Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is miaA

Identifier: 120609981

GI number: 120609981

Start: 1421317

End: 1422369

Strand: Reverse

Name: miaA

Synonym: Aave_1294

Alternate gene names: 120609981

Gene position: 1422369-1421317 (Counterclockwise)

Preceding gene: 120609982

Following gene: 120609980

Centisome position: 26.57

GC content: 74.36

Gene sequence:

>1053_bases
ATGTCCACTCCCCCTTCCCTGCCGGCCACCGGTGTGCCGGCACCCCACCTGCCCCGCGGAGCGGCCGCTCCGGCGCTTCC
TGCCTGCCTCGCGCTGGCAGGCCCCACCGCATCGGGCAAGACGGCCGGGGCGCTGGCCCTGGCCCGCGCGCTCGCGCCGC
ACCGGCCCGTGGAAATCGTGAGCGTGGATTCGGCGCTGGTGTACCGCGGCATGGACATCGGCACGGCCAAGCCGACGGCC
GCCGAGCAGGCGGCCGTGCCACACCACCTGATCGACATCCGCGATCCGCTGCAGCCCTACAGCGCGGCCGAATTCGTGGC
CGACGCGCAGCGGCTCGTGCGCGAAATCCAGGCGCGTGGCGCCCTGCCGCTGCTGGTGGGGGGGACGATGCTGTACTTCA
AGGCGCTGTGGGACGGTATCGACGACATGCCGCCGGCCGACGCCGCCGTGCGGGCCCGACTGGAAGCACAGGCCGCGGCC
GAAGGCTGGCCGGCCCTGCACGCGGAACTGGCCCGCGTGGATCCGCAGACGGCGGCCCGGCTCGCGCCCGGTGACAGCCA
GCGCATCCAGCGGGCGCTGGAGGTCTGGCACGTGTCCGGGCGACCGCTGTCGAGTTTCCACACCCGCTCCCGCGCGGCGG
GCGAAGCGGCAGGCGCGGCACGCATGTCCATGCCGCTCTTCTCCCTCGAGCCGCAGGACCGCGCCTGGCTGCACGGTCGG
ATCGCACAGCGCTTCGACGCCATGCTGGACGAGGGCTTCGTGGAGGAGGTCCGGCGGCTGCGCGCCCGCGGCGACCTGCA
CCCGGACCTGCCCTCCATGCGGTGCGTCGGCTACCGGCAGGCCTGGGAGGCGCTGTACGAAGAAGCGCGCACCGGCCGGC
TGCCGCTGGCGCAGTTGCGCGAACGCGGCATCGCGGCCACCCGGCAGCTCGCCAAGCGGCAGGTCACCTGGCTGCGCAGC
ATGCCCTGGCGCCATGCGATCGCCTGCGACGCACCGGATGCCACGCAGCGGTGGGTGGCGGCCGCGCTGCATGCGCTCGG
AGTTCCGGCATGA

Upstream 100 bases:

>100_bases
GCCCTGGCAGGGCCAGGCGGACGAAGCCGTCCGCGCCGCCATGCCGGGCTGACCTGCCGGCCGCGGGCAGGCACCGGGCG
CTGGTACGCTCCGGGGGATC

Downstream 100 bases:

>100_bases
CACCGGACGCGCATGCCGTCCCGCCTGCCGCGGCGCCACTGCTGCAGGTCCGAGGCCTGGCCCGGCACTACGGCACGGAC
ACGCCGGTCTTCCGCGATGT

Product: tRNA delta(2)-isopentenylpyrophosphate transferase

Products: NA

Alternate protein names: Dimethylallyl diphosphate:tRNA dimethylallyltransferase; DMAPP:tRNA dimethylallyltransferase; DMATase; Isopentenyl-diphosphate:tRNA isopentenyltransferase; IPP transferase; IPPT; IPTase

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSTPPSLPATGVPAPHLPRGAAAPALPACLALAGPTASGKTAGALALARALAPHRPVEIVSVDSALVYRGMDIGTAKPTA
AEQAAVPHHLIDIRDPLQPYSAAEFVADAQRLVREIQARGALPLLVGGTMLYFKALWDGIDDMPPADAAVRARLEAQAAA
EGWPALHAELARVDPQTAARLAPGDSQRIQRALEVWHVSGRPLSSFHTRSRAAGEAAGAARMSMPLFSLEPQDRAWLHGR
IAQRFDAMLDEGFVEEVRRLRARGDLHPDLPSMRCVGYRQAWEALYEEARTGRLPLAQLRERGIAATRQLAKRQVTWLRS
MPWRHAIACDAPDATQRWVAAALHALGVPA

Sequences:

>Translated_350_residues
MSTPPSLPATGVPAPHLPRGAAAPALPACLALAGPTASGKTAGALALARALAPHRPVEIVSVDSALVYRGMDIGTAKPTA
AEQAAVPHHLIDIRDPLQPYSAAEFVADAQRLVREIQARGALPLLVGGTMLYFKALWDGIDDMPPADAAVRARLEAQAAA
EGWPALHAELARVDPQTAARLAPGDSQRIQRALEVWHVSGRPLSSFHTRSRAAGEAAGAARMSMPLFSLEPQDRAWLHGR
IAQRFDAMLDEGFVEEVRRLRARGDLHPDLPSMRCVGYRQAWEALYEEARTGRLPLAQLRERGIAATRQLAKRQVTWLRS
MPWRHAIACDAPDATQRWVAAALHALGVPA
>Mature_349_residues
STPPSLPATGVPAPHLPRGAAAPALPACLALAGPTASGKTAGALALARALAPHRPVEIVSVDSALVYRGMDIGTAKPTAA
EQAAVPHHLIDIRDPLQPYSAAEFVADAQRLVREIQARGALPLLVGGTMLYFKALWDGIDDMPPADAAVRARLEAQAAAE
GWPALHAELARVDPQTAARLAPGDSQRIQRALEVWHVSGRPLSSFHTRSRAAGEAAGAARMSMPLFSLEPQDRAWLHGRI
AQRFDAMLDEGFVEEVRRLRARGDLHPDLPSMRCVGYRQAWEALYEEARTGRLPLAQLRERGIAATRQLAKRQVTWLRSM
PWRHAIACDAPDATQRWVAAALHALGVPA

Specific function: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)

COG id: COG0324

COG function: function code J; tRNA delta(2)-isopentenylpyrophosphate transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP transferase family

Homologues:

Organism=Homo sapiens, GI31581534, Length=326, Percent_Identity=30.9815950920245, Blast_Score=137, Evalue=1e-32,
Organism=Escherichia coli, GI1790613, Length=322, Percent_Identity=50.9316770186335, Blast_Score=296, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI25144712, Length=269, Percent_Identity=24.5353159851301, Blast_Score=90, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324848, Length=306, Percent_Identity=24.8366013071895, Blast_Score=120, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24649830, Length=338, Percent_Identity=28.1065088757396, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MIAA_ACIAC (A1TLP7)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_969659.1
- ProteinModelPortal:   A1TLP7
- SMR:   A1TLP7
- STRING:   A1TLP7
- GeneID:   4669640
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_1294
- NMPDR:   fig|397945.5.peg.1137
- eggNOG:   COG0324
- HOGENOM:   HBG559459
- OMA:   VNADSMQ
- PhylomeDB:   A1TLP7
- ProtClustDB:   CLSK963016
- BioCyc:   AAVE397945:AAVE_1294-MONOMER
- HAMAP:   MF_00185
- InterPro:   IPR002627
- InterPro:   IPR018022
- PANTHER:   PTHR11088
- TIGRFAMs:   TIGR00174

Pfam domain/function: PF01715 IPPT

EC number: =2.5.1.75

Molecular weight: Translated: 37667; Mature: 37535

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPPSLPATGVPAPHLPRGAAAPALPACLALAGPTASGKTAGALALARALAPHRPVEIV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEE
SVDSALVYRGMDIGTAKPTAAEQAAVPHHLIDIRDPLQPYSAAEFVADAQRLVREIQARG
EECHHHHHCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ALPLLVGGTMLYFKALWDGIDDMPPADAAVRARLEAQAAAEGWPALHAELARVDPQTAAR
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
LAPGDSQRIQRALEVWHVSGRPLSSFHTRSRAAGEAAGAARMSMPLFSLEPQDRAWLHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHH
IAQRFDAMLDEGFVEEVRRLRARGDLHPDLPSMRCVGYRQAWEALYEEARTGRLPLAQLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERGIAATRQLAKRQVTWLRSMPWRHAIACDAPDATQRWVAAALHALGVPA
HCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STPPSLPATGVPAPHLPRGAAAPALPACLALAGPTASGKTAGALALARALAPHRPVEIV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEE
SVDSALVYRGMDIGTAKPTAAEQAAVPHHLIDIRDPLQPYSAAEFVADAQRLVREIQARG
EECHHHHHCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ALPLLVGGTMLYFKALWDGIDDMPPADAAVRARLEAQAAAEGWPALHAELARVDPQTAAR
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
LAPGDSQRIQRALEVWHVSGRPLSSFHTRSRAAGEAAGAARMSMPLFSLEPQDRAWLHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHH
IAQRFDAMLDEGFVEEVRRLRARGDLHPDLPSMRCVGYRQAWEALYEEARTGRLPLAQLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERGIAATRQLAKRQVTWLRSMPWRHAIACDAPDATQRWVAAALHALGVPA
HCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA