Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609864
Identifier: 120609864
GI number: 120609864
Start: 1298954
End: 1299331
Strand: Direct
Name: 120609864
Synonym: Aave_1176
Alternate gene names: NA
Gene position: 1298954-1299331 (Clockwise)
Preceding gene: 120609863
Following gene: 120609865
Centisome position: 24.27
GC content: 67.46
Gene sequence:
>378_bases ATGACCGACGCCCCGGGAGCGGCCATTCCCCTGTGCCCGAGCGATGCGCTGCGGGAGGGCGGCGACGCCGTTCCCTTCGA TGTCGTGTGGGCCGGGCAGCCCTGCCGTGCCTTCGCCATCCGCTACCAGGGGCAGGTCCATGCCTACCTGAACCAGTGCA CGCACGTGCCCATGGAGATGGATTGGCAGCCCAACCGCTTCTTCGACGACACGGGGCACTGGCTGCTGTGCGCTTCGCAC GGCGCTGCCTACCGCCCCGATACCGGCGCCTGTGCCGGCGGCCCCTGCCGTGGCGGACTGGTGAAGATCGCAATTTCGGA AGAGTCCGGAGTGGTGCGCTGGCATACTGGCTCCCAATTGCAACCCGTGGAATTCTGA
Upstream 100 bases:
>100_bases TGCGCTGGAGCCGCTGCACGTCGCCCATTCCGTGGCCGATCTGCACGACTGGCTGGTGCGCAACGGCTGATCGCGCCGGC CCGCTGCTGGAGCACCGAAC
Downstream 100 bases:
>100_bases GACATCCCATGACCGATCCGACCCGGAAAGAACCCTCCGGCCTGGAAGCTGATCCGTCGTCCACACCTGACCTGTGGGCC CAGAGTGCTCCTGAAAAAAT
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Ferredoxin; Rieske; Rieske Protein; Rieske Iron-Sulfur Domain Protein; Rieske 2Fe-2S Family Protein; Nitrite Reductase Ferredoxin Subunit; Ferredoxin 2Fe-2S; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASH GAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF
Sequences:
>Translated_125_residues MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASH GAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF >Mature_124_residues TDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEMDWQPNRFFDDTGHWLLCASHG AAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQLQPVEF
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13513; Mature: 13382
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEM CCCCCCCEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCEEC DWQPNRFFDDTGHWLLCASHGAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQL CCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCC QPVEF CCCCC >Mature Secondary Structure TDAPGAAIPLCPSDALREGGDAVPFDVVWAGQPCRAFAIRYQGQVHAYLNQCTHVPMEM CCCCCCEEEECCCHHHHCCCCCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCEEC DWQPNRFFDDTGHWLLCASHGAAYRPDTGACAGGPCRGGLVKIAISEESGVVRWHTGSQL CCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCC QPVEF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA