Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609932
Identifier: 120609932
GI number: 120609932
Start: 1369212
End: 1369541
Strand: Reverse
Name: 120609932
Synonym: Aave_1245
Alternate gene names: NA
Gene position: 1369541-1369212 (Counterclockwise)
Preceding gene: 120609933
Following gene: 120609931
Centisome position: 25.59
GC content: 69.39
Gene sequence:
>330_bases ATGCACGACGACAACCAGATCCACGTCCCGCCCTCCTTCACCGCGCTCTACAGCGACGCGCGCCAGCGCCTGACCGCGCC CTCGGCCGAAATACGCGAACGCTACGAACTGTGCGAGGACCTCGCCAACCACCTCGTGGAGCAGGCGCAGACGCTCTACC ACGTGCAGGCGCCGTCGGAGACGGAGATCCTCGGGCGCATCCACGCCGGCCTGTGCACCCCCGGCGCCGGCGTGTCGCCC ATCGAGGCGCGGTGGATCACGCTGCGCCTGGCGGAACTGCTGAACTGGCATAGCCCCGAACTACCCGAGGTGCCGGCGTC TTCCGGCTAG
Upstream 100 bases:
>100_bases TGGGGCAGCTGGTCACCTTCGAGCAGGCGGACGATGCCCGGCGGTTCGAGCGGCTCTTCACCCCCGACTGACCCACGGCC GGCCCTGCCCCGCGCTGCCC
Downstream 100 bases:
>100_bases CACCACCAGGCGCCGTCCGGGTTTTCGTTCCAGGCAGGCTGTCTTCGCATCCAAAGCACTACCCAGGTCACTGGAAGACG ATCCTCATGGATTTTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MHDDNQIHVPPSFTALYSDARQRLTAPSAEIRERYELCEDLANHLVEQAQTLYHVQAPSETEILGRIHAGLCTPGAGVSP IEARWITLRLAELLNWHSPELPEVPASSG
Sequences:
>Translated_109_residues MHDDNQIHVPPSFTALYSDARQRLTAPSAEIRERYELCEDLANHLVEQAQTLYHVQAPSETEILGRIHAGLCTPGAGVSP IEARWITLRLAELLNWHSPELPEVPASSG >Mature_109_residues MHDDNQIHVPPSFTALYSDARQRLTAPSAEIRERYELCEDLANHLVEQAQTLYHVQAPSETEILGRIHAGLCTPGAGVSP IEARWITLRLAELLNWHSPELPEVPASSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12106; Mature: 12106
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDDNQIHVPPSFTALYSDARQRLTAPSAEIRERYELCEDLANHLVEQAQTLYHVQAPSE CCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TEILGRIHAGLCTPGAGVSPIEARWITLRLAELLNWHSPELPEVPASSG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MHDDNQIHVPPSFTALYSDARQRLTAPSAEIRERYELCEDLANHLVEQAQTLYHVQAPSE CCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TEILGRIHAGLCTPGAGVSPIEARWITLRLAELLNWHSPELPEVPASSG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA