Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120609864

Identifier: 120609864

GI number: 120609864

Start: 1298954

End: 1299331

Strand: Direct

Name: 120609864

Synonym: Aave_1176

Alternate gene names: NA

Gene position: 1298954-1299331 (Clockwise)

Preceding gene: 120609863

Following gene: 120609865

Centisome position: 24.27

GC content: 67.46

Gene sequence:

>378_bases
ATGACCGACGCCCCGGGAGCGGCCATTCCCCTGTGCCCGAGCGATGCGCTGCGGGAGGGCGGCGACGCCGTTCCCTTCGA
TGTCGTGTGGGCCGGGCAGCCCTGCCGTGCCTTCGCCATCCGCTACCAGGGGCAGGTCCATGCCTACCTGAACCAGTGCA
CGCACGTGCCCATGGAGATGGATTGGCAGCCCAACCGCTTCTTCGACGACACGGGGCACTGGCTGCTGTGCGCTTCGCAC
GGCGCTGCCTACCGCCCCGATACCGGCGCCTGTGCCGGCGGCCCCTGCCGTGGCGGACTGGTGAAGATCGCAATTTCGGA
AGAGTCCGGAGTGGTGCGCTGGCATACTGGCTCCCAATTGCAACCCGTGGAATTCTGA

Upstream 100 bases:

>100_bases
TGCGCTGGAGCCGCTGCACGTCGCCCATTCCGTGGCCGATCTGCACGACTGGCTGGTGCGCAACGGCTGATCGCGCCGGC
CCGCTGCTGGAGCACCGAAC

Downstream 100 bases:

>100_bases
GACATCCCATGACCGATCCGACCCGGAAAGAACCCTCCGGCCTGGAAGCTGATCCGTCGTCCACACCTGACCTGTGGGCC
CAGAGTGCTCCTGAAAAAAT

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Ferredoxin; Rieske; Rieske Protein; Rieske Iron-Sulfur Domain Protein; Rieske 2Fe-2S Family Protein; Nitrite Reductase Ferredoxin Subunit; Ferredoxin 2Fe-2S; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASH
GAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF

Sequences:

>Translated_125_residues
MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASH
GAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF
>Mature_124_residues
TDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASHG
AAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13513; Mature: 13382

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEM
CCCCCCCEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCEEC
DWQPNRFFDDTGHWLLCASHGAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQL
CCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCC
QPVEF
CCCCC
>Mature Secondary Structure 
TDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEM
CCCCCCEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCEEC
DWQPNRFFDDTGHWLLCASHGAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQL
CCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCC
QPVEF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA