Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610089
Identifier: 120610089
GI number: 120610089
Start: 1537800
End: 1538297
Strand: Direct
Name: 120610089
Synonym: Aave_1402
Alternate gene names: NA
Gene position: 1537800-1538297 (Clockwise)
Preceding gene: 120610088
Following gene: 120610090
Centisome position: 28.73
GC content: 60.24
Gene sequence:
>498_bases ATGCACGACATCCATCAAATCCGAAAGCTTATTCGGTGGGGCATTCCGCTGTATCTCGGGCTCGTGGCAGGCGCGTTGCT GATGATCCGCAACGCCTTGGTGCCCATGGTTCACGACATCCTGTCGAAGGCGCCTGTAGTGCGGATCACGCCGGGCATGC ACCTCATGCCGTGCGTCGTCGCTTTCGGCTCACTGGCAATCGTCGTCATGGTGATGCGGGCGATCCCTTGCCGCCCCAGC CTCATCAAGAAGTTTGAGATTGCGGCCAACTTGGCTGTCGCAGCCAGCGCCATTGCGCTCCTGTTGGTCCCCGTGGTCGC TATCGCCCAGCGTTACTACATGCCCAGCATTGGCTACACCCAATGCTATGTCCTGCAGGGCCAGCCCACGTTGTGGTTCA CGGACTGGGTTCGCGATCCAGCATGGTGTGTGAAGGGCAAGAGTCCGGAATGGTTGAACGAGCAGGTGCAGCAGTCCAGG CCGATCGCGCCTCTGTGA
Upstream 100 bases:
>100_bases GAGCCGCTCCATCGAGCGTGGCATGAAGGAGTGGTTCTGCCGAATAAGCTGCGTGCTCCATCACGCGCCTCACTGACCTG ATCACATCGCCAAGTCATCC
Downstream 100 bases:
>100_bases ACAGCCTAATGGTGCCGCTACTGGCTCCTCGCAGCCTGGTGGTGCTTGGTGTGTCAGAACAGGTATCTCACTCGAACACC CGAACCTGCCTTCCATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MHDIHQIRKLIRWGIPLYLGLVAGALLMIRNALVPMVHDILSKAPVVRITPGMHLMPCVVAFGSLAIVVMVMRAIPCRPS LIKKFEIAANLAVAASAIALLLVPVVAIAQRYYMPSIGYTQCYVLQGQPTLWFTDWVRDPAWCVKGKSPEWLNEQVQQSR PIAPL
Sequences:
>Translated_165_residues MHDIHQIRKLIRWGIPLYLGLVAGALLMIRNALVPMVHDILSKAPVVRITPGMHLMPCVVAFGSLAIVVMVMRAIPCRPS LIKKFEIAANLAVAASAIALLLVPVVAIAQRYYMPSIGYTQCYVLQGQPTLWFTDWVRDPAWCVKGKSPEWLNEQVQQSR PIAPL >Mature_165_residues MHDIHQIRKLIRWGIPLYLGLVAGALLMIRNALVPMVHDILSKAPVVRITPGMHLMPCVVAFGSLAIVVMVMRAIPCRPS LIKKFEIAANLAVAASAIALLLVPVVAIAQRYYMPSIGYTQCYVLQGQPTLWFTDWVRDPAWCVKGKSPEWLNEQVQQSR PIAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18348; Mature: 18348
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDIHQIRKLIRWGIPLYLGLVAGALLMIRNALVPMVHDILSKAPVVRITPGMHLMPCVV CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH AFGSLAIVVMVMRAIPCRPSLIKKFEIAANLAVAASAIALLLVPVVAIAQRYYMPSIGYT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QCYVLQGQPTLWFTDWVRDPAWCVKGKSPEWLNEQVQQSRPIAPL EEEEECCCCCEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MHDIHQIRKLIRWGIPLYLGLVAGALLMIRNALVPMVHDILSKAPVVRITPGMHLMPCVV CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH AFGSLAIVVMVMRAIPCRPSLIKKFEIAANLAVAASAIALLLVPVVAIAQRYYMPSIGYT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QCYVLQGQPTLWFTDWVRDPAWCVKGKSPEWLNEQVQQSRPIAPL EEEEECCCCCEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA