Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is ydiA [C]
Identifier: 120610068
GI number: 120610068
Start: 1513745
End: 1514566
Strand: Reverse
Name: ydiA [C]
Synonym: Aave_1381
Alternate gene names: 120610068
Gene position: 1514566-1513745 (Counterclockwise)
Preceding gene: 120610073
Following gene: 120610066
Centisome position: 28.29
GC content: 65.82
Gene sequence:
>822_bases ATGCACACGCGCACCGTATTCTTCATCTCCGACGGCACCGGCATCACCGCCGAAACCTTCGGCAACGCCATCCTGGCGCA GTTCGACATCAAGCCGCGCCATGTGCGCCTGCCCTTCATCGACACCGAGGACAAGGCCCACCAGGCCGTGCGCCGCATCA ACCACACGGCCGAGCTGGAGGGCAAGAAGCCCATCGTGTTCACCACGCTGGTCAACATGAGCGTGCTGCGCATCATCCAG GAGAACTGCCAGGGCATGCTGCTGGACATGTTCGGCACCTTCATCCGCCCGCTGGAGGGCGAACTCGGCATCAAGTCGCT GCACCGCGTGGGCCGCTTCGCGGACGTGAGCCTGAGCAAGGAATACACCGACCGCATCGAGGCCATCAACTTCAGCCTGG ACCACGACGACGGCCAGAGCCACCGCGACCTGAGCGGCGCGGACGTGATCCTGGTGGGCGTGTCGCGCAGCGGCAAGACC CCCACCAGCCTCTACCTGGCCATGCAGTGCGGCCTGAAGGTGGCCAACTACCCGCTCATCCCCGAGGATTTCGAGCGCAA GCAATTGCCGCCCGCGCTGGAGCCGCACCGCAAGAAGATCTTCGGCCTGACCATCCTGCCCGAGCGGCTCTCGCAGATCC GCAACGAACGCCGGCCGGGCTCGAAATACGCCGACCTCGCCAACTGCCGCCACGAGGTGGCCGAGGCCGAGGCGATGATG CGGCGCTCGGGCATCCGGTGGCTCTCGACCACCACGAAGAGCATCGAGGAGATCGCGACGACGATCCTGCAGGAGGTGCG GCCGGAGCGGCTGGTGTATTGA
Upstream 100 bases:
>100_bases AGGGCGGCCGGCCGCAAGGCGCTTGTGGGACACGGCCGGCCTCCGGTCCAGCCAGCAGCCCACCCAGCGAACGATCACCG CGGAAAGCCCCGACCCCTCC
Downstream 100 bases:
>100_bases TCCCCGCCGTCAGTCCTCGTCCTCCACCAGCAGGCAGGTGGCCACGGCGGGGCACACCACCAGCACCGCCGCGCTGAACG TCGCGGAGGTGAGCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY
Sequences:
>Translated_273_residues MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY >Mature_273_residues MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]
Homologues:
Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=45.0549450549451, Blast_Score=231, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005177 [H]
Pfam domain/function: PF03618 DUF299 [H]
EC number: NA
Molecular weight: Translated: 30910; Mature: 30910
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELE CCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCEEECCEECCCHHHHHHHHHHCCHHHCC GKKPIVFTTLVNMSVLRIIQENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCH EYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKTPTSLYLAMQCGLKVANYPLI HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEECCCCCC PEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM CCCHHHHCCCCCCCCHHHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELE CCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCEEECCEECCCHHHHHHHHHHCCHHHCC GKKPIVFTTLVNMSVLRIIQENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCH EYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKTPTSLYLAMQCGLKVANYPLI HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEECCCCCC PEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM CCCHHHHCCCCCCCCHHHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA