFDYALALVRGKHR IEPAQIRQSWAAAPAGLALRTYDSSEIAKIRQHGASFMALPWPTLSTVSGRSQTGKTVFRPANQIPADLNKLCDEVKKML RQPRHGGALEGALVAAHFKQNFIAIHPYMDGNGRVSRLMAERILHEFGLPAPDWSQGNFDLNLGVEDAALLILQHLPKAP ANPAAPGYATVAHLPS
Sequences:
>Translated_256_residues MQPRTEIRRLSQHGTLAHASEQMAREVLASIPLGRLKSELSSELLHVVHSVAYAPDDRFGTLKGKLSFDYALALVRGKHR IEPAQIRQSWAAAPAGLALRTYDSSEIAKIRQHGASFMALPWPTLSTVSGRSQTGKTVFRPANQIPADLNKLCDEVKKML RQPRHGGALEGALVAAHFKQNFIAIHPYMDGNGRVSRLMAERILHEFGLPAPDWSQGNFDLNLGVEDAALLILQHLPKAP ANPAAPGYATVAHLPS >Mature_256_residues MQPRTEIRRLSQHGTLAHASEQMAREVLASIPLGRLKSELSSELLHVVHSVAYAPDDRFGTLKGKLSFDYALALVRGKHR IEPAQIRQSWAAAPAGLALRTYDSSEIAKIRQHGASFMALPWPTLSTVSGRSQTGKTVFRPANQIPADLNKLCDEVKKML RQPRHGGALEGALVAAHFKQNFIAIHPYMDGNGRVSRLMAERILHEFGLPAPDWSQGNFDLNLGVEDAALLILQHLPKAP ANPAAPGYATVAHLPS
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27975; Mature: 27975
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPRTEIRRLSQHGTLAHASEQMAREVLASIPLGRLKSELSSELLHVVHSVAYAPDDRFG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLKGKLSFDYALALVRGKHRIEPAQIRQSWAAAPAGLALRTYDSSEIAKIRQHGASFMAL CEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEE PWPTLSTVSGRSQTGKTVFRPANQIPADLNKLCDEVKKMLRQPRHGGALEGALVAAHFKQ CCCCHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC NFIAIHPYMDGNGRVSRLMAERILHEFGLPAPDWSQGNFDLNLGVEDAALLILQHLPKAP CEEEEECEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC ANPAAPGYATVAHLPS CCCCCCCCEEECCCCC >Mature Secondary Structure MQPRTEIRRLSQHGTLAHASEQMAREVLASIPLGRLKSELSSELLHVVHSVAYAPDDRFG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLKGKLSFDYALALVRGKHRIEPAQIRQSWAAAPAGLALRTYDSSEIAKIRQHGASFMAL CEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEE PWPTLSTVSGRSQTGKTVFRPANQIPADLNKLCDEVKKMLRQPRHGGALEGALVAAHFKQ CCCCHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC NFIAIHPYMDGNGRVSRLMAERILHEFGLPAPDWSQGNFDLNLGVEDAALLILQHLPKAP CEEEEECEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC ANPAAPGYATVAHLPS CCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA