Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609995
Identifier: 120609995
GI number: 120609995
Start: 1435147
End: 1436100
Strand: Reverse
Name: 120609995
Synonym: Aave_1308
Alternate gene names: NA
Gene position: 1436100-1435147 (Counterclockwise)
Preceding gene: 120609996
Following gene: 120609993
Centisome position: 26.83
GC content: 69.29
Gene sequence:
>954_bases ATGCCACGGCACCCGCCGGCGCGGGCGCCGGGTATCCTGCGGGCGGTGAACTACGCGCAGCTCCTCTTCCCGGATTTCTC CCTCATCCTCTTTGGATACCTGATCTGCCGTTACACGGCCCTCGACCGGTCGGTCTGGCAGCCCGTCGAAGGCCTGGTGT ATTACCTGCTCTTCCCGGTGCTGCTCTTCCAGTCGATCGTGAGGACCCCGATCCACCTGGGCGAAACCTCGGGCCTGATC GGCGCGGGCGTGCTCATGGGGCTCTGCGGCATCGGTCTGGCCTATGCGCTGCCGAAGATCCCCGGACTGTCGGGCCGCAT CGATGCGCGCGACCATGCCGCCAGCGCGCAGGTGGCGTTCCGCTTCAACTCGTTCATCGGTCTGGCGCTGGCCGAGCGGC TGGCGGGCGCGCAGGGCCTGCAACTGATCGCCGTGCTCATCGGGGTCTGCGTGCCGATCTTCAACGTGGCGGCCGTGTGG CCCATGGCGCGCGCGGGCAGCCAGGGCTTCCTGAAGGAACTGGTGCGCAATCCGCTGATCCTGGCGACCGCTTCCGGGCT GGCGGCGAACCTGCTCGGCCTGCGCATCCCCGGATGGATGGAGCCTTCGGTGAACCGCGTCGGGGCCGCGTCGATCGCGC TGGGGCTCATGTCGGCAGGCGCAGGCATGCAGCTCGGACTGCTCACGCGCAGCACGCTGCTGTCGGCCTCGGTGCTCTCG ATACGGCACCTCGTGCAGCCGGTGGCGGCGTGCCTGCTGGCACGCTGGTTCCGCCTCGACGGCGTGCAGACGACCGTACT GATGGCCTTCTCGGCGCTGCCCACCGCGTCCACCTGCTACGTACTGGCCGCGCGCATGGGCTACAACGGGCCCTATGTGG CGGGCCTGGTGACACTGTCCACGGTGCTGGGCGTGTTCAGCCTGCCGCTGGCGCTGGGCTGGCTCGCTCCCTGA
Upstream 100 bases:
>100_bases AGAAGGTGCTGGAAGCCATCGCGGACGGCGCCCGCGCCTTCAAGTCCAAGGACTGACGCGCCTGCGCGCCGCCGGGGCTT TCCCGGAGACGGGGCGTTCC
Downstream 100 bases:
>100_bases ACGCTGCGCGCCGTCCGCTCATGCGGGCGGCGGCTCCGCCCCGGCGGCCGCCTGCGCCAGGGCCCAGGCCACGTGCTCGC GCACCAGGGGGCTCGGGTCG
Product: auxin efflux carrier
Products: NA
Alternate protein names: Permease; Auxin Efflux Carrier Family Protein; Transporter AEC Family; Malonate Transporter; Transporter Auxin Efflux Carrier Family; Membrane Transporter; Efflux Protein; Transmembrane Protein; Auxin Efflux Carrier Protein; Membrane Transport Family; Permease Transmembrane Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MPRHPPARAPGILRAVNYAQLLFPDFSLILFGYLICRYTALDRSVWQPVEGLVYYLLFPVLLFQSIVRTPIHLGETSGLI GAGVLMGLCGIGLAYALPKIPGLSGRIDARDHAASAQVAFRFNSFIGLALAERLAGAQGLQLIAVLIGVCVPIFNVAAVW PMARAGSQGFLKELVRNPLILATASGLAANLLGLRIPGWMEPSVNRVGAASIALGLMSAGAGMQLGLLTRSTLLSASVLS IRHLVQPVAACLLARWFRLDGVQTTVLMAFSALPTASTCYVLAARMGYNGPYVAGLVTLSTVLGVFSLPLALGWLAP
Sequences:
>Translated_317_residues MPRHPPARAPGILRAVNYAQLLFPDFSLILFGYLICRYTALDRSVWQPVEGLVYYLLFPVLLFQSIVRTPIHLGETSGLI GAGVLMGLCGIGLAYALPKIPGLSGRIDARDHAASAQVAFRFNSFIGLALAERLAGAQGLQLIAVLIGVCVPIFNVAAVW PMARAGSQGFLKELVRNPLILATASGLAANLLGLRIPGWMEPSVNRVGAASIALGLMSAGAGMQLGLLTRSTLLSASVLS IRHLVQPVAACLLARWFRLDGVQTTVLMAFSALPTASTCYVLAARMGYNGPYVAGLVTLSTVLGVFSLPLALGWLAP >Mature_316_residues PRHPPARAPGILRAVNYAQLLFPDFSLILFGYLICRYTALDRSVWQPVEGLVYYLLFPVLLFQSIVRTPIHLGETSGLIG AGVLMGLCGIGLAYALPKIPGLSGRIDARDHAASAQVAFRFNSFIGLALAERLAGAQGLQLIAVLIGVCVPIFNVAAVWP MARAGSQGFLKELVRNPLILATASGLAANLLGLRIPGWMEPSVNRVGAASIALGLMSAGAGMQLGLLTRSTLLSASVLSI RHLVQPVAACLLARWFRLDGVQTTVLMAFSALPTASTCYVLAARMGYNGPYVAGLVTLSTVLGVFSLPLALGWLAP
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33474; Mature: 33343
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHPPARAPGILRAVNYAQLLFPDFSLILFGYLICRYTALDRSVWQPVEGLVYYLLFPV CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQSIVRTPIHLGETSGLIGAGVLMGLCGIGLAYALPKIPGLSGRIDARDHAASAQVAF HHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH RFNSFIGLALAERLAGAQGLQLIAVLIGVCVPIFNVAAVWPMARAGSQGFLKELVRNPLI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE LATASGLAANLLGLRIPGWMEPSVNRVGAASIALGLMSAGAGMQLGLLTRSTLLSASVLS EEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH IRHLVQPVAACLLARWFRLDGVQTTVLMAFSALPTASTCYVLAARMGYNGPYVAGLVTLS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH TVLGVFSLPLALGWLAP HHHHHHHHHHHHHCCCC >Mature Secondary Structure PRHPPARAPGILRAVNYAQLLFPDFSLILFGYLICRYTALDRSVWQPVEGLVYYLLFPV CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQSIVRTPIHLGETSGLIGAGVLMGLCGIGLAYALPKIPGLSGRIDARDHAASAQVAF HHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH RFNSFIGLALAERLAGAQGLQLIAVLIGVCVPIFNVAAVWPMARAGSQGFLKELVRNPLI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE LATASGLAANLLGLRIPGWMEPSVNRVGAASIALGLMSAGAGMQLGLLTRSTLLSASVLS EEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH IRHLVQPVAACLLARWFRLDGVQTTVLMAFSALPTASTCYVLAARMGYNGPYVAGLVTLS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH TVLGVFSLPLALGWLAP HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA