Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610057
Identifier: 120610057
GI number: 120610057
Start: 1502249
End: 1503937
Strand: Reverse
Name: 120610057
Synonym: Aave_1370
Alternate gene names: NA
Gene position: 1503937-1502249 (Counterclockwise)
Preceding gene: 120610058
Following gene: 120610056
Centisome position: 28.1
GC content: 73.65
Gene sequence:
>1689_bases ATGACGGCTGCAGCGAACGACACCGCGCGCGCCGCCGCCGCGCCCGGGCGCGAGGGGTTCCGGCAGGCGATGTCCTGGGT CCACACCTGGGCGGGCCTGGTGCTGGGGTGGCTGCTGTTTGCCATCTTCGCCACCGGCACGCTGAGCTTTTTCAAGAGCG AATTCAATCTCTGGATGCGCCCGGAAATGCACGGGCTGGCAGCCCCGAGCCCCGACGTGGCGGACCGGGCGCAGGCCGCA CTGCACCGCCACGCGCCGGGCGTGACGCAGTGGTTCATGCGCCTGCCGGACGAGCGCCTGCCCGCCGTGACGGTGCTCTG GCGCGACAGTGCCAACGGCCGCTTCCAGACCCTGCTCATGGACCCGGCCACGGGCGAGTCGATCGGCACGCGCGAGACCA TGGGCGGCGAATTCTTCTACCGCTTCCACTTCGAGCTGCGCACGGCGCACCAGAGCCGCTGGGCGCTGCAGGGGCGCTGG ATCGTGGGGGTGGCGACGCTGCTGATGTTCATCGCGCTGCTCACGGGCGTGGTCACGCACCGGCGCATCTTCAAGGATTT CTTCACCTTCCGGCCCACCAAGGGCGGCCAGCGCGCCTGGCTGGACGCGCACAACGTCTCCGGCGTGCTGGCGCTGCCCT TCTACCTCGTCATCACCTTCAGCGGGCTGATGATCTTCCACACGCTCTACATGCCCGCCGGCATCGCGGCCGCCTACGCG ACGCCCGAGGGCACCGATTCGCAGGCCTATTTCGCTGAGATGCAGGGCGACGAGCCGGGCGCACGCAGCGCGCGGCGGGT CCGCGGGACGGCGGAAGCGGCCGCGCCCCTGCCGGCGCTGGACCTGGCCACGATGGTGGCGGGAGCCCACCGCACCTGGG GCGATGCCCGCATCGGCAACATTTCCGCGCGCCGCGACGCGGACGGCACGGTGGTGGAGGTCACGCGGCACGATGGCGAC CGGCTGCAGTACGGCCCCGCGCGGCTGCGCTTCGATGGTGCCACGGCGCGGCAGCTCGCGCTGATCGATCCGCAGACGCC CGCGATCAAGACCTACCGCGTGCTCTACGGGCTGCACCTCGCCCGCTTCGCGGGACCGGGCATGCGCTGGGCGCTGTTCG GCTTCGGCGTGCTGGGCAGCCTGATGATCGCTTCCGGGCTGGTGCTCTGGTCGGTGAAGCGGCGCGCGCAGGCGCAGCGC AAGCCGGGCGATGCCGGCCTGCCCTTCGGCGAGCGGCTGGTGGCCAGCCTGAACGTGGGCCTGATGGGGGGGCTGCCCCT GGCGGTCGCCGCGTTCCTGGCGGCCAACCGGCTGCTGCCCCTGTCCACGACCGGGCGCGCCGACGCGGAACTCGCGTGGT TCTTCGGCACCTGGGGCGCGGGCCTGGCCGTCGGCCTGCTGCGGCCCGACCGGCGCGGCTGGGCACTGCTGCTGGGCGCC GCGGGCGCGCTGTTCGCGGCGCTGCCGGTGATCAACGCGGCCACCACCTCGGCGCATCTGGGCACCACGCTGCCCGCGGG CGAATGGGCCTGGGCCGGCATGGACCTGTCGTTCCTGGCCGCCGGGCTGGTGTTCGGCGCCCTGGCCCGCCACCTGCTGC GGCGCCGCGCGGCCGCCGCGCCGAAGGCGGCGCGCGCCGCCGCGCAGCCAAGGGCACCGTCCGGCACCACGCCCGCGCCA GGAGCCTGA
Upstream 100 bases:
>100_bases TCTATGCGCGCACCGCATGGTCGGCCTGGGCCGGGGCGGGCGTGCCCGCGCTGCTGCTGGGCGCCTGCGTGGTCGCTCCG CGCCTGTGGGGAGGCGCGGC
Downstream 100 bases:
>100_bases CCGCCATGCTCGAACTGCTGCTGTGTTTCGCCGGCTGGGCCGGCATCGCGCTGGGCATGGACCGGCACCACGAGGACGCC TGGGGGCGCGAAGGCGCCCC
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; Iron Uptake Protein; Aspartate Kinase; PepSY-Associated TM Helix Family; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Family Protein; Transmembrane Protein; Response Regulator Receiver Protein; PepSY Domain Protein; Iron-Regulated Membrane Protein DUF; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Transmembrane PepSY Domain-Containing Protein
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTAAANDTARAAAAPGREGFRQAMSWVHTWAGLVLGWLLFAIFATGTLSFFKSEFNLWMRPEMHGLAAPSPDVADRAQAA LHRHAPGVTQWFMRLPDERLPAVTVLWRDSANGRFQTLLMDPATGESIGTRETMGGEFFYRFHFELRTAHQSRWALQGRW IVGVATLLMFIALLTGVVTHRRIFKDFFTFRPTKGGQRAWLDAHNVSGVLALPFYLVITFSGLMIFHTLYMPAGIAAAYA TPEGTDSQAYFAEMQGDEPGARSARRVRGTAEAAAPLPALDLATMVAGAHRTWGDARIGNISARRDADGTVVEVTRHDGD RLQYGPARLRFDGATARQLALIDPQTPAIKTYRVLYGLHLARFAGPGMRWALFGFGVLGSLMIASGLVLWSVKRRAQAQR KPGDAGLPFGERLVASLNVGLMGGLPLAVAAFLAANRLLPLSTTGRADAELAWFFGTWGAGLAVGLLRPDRRGWALLLGA AGALFAALPVINAATTSAHLGTTLPAGEWAWAGMDLSFLAAGLVFGALARHLLRRRAAAAPKAARAAAQPRAPSGTTPAP GA
Sequences:
>Translated_562_residues MTAAANDTARAAAAPGREGFRQAMSWVHTWAGLVLGWLLFAIFATGTLSFFKSEFNLWMRPEMHGLAAPSPDVADRAQAA LHRHAPGVTQWFMRLPDERLPAVTVLWRDSANGRFQTLLMDPATGESIGTRETMGGEFFYRFHFELRTAHQSRWALQGRW IVGVATLLMFIALLTGVVTHRRIFKDFFTFRPTKGGQRAWLDAHNVSGVLALPFYLVITFSGLMIFHTLYMPAGIAAAYA TPEGTDSQAYFAEMQGDEPGARSARRVRGTAEAAAPLPALDLATMVAGAHRTWGDARIGNISARRDADGTVVEVTRHDGD RLQYGPARLRFDGATARQLALIDPQTPAIKTYRVLYGLHLARFAGPGMRWALFGFGVLGSLMIASGLVLWSVKRRAQAQR KPGDAGLPFGERLVASLNVGLMGGLPLAVAAFLAANRLLPLSTTGRADAELAWFFGTWGAGLAVGLLRPDRRGWALLLGA AGALFAALPVINAATTSAHLGTTLPAGEWAWAGMDLSFLAAGLVFGALARHLLRRRAAAAPKAARAAAQPRAPSGTTPAP GA >Mature_561_residues TAAANDTARAAAAPGREGFRQAMSWVHTWAGLVLGWLLFAIFATGTLSFFKSEFNLWMRPEMHGLAAPSPDVADRAQAAL HRHAPGVTQWFMRLPDERLPAVTVLWRDSANGRFQTLLMDPATGESIGTRETMGGEFFYRFHFELRTAHQSRWALQGRWI VGVATLLMFIALLTGVVTHRRIFKDFFTFRPTKGGQRAWLDAHNVSGVLALPFYLVITFSGLMIFHTLYMPAGIAAAYAT PEGTDSQAYFAEMQGDEPGARSARRVRGTAEAAAPLPALDLATMVAGAHRTWGDARIGNISARRDADGTVVEVTRHDGDR LQYGPARLRFDGATARQLALIDPQTPAIKTYRVLYGLHLARFAGPGMRWALFGFGVLGSLMIASGLVLWSVKRRAQAQRK PGDAGLPFGERLVASLNVGLMGGLPLAVAAFLAANRLLPLSTTGRADAELAWFFGTWGAGLAVGLLRPDRRGWALLLGAA GALFAALPVINAATTSAHLGTTLPAGEWAWAGMDLSFLAAGLVFGALARHLLRRRAAAAPKAARAAAQPRAPSGTTPAPG A
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60367; Mature: 60236
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAANDTARAAAAPGREGFRQAMSWVHTWAGLVLGWLLFAIFATGTLSFFKSEFNLWMR CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC PEMHGLAAPSPDVADRAQAALHRHAPGVTQWFMRLPDERLPAVTVLWRDSANGRFQTLLM CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE DPATGESIGTRETMGGEFFYRFHFELRTAHQSRWALQGRWIVGVATLLMFIALLTGVVTH CCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RRIFKDFFTFRPTKGGQRAWLDAHNVSGVLALPFYLVITFSGLMIFHTLYMPAGIAAAYA HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEC TPEGTDSQAYFAEMQGDEPGARSARRVRGTAEAAAPLPALDLATMVAGAHRTWGDARIGN CCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC ISARRDADGTVVEVTRHDGDRLQYGPARLRFDGATARQLALIDPQTPAIKTYRVLYGLHL CCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH ARFAGPGMRWALFGFGVLGSLMIASGLVLWSVKRRAQAQRKPGDAGLPFGERLVASLNVG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC LMGGLPLAVAAFLAANRLLPLSTTGRADAELAWFFGTWGAGLAVGLLRPDRRGWALLLGA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHEEECCCCCCCCCEEEEHH AGALFAALPVINAATTSAHLGTTLPAGEWAWAGMDLSFLAAGLVFGALARHLLRRRAAAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC PKAARAAAQPRAPSGTTPAPGA CHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TAAANDTARAAAAPGREGFRQAMSWVHTWAGLVLGWLLFAIFATGTLSFFKSEFNLWMR CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC PEMHGLAAPSPDVADRAQAALHRHAPGVTQWFMRLPDERLPAVTVLWRDSANGRFQTLLM CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE DPATGESIGTRETMGGEFFYRFHFELRTAHQSRWALQGRWIVGVATLLMFIALLTGVVTH CCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RRIFKDFFTFRPTKGGQRAWLDAHNVSGVLALPFYLVITFSGLMIFHTLYMPAGIAAAYA HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEC TPEGTDSQAYFAEMQGDEPGARSARRVRGTAEAAAPLPALDLATMVAGAHRTWGDARIGN CCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC ISARRDADGTVVEVTRHDGDRLQYGPARLRFDGATARQLALIDPQTPAIKTYRVLYGLHL CCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH ARFAGPGMRWALFGFGVLGSLMIASGLVLWSVKRRAQAQRKPGDAGLPFGERLVASLNVG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC LMGGLPLAVAAFLAANRLLPLSTTGRADAELAWFFGTWGAGLAVGLLRPDRRGWALLLGA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHEEECCCCCCCCCEEEEHH AGALFAALPVINAATTSAHLGTTLPAGEWAWAGMDLSFLAAGLVFGALARHLLRRRAAAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC PKAARAAAQPRAPSGTTPAPGA CHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA