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The map label for this gene is yrdA [C]

Identifier: 120610005

GI number: 120610005

Start: 1446004

End: 1446528

Strand: Direct

Name: yrdA [C]

Synonym: Aave_1318

Alternate gene names: 120610005

Gene position: 1446004-1446528 (Clockwise)

Preceding gene: 120610001

Following gene: 120610006

Centisome position: 27.01

GC content: 68.0

Gene sequence:

>525_bases
ATGGCGCTCTACGAACTCGACGGCATTTCTCCCCGCGTGGCCGATTCGGCCTGGGTGGCGGGCAGCGCGGAGGTGATGGG
CAACGTGGTGCTCGGCGAGGACGCCAGCATCTGGTTCGGCGCGGTGCTGCGCGGCGACAACGAGACGCTCACCATCGGCG
CGGGCAGCAACGTGCAGGATGGCAGCGTGCTCCATTCCGACTTCGGCCAGCCGCTGACGCTGGGCGAACGCGTGACGGTG
GGCCACAAGGTCGTGCTGCATGGCTGCACCGTGGGCGACGAGTCGCTCATCGGCATCGGGGCCGTGGTGCTCAATGGTGC
GAAGATCGGCCGCAACTGCCTCGTCGGCGCGGGCGCGCTGGTCACGGAAGGCAAGGAATTCCCGGACGGCTCGATGATAT
TGGGCAGCCCGGCCAAGGCCGTGAGGCAGCTCACGCCGGAACAGATCGAAGGCCTGCGCAAGAGCGCACAGGTCTATATC
GCGAATGCCCGGCGTTTCCGGGCGGGCCTGCACCGCACGGGTTGA

Upstream 100 bases:

>100_bases
TGCAGGGCACGGTGTCGAAGCTCCATACCTACAATTCTAGGTTCCCGCCCCCACATGGAAGACCTGGGGCGGCGCATGAC
GATGCACAGGAGACGAAACG

Downstream 100 bases:

>100_bases
ACCCCGGCGTCCACGGCCCATTTGACAGCAGATGCAGAAAGACTCCAGGGTGTCAGAACTCCACAAGTTCCTCTTCGATG
GCCTGCCGGTGCGCGGCATG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MALYELDGISPRVADSAWVAGSAEVMGNVVLGEDASIWFGAVLRGDNETLTIGAGSNVQDGSVLHSDFGQPLTLGERVTV
GHKVVLHGCTVGDESLIGIGAVVLNGAKIGRNCLVGAGALVTEGKEFPDGSMILGSPAKAVRQLTPEQIEGLRKSAQVYI
ANARRFRAGLHRTG

Sequences:

>Translated_174_residues
MALYELDGISPRVADSAWVAGSAEVMGNVVLGEDASIWFGAVLRGDNETLTIGAGSNVQDGSVLHSDFGQPLTLGERVTV
GHKVVLHGCTVGDESLIGIGAVVLNGAKIGRNCLVGAGALVTEGKEFPDGSMILGSPAKAVRQLTPEQIEGLRKSAQVYI
ANARRFRAGLHRTG
>Mature_173_residues
ALYELDGISPRVADSAWVAGSAEVMGNVVLGEDASIWFGAVLRGDNETLTIGAGSNVQDGSVLHSDFGQPLTLGERVTVG
HKVVLHGCTVGDESLIGIGAVVLNGAKIGRNCLVGAGALVTEGKEFPDGSMILGSPAKAVRQLTPEQIEGLRKSAQVYIA
NARRFRAGLHRTG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=157, Percent_Identity=44.5859872611465, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1787667, Length=173, Percent_Identity=35.8381502890173, Blast_Score=126, Evalue=9e-31,
Organism=Escherichia coli, GI87081681, Length=173, Percent_Identity=33.5260115606936, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18035; Mature: 17904

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYELDGISPRVADSAWVAGSAEVMGNVVLGEDASIWFGAVLRGDNETLTIGAGSNVQD
CEEEECCCCCCCCCCCEECCCCHHHHEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCC
GSVLHSDFGQPLTLGERVTVGHKVVLHGCTVGDESLIGIGAVVLNGAKIGRNCLVGAGAL
CCEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEEEECCCHHCCEEEEECCCE
VTEGKEFPDGSMILGSPAKAVRQLTPEQIEGLRKSAQVYIANARRFRAGLHRTG
EECCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHCCEEEEECHHHHHHHCCCCC
>Mature Secondary Structure 
ALYELDGISPRVADSAWVAGSAEVMGNVVLGEDASIWFGAVLRGDNETLTIGAGSNVQD
EEEECCCCCCCCCCCEECCCCHHHHEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCC
GSVLHSDFGQPLTLGERVTVGHKVVLHGCTVGDESLIGIGAVVLNGAKIGRNCLVGAGAL
CCEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEEEECCCHHCCEEEEECCCE
VTEGKEFPDGSMILGSPAKAVRQLTPEQIEGLRKSAQVYIANARRFRAGLHRTG
EECCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHCCEEEEECHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]