Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609934
Identifier: 120609934
GI number: 120609934
Start: 1369917
End: 1370153
Strand: Direct
Name: 120609934
Synonym: Aave_1247
Alternate gene names: NA
Gene position: 1369917-1370153 (Clockwise)
Preceding gene: 120609929
Following gene: 120609935
Centisome position: 25.59
GC content: 73.0
Gene sequence:
>237_bases ATGGCACGCCAGGACAAGAACGCATGGGCCGCGAAGGTGTTCGCCCTGATCCGGGGCGGGCAGACGCAGGCCGCCATGGC GCAGATAAAGGTCGCGCCCTCGGCGGGCGACGTCGCGCGGCTGCAGGCGCTGCTGGCGGGCGTTCCGTCCGATACCGCGG TGCGCCGCCAGCTCGATGCTTTCATCGAGGAAGAGCGCGCGCTGCTCGCCGCGCCCCGCCTGCACCGGGCGCCGTGA
Upstream 100 bases:
>100_bases CGTGGCCATGGGCGGCCACTGTAGCAAACCGGTCGCGCGGCGGCCGTTCCCGTGGACAATCCGGCCTGGACATCACGCAC ACGAGCACGAGGAAGACCGC
Downstream 100 bases:
>100_bases CCGCCATGGCCGATCCGTTGTCTTCCATTCCTCCGGCCCGCGCGGAAGGCCGCGCCCGGGTTTCCATCCAGCCGCAGGAC TTCGATGTCTCGGCCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MARQDKNAWAAKVFALIRGGQTQAAMAQIKVAPSAGDVARLQALLAGVPSDTAVRRQLDAFIEEERALLAAPRLHRAP
Sequences:
>Translated_78_residues MARQDKNAWAAKVFALIRGGQTQAAMAQIKVAPSAGDVARLQALLAGVPSDTAVRRQLDAFIEEERALLAAPRLHRAP >Mature_77_residues ARQDKNAWAAKVFALIRGGQTQAAMAQIKVAPSAGDVARLQALLAGVPSDTAVRRQLDAFIEEERALLAAPRLHRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8347; Mature: 8216
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQDKNAWAAKVFALIRGGQTQAAMAQIKVAPSAGDVARLQALLAGVPSDTAVRRQLDA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH FIEEERALLAAPRLHRAP HHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARQDKNAWAAKVFALIRGGQTQAAMAQIKVAPSAGDVARLQALLAGVPSDTAVRRQLDA CCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH FIEEERALLAAPRLHRAP HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA