Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is queF

Identifier: 120609858

GI number: 120609858

Start: 1290772

End: 1291617

Strand: Reverse

Name: queF

Synonym: Aave_1170

Alternate gene names: 120609858

Gene position: 1291617-1290772 (Counterclockwise)

Preceding gene: 120609859

Following gene: 120609855

Centisome position: 24.13

GC content: 67.02

Gene sequence:

>846_bases
ATGAATACTCCCGACCAATCCCAGCTGGGCCGCGTCTCCGGCTATGCCGACCAGTACGACGCCTCGCTGCTGTTCCCCCT
GCCCCGCCAGCCCAAGCGCCACGAAATCGGCGTGACGGGCACCCCGCCCTTTTTCGGGGCGGACCTGTGGACCGCCTTCG
AGCTGTCGTGGCTGAACCTGCGCGGCAAGCCGCAGGTCGCCCTCGCGCACATCACCGTTCCCTGCGAGACCCCCAACATC
ATCGAGAGCAAGTCGTTCAAGCTCTACCTGAACAGCTTCAACAACACGCGATTCGCGGATGCCGCACAAGTGCAGACGCG
CATCCGGACGGACATCAGCGAGGCCGCGTGGCGCGGTTCGGACCGCCAGGCGACCGTGGGCGTGAAACTGGTGCTGCCCG
AGATGTTCGACCGCGAACCCGTGCAGGAGCTCGACGGCCTGCTGCTGGACCGCCTGGACGTGGAGTGCACGCACTACACC
CCCGCCCCGGAGCTGCTGCATGCGAACCATGGCGAGGCCCCCGTCACGGAAACGCTCACCAGCCACCTGCTCAAGAGCAA
CTGCCTGGTGACCGGGCAGCCGGACTGGGGCAGCGTGCGCATCGAGTACAGCGGAGCCCAGATCGACCAGTCCGGCCTGC
TGCGGTACCTGGTCAGCTTCCGCAACCACAACGAGTTCCACGAACAATGCGTGGAGCGCATCTTCATGGACCTGTGGACG
CGCTGCCGCCCGATCAAGCTGTCGGTGTACGCGCGCTACACCCGCCGTGGCGGGCTGGACATCAACCCGCTGCGCACCAG
CCACCCCCAGGCGCTGCCAGCCAACGTCCGCACGGCGCGGCAGTGA

Upstream 100 bases:

>100_bases
CGCTCCATGGCGGAGCCCCCGTCGTCGCAGGCGACAAATGGATCGCCACGAAGTGGCTGCGCGAACGGCGTTTCGAATGA
ACGACGCCGGCGGACACACC

Downstream 100 bases:

>100_bases
GGCGGCCGCCGCGGCCCGTCAGTCCCCGGCACGCCGCAGCTGCTCGAGCCGCGCGGCGATGGCATCGACATCGAGCGCAT
CCTCGGCATGGGCCAGATAG

Product: 7-cyano-7-deazaguanine reductase

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI
IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT
PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT
RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ

Sequences:

>Translated_281_residues
MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI
IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT
PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT
RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ
>Mature_281_residues
MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNLRGKPQVALAHITVPCETPNI
IESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGSDRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYT
PAPELLHANHGEAPVTETLTSHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT
RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ

Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)

COG id: COG0780

COG function: function code R; Enzyme related to GTP cyclohydrolase I

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily

Homologues:

Organism=Escherichia coli, GI1789158, Length=275, Percent_Identity=51.6363636363636, Blast_Score=273, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QUEF_ACIAC (A1TLC4)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_969536.1
- ProteinModelPortal:   A1TLC4
- SMR:   A1TLC4
- STRING:   A1TLC4
- GeneID:   4665187
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_1170
- NMPDR:   fig|397945.5.peg.1021
- eggNOG:   COG0780
- HOGENOM:   HBG289139
- OMA:   PFRSNFE
- PhylomeDB:   A1TLC4
- ProtClustDB:   PRK11792
- BioCyc:   AAVE397945:AAVE_1170-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00817
- InterPro:   IPR016428
- InterPro:   IPR020602
- PIRSF:   PIRSF004750
- TIGRFAMs:   TIGR03138

Pfam domain/function: PF01227 GTP_cyclohydroI

EC number: =1.7.1.13

Molecular weight: Translated: 31823; Mature: 31823

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNL
CCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC
RGKPQVALAHITVPCETPNIIESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGS
CCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYTPAPELLHANHGEAPVTETLT
CCEEEEEEEEECCHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCHHHHHH
SHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT
HHHHHCCCEEECCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ
CCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTPDQSQLGRVSGYADQYDASLLFPLPRQPKRHEIGVTGTPPFFGADLWTAFELSWLNL
CCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC
RGKPQVALAHITVPCETPNIIESKSFKLYLNSFNNTRFADAAQVQTRIRTDISEAAWRGS
CCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DRQATVGVKLVLPEMFDREPVQELDGLLLDRLDVECTHYTPAPELLHANHGEAPVTETLT
CCEEEEEEEEECCHHCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCCCHHHHHH
SHLLKSNCLVTGQPDWGSVRIEYSGAQIDQSGLLRYLVSFRNHNEFHEQCVERIFMDLWT
HHHHHCCCEEECCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RCRPIKLSVYARYTRRGGLDINPLRTSHPQALPANVRTARQ
CCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA