Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is queF
Identifier: 120609858
GI number: 120609858
Start: 1290772
End: 1291617
Strand: Reverse
Name: queF
Synonym: Aave_1170
Alternate gene names: 120609858
Gene position: 1291617-1290772 (Counterclockwise)
Preceding gene: 120609859
Following gene: 120609855
Centisome position: 24.13
GC content: 67.02
Gene sequence:
>846_bases ATGAATACTCCCGACCAATCCCAGCTGGGCCGCGTCTCCGGCTATGCCGACCAGTACGACGCCTCGCTGCTGTTCCCCCT GCCCCGCCAGCCCAAGCGCCACGAAATCGGCGTGACGGGCACCCCGCCCTTTTTCGGGGCGGACCTGTGGACCGCCTTCG AGCTGTCGTGGCTGAACCTGCGCGGCAAGCCGCAGGTCGCCCTCGCGCACATCACCGTTCCCTGCGAGACCCCCAACATC ATCGAGAGCAAGTCGTTCAAGCTCTACCTGAACAGCTTCAACAACACGCGATTCGCGGATGCCGCACAAGTGCAGACGCG CATCCGGACGGACATCAGCGAGGCCGCGTGGCGCGGTTCGGACCGCCAGGCGACCGTGGGCGTGAAACTGGTGCTGCCCG AGATGTTCGACCGCGAACCCGTGCAGGAGCTCGACGGCCTGCTGCTGGACCGCCTGGACGTGGAGTGCACGCACTACACC CCCGCCCCGGAGCTGCTGCATGCGAACCATGGCGAGGCCCCCGTCACGGAAACGCTCACCAGCCACCTGCTCAAGAGCAA CTGCCTGGTGACCGGGCAGCCGGACTGGGGCAGCGTGCGCATCGAGTACAGCGGAGCCCAGATCGACCAGTCCGGCCTGC TGCGGTACCTGGTCAGCTTCCGCAACCACAACGAGTTCCACGAACAATGCGTGGAGCGCATCTTCATGGACCTGTGGACG CGCTGCCGCCCGATCAAGCTGTCGGTGTACGCGCGCTACACCCGCCGTGGCGGGCTGGACATCAACCCGCTGCGCACCAG CCACCCCCAGGCGCTGCCAGCCAACGTCCGCACGGCGCGGCAGTGA
Upstream 100 bases:
>100_bases CGCTCCATGGCGGAGCCCCCGTCGTCGCAGGCGACAAATGGATCGCCACGAAGTGGCTGCGCGAACGGCGTTTCGAATGA ACGACGCCGGCGGACACACC
Downstream 100 bases:
>100_bases GGCGGCCGCCGCGGCCCGTCAGTCCCCGGCACGCCGCAGCTGCTCGAGCCGCGCGGCGATGGCATCGACATCGAGCGCAT CCTCGGCATGGGCCAGATAG
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ
Sequences:
>Translated_281_residues MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ >Mature_281_residues MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1789158, Length=275, Percent_Identity=51.6363636363636, Blast_Score=273, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_ACIAC (A1TLC4)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969536.1 - ProteinModelPortal: A1TLC4 - SMR: A1TLC4 - STRING: A1TLC4 - GeneID: 4665187 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1170 - NMPDR: fig|397945.5.peg.1021 - eggNOG: COG0780 - HOGENOM: HBG289139 - OMA: PFRSNFE - PhylomeDB: A1TLC4 - ProtClustDB: PRK11792 - BioCyc: AAVE397945:AAVE_1170-MONOMER - GO: GO:0005737 - HAMAP: MF_00817 - InterPro: IPR016428 - InterPro: IPR020602 - PIRSF: PIRSF004750 - TIGRFAMs: TIGR03138
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 31823; Mature: 31823
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNL CCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC RGKPQVALAHITVPCETPNIIESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGS CCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC DRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYTPAPELLHANHGEAPVTETLT CCEEEEEEEEECCHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCHHHHHH SHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT HHHHHCCCEEECCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ CCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNL CCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC RGKPQVALAHITVPCETPNIIESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGS CCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC DRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYTPAPELLHANHGEAPVTETLT CCEEEEEEEEECCHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCHHHHHH SHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT HHHHHCCCEEECCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ CCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA