Click here to switch to the map view.

The map label for this gene is ybiL [C]

Identifier: 120610059

GI number: 120610059

Start: 1504262

End: 1505011

Strand: Reverse

Name: ybiL [C]

Synonym: Aave_1372

Alternate gene names: 120610059

Gene position: 1505011-1504262 (Counterclockwise)

Preceding gene: 120610061

Following gene: 120610058

Centisome position: 28.12

GC content: 72.53

Gene sequence:

>750_bases
ATGCTGTCCTCCCCCGTCTCCACCCCTCCCCTGCCCCGCCGCGCCACTGCCTGGGGCGGCCCTTCCGGCACCGCGCTGGC
CCGTGCGGGCCTGTGCTGCGGCGCAGTGCTGCTGACGGCCGTGTCCCTGGCCGCACGCGCGCAGGCCCAGGCCGGGAACG
AGCGCCCCGCAACGCTCGGCGAAGTGCAGGTGAACGCGGACCGTTCCGGCGAGGCGGGCACGCCCGCGCGCCGCGCGCAG
AGCGCATCGCGGCTGGGCCTGTCGGTGCTGGAGACGCCCCGCTCGGTGAGCGTGGTGGAGCGCGAGACGCTGGATCAGCA
GGGCGCCACCACCGAGCGCGAGGTGCTGCGCAACGCTTCCGGCGTGGCCTCGCGCAGCGAGTACTACGGCTCCTATTCGC
AGTTCTCGGTGCGCGGCCTGTGGGCCGACAACACCTACAACGACCTGCGGGACGGCGCCAAGTTCATGCACCTGATCGAT
CCGCCGCTGTTCAATATCGACCGGGTGGAAGTGATCAAGGGGCCCGCGGCGCTGGAATACGGCCAGGTCGCGCCAGGCGG
GCTGATCTACACGGTGGCCGACCTGGCCGTGGGCTGCGAGATGGCCGGCGGCCTGCGGCTGCAGGCCCACCTGAAGAACG
CCACGGACAAGCGCTACGACCTCGACGGCACGAGCGATGCCGCGGGCTTCGCCTCGGTCACGCCGGGCGAGGCGCGCGCG
CTGCAGGTCACGCTGGACTACGCCTTCTGA

Upstream 100 bases:

>100_bases
GCGTTGAACGGCGCTCCCACCGCAAGCCAGTCCGGACAGGGCCCCCGCGCCCCGGCAGCCAGCGCACTCAGGTCTTTTTG
CCGTCCCGAAGTCTGCCGCC

Downstream 100 bases:

>100_bases
CCACCCGGAAGCAGCCGCCATGAAACCCACCCGTCCCCTCTGGAAGTACCGCCTGGCCATCGCGTCGCGCGTGCTGGCTG
CCACGGTCGGCGGCTATGCG

Product: TonB-dependent receptor, plug

Products: NA

Alternate protein names: Ferrichrome-Iron Receptor; NB-Dependent Receptor Plug; NB-Dependent Receptor; Ferrichrome-Iron Transporter; NB-Dependent Receptor Protein; NB-Dependent Siderophore Receptor Protein; Putative Ferrichrome-Iron Receptor; NB-Dependent Siderophore Receptor Subfamily; Ferric Siderophore Receptor; NB Dependent Receptor; Ferrisiderophore Receptor Protein nB Dependent; Nb-Dependent Siderophore Receptor; N-B Dependent Protein; Hydroxamate-Type Ferrisiderophore Receptor; Outer Membrane Heme Receptor; Ferric Iron Uptake Protein; Ferrisiderophore Receptor Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLSSPVSTPPLPRRATAWGGPSGTALARAGLCCGAVLLTAVSLAARAQAQAGNERPATLGEVQVNADRSGEAGTPARRAQ
SASRLGLSVLETPRSVSVVERETLDQQGATTEREVLRNASGVASRSEYYGSYSQFSVRGLWADNTYNDLRDGAKFMHLID
PPLFNIDRVEVIKGPAALEYGQVAPGGLIYTVADLAVGCEMAGGLRLQAHLKNATDKRYDLDGTSDAAGFASVTPGEARA
LQVTLDYAF

Sequences:

>Translated_249_residues
MLSSPVSTPPLPRRATAWGGPSGTALARAGLCCGAVLLTAVSLAARAQAQAGNERPATLGEVQVNADRSGEAGTPARRAQ
SASRLGLSVLETPRSVSVVERETLDQQGATTEREVLRNASGVASRSEYYGSYSQFSVRGLWADNTYNDLRDGAKFMHLID
PPLFNIDRVEVIKGPAALEYGQVAPGGLIYTVADLAVGCEMAGGLRLQAHLKNATDKRYDLDGTSDAAGFASVTPGEARA
LQVTLDYAF
>Mature_249_residues
MLSSPVSTPPLPRRATAWGGPSGTALARAGLCCGAVLLTAVSLAARAQAQAGNERPATLGEVQVNADRSGEAGTPARRAQ
SASRLGLSVLETPRSVSVVERETLDQQGATTEREVLRNASGVASRSEYYGSYSQFSVRGLWADNTYNDLRDGAKFMHLID
PPLFNIDRVEVIKGPAALEYGQVAPGGLIYTVADLAVGCEMAGGLRLQAHLKNATDKRYDLDGTSDAAGFASVTPGEARA
LQVTLDYAF

Specific function: Probable Receptor, Tonb-Dependent, That Participates In Iron Transport. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787024, Length=172, Percent_Identity=31.9767441860465, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26170; Mature: 26170

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSPVSTPPLPRRATAWGGPSGTALARAGLCCGAVLLTAVSLAARAQAQAGNERPATLG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
EVQVNADRSGEAGTPARRAQSASRLGLSVLETPRSVSVVERETLDQQGATTEREVLRNAS
EEEECCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCC
GVASRSEYYGSYSQFSVRGLWADNTYNDLRDGAKFMHLIDPPLFNIDRVEVIKGPAALEY
CCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
GQVAPGGLIYTVADLAVGCEMAGGLRLQAHLKNATDKRYDLDGTSDAAGFASVTPGEARA
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEE
LQVTLDYAF
EEEEEEECC
>Mature Secondary Structure
MLSSPVSTPPLPRRATAWGGPSGTALARAGLCCGAVLLTAVSLAARAQAQAGNERPATLG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
EVQVNADRSGEAGTPARRAQSASRLGLSVLETPRSVSVVERETLDQQGATTEREVLRNAS
EEEECCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCC
GVASRSEYYGSYSQFSVRGLWADNTYNDLRDGAKFMHLIDPPLFNIDRVEVIKGPAALEY
CCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
GQVAPGGLIYTVADLAVGCEMAGGLRLQAHLKNATDKRYDLDGTSDAAGFASVTPGEARA
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEE
LQVTLDYAF
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA