Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609937
Identifier: 120609937
GI number: 120609937
Start: 1373479
End: 1373850
Strand: Direct
Name: 120609937
Synonym: Aave_1250
Alternate gene names: NA
Gene position: 1373479-1373850 (Clockwise)
Preceding gene: 120609936
Following gene: 120609938
Centisome position: 25.66
GC content: 71.77
Gene sequence:
>372_bases GTGTGGAAAGGATGTGCCTTGAATGATTTCCTGGCCGGCGTGATCCGGTGGATCGTGCGCCTCGCGGTCGTGGCCGTGGG AGCGGTGTTTTTCCTGAGCCTGCTGATCGCCGTGGCGCTGCTCGCGGTGGTGTGGGGCGTGCGTTCCCTCTGGGCGCGGC TCACGGGCCAGCCCGCCACGCCGTGGACGATGCGCATGGATCCGCGCGAAGGCTGGAGTACGGTGTACCGGAGCACCGCG CGCTGGTCGGCCGCGGGCCGGCGAAGCCAGCCCGCCGATGGGGAACCGGGTTCGCTGCGCTCGGCCGAACTGCCCGGCGC GCGCGCGGACGTCGTGGACGTGCAGCCGCGCGACCTGCCCGGCAAGGTGTGA
Upstream 100 bases:
>100_bases TATCCGCCCAAGAGCGTGATCCCGGTGAACGTGGATCCCGTACAGGACCCTGGGGTCTTCCATTTCGGCGAAGCGGCCGC GGTGGGGTAAGTTCGATGTT
Downstream 100 bases:
>100_bases CGTGACCGGCCGGCGCCGCCGCGGCAGGCCGGCGCCCGCCCGCACGGGCTTACCCTGGCTTTTGGAGACGCCCGTTTACA TGGCGTTGCGAGGGCCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MWKGCALNDFLAGVIRWIVRLAVVAVGAVFFLSLLIAVALLAVVWGVRSLWARLTGQPATPWTMRMDPREGWSTVYRSTA RWSAAGRRSQPADGEPGSLRSAELPGARADVVDVQPRDLPGKV
Sequences:
>Translated_123_residues MWKGCALNDFLAGVIRWIVRLAVVAVGAVFFLSLLIAVALLAVVWGVRSLWARLTGQPATPWTMRMDPREGWSTVYRSTA RWSAAGRRSQPADGEPGSLRSAELPGARADVVDVQPRDLPGKV >Mature_123_residues MWKGCALNDFLAGVIRWIVRLAVVAVGAVFFLSLLIAVALLAVVWGVRSLWARLTGQPATPWTMRMDPREGWSTVYRSTA RWSAAGRRSQPADGEPGSLRSAELPGARADVVDVQPRDLPGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13399; Mature: 13399
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKGCALNDFLAGVIRWIVRLAVVAVGAVFFLSLLIAVALLAVVWGVRSLWARLTGQPAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PWTMRMDPREGWSTVYRSTARWSAAGRRSQPADGEPGSLRSAELPGARADVVDVQPRDLP CEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC GKV CCC >Mature Secondary Structure MWKGCALNDFLAGVIRWIVRLAVVAVGAVFFLSLLIAVALLAVVWGVRSLWARLTGQPAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PWTMRMDPREGWSTVYRSTARWSAAGRRSQPADGEPGSLRSAELPGARADVVDVQPRDLP CEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC GKV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA