Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610007
Identifier: 120610007
GI number: 120610007
Start: 1447589
End: 1448101
Strand: Reverse
Name: 120610007
Synonym: Aave_1320
Alternate gene names: NA
Gene position: 1448101-1447589 (Counterclockwise)
Preceding gene: 120610008
Following gene: 120610004
Centisome position: 27.05
GC content: 74.85
Gene sequence:
>513_bases ATGCCCGCATCTGCCCCCACGCCTGCGCCTGCGGCATCGCCCGCCGCGCGCATCGCCGTGCTGGGCGCGCCGGGCGCGGG CGCCGCGGCGCTGGTGACCGCAGTGCGGGAGCATGCGGCCTGGCCGGCCGCGCGCGCGCGCCTCGTGCTGGTGGAGCCGG ATCCCGGCGACGCCCCAGGGGCCTTGCGGACACTGCGCGAGAGCGGCTGCACGCAGGCCTGGCTGATGGGGCTGGATATG CTGCCTCCCGGCGAAGCCCTTCGCCAGGAAGGCCATGACGCGGCCCTGCGGAGCCTGCTGCAGGCCCTGGGCTGGGGCCA CCACGTGTTCTACGGCAATGCCGATGCGCGGTTGCGGCACGCGCTCATGTTGGCAGGCGCTGCCACGCCGGAACGCCTCC AGTCTCCGGGCGCCGCACGGCCCGCGCTCGCATGGTCGTGCGAGAAATGCAGCGACCCGGAATGCGAGCACCGGCTGTTC CAGCGGCTGCTCACCCCGACGGCTGCGGACTGA
Upstream 100 bases:
>100_bases GAGATCTACGTGCACGTGGCGCCTCGCTGAACGCCGCCCGCCGACCCCATCTGCCCGCCCGGCCTGCGGCCTGGCCCTTC CGTCCCGTCCCGCCATCGAC
Downstream 100 bases:
>100_bases GCGGCCCCCGCTGCGCCCTTACTGAACCGCCTTCGTCCCCGGGGCCAGTTCCGCTGCGCTGGTGAAGATCTGTGCGGCGT CCACCGCGTCGAAGCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPASAPTPAPAASPAARIAVLGAPGAGAAALVTAVREHAAWPAARARLVLVEPDPGDAPGALRTLRESGCTQAWLMGLDM LPPGEALRQEGHDAALRSLLQALGWGHHVFYGNADARLRHALMLAGAATPERLQSPGAARPALAWSCEKCSDPECEHRLF QRLLTPTAAD
Sequences:
>Translated_170_residues MPASAPTPAPAASPAARIAVLGAPGAGAAALVTAVREHAAWPAARARLVLVEPDPGDAPGALRTLRESGCTQAWLMGLDM LPPGEALRQEGHDAALRSLLQALGWGHHVFYGNADARLRHALMLAGAATPERLQSPGAARPALAWSCEKCSDPECEHRLF QRLLTPTAAD >Mature_169_residues PASAPTPAPAASPAARIAVLGAPGAGAAALVTAVREHAAWPAARARLVLVEPDPGDAPGALRTLRESGCTQAWLMGLDML PPGEALRQEGHDAALRSLLQALGWGHHVFYGNADARLRHALMLAGAATPERLQSPGAARPALAWSCEKCSDPECEHRLFQ RLLTPTAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17683; Mature: 17552
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASAPTPAPAASPAARIAVLGAPGAGAAALVTAVREHAAWPAARARLVLVEPDPGDAPG CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCH ALRTLRESGCTQAWLMGLDMLPPGEALRQEGHDAALRSLLQALGWGHHVFYGNADARLRH HHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHHHH ALMLAGAATPERLQSPGAARPALAWSCEKCSDPECEHRLFQRLLTPTAAD HHHHHCCCCHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure PASAPTPAPAASPAARIAVLGAPGAGAAALVTAVREHAAWPAARARLVLVEPDPGDAPG CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCH ALRTLRESGCTQAWLMGLDMLPPGEALRQEGHDAALRSLLQALGWGHHVFYGNADARLRH HHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHHHH ALMLAGAATPERLQSPGAARPALAWSCEKCSDPECEHRLFQRLLTPTAAD HHHHHCCCCHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA