Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is ykgJ [H]

Identifier: 120609847

GI number: 120609847

Start: 1279101

End: 1279427

Strand: Reverse

Name: ykgJ [H]

Synonym: Aave_1159

Alternate gene names: 120609847

Gene position: 1279427-1279101 (Counterclockwise)

Preceding gene: 120609850

Following gene: 120609845

Centisome position: 23.9

GC content: 73.39

Gene sequence:

>327_bases
ATGAGCATCCACCCCTGCCTGAGCTGCGGCGCCTGCTGCGCGAGCTTCCGCGTCGATTTCTCGGTCCACGAATCGGAGGA
TGAAGGGGGCAGCGTGCCCGCCGGCCTCACGGTGGAAGTGAACGCCGGCCTGCGCCGCATGCGCGGGACGGACCACGCGC
CCCCGCGCTGCGCCGCGCTGTCGGGCACGGTGGGAACGCGGGCGGCCTGCGGCATCTATGAATGGCGGCCGTCGCCCTGC
CGCGAGTTCGAGGCCGGCAGCGAGGCCTGCGGCCGGGCGAGGCGCCGGCACGGCATGGGACCGCTGCCGGAAGGCTTCAT
CCTGTAG

Upstream 100 bases:

>100_bases
ATGCCTGGATTTTCTCTCGTCCCGGCGAGAGAGGGGCAGCCGCTGGCCGACATCCCCGCCGCGTTGGGCACAATCCGGCC
CGCAACGTTCCCGGATTTTC

Downstream 100 bases:

>100_bases
CCGGCACGGGGAGGCCGCCGACGCGGCCCTTGAACTCCTGCAGCGAGAAATAGCTGTGCACGCGCCGCACGCCGGGCAGG
CGGTGCAGGCGGTTCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPC
REFEAGSEACGRARRRHGMGPLPEGFIL

Sequences:

>Translated_108_residues
MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPC
REFEAGSEACGRARRRHGMGPLPEGFIL
>Mature_107_residues
SIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPCR
EFEAGSEACGRARRRHGMGPLPEGFIL

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To A.calcoaceticus putative ferredoxin [H]

Homologues:

Organism=Escherichia coli, GI2367105, Length=107, Percent_Identity=49.5327102803738, Blast_Score=102, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 11449; Mature: 11318

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAAL
CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEC
SGTVGTRAACGIYEWRPSPCREFEAGSEACGRARRRHGMGPLPEGFIL
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAAL
CCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEC
SGTVGTRAACGIYEWRPSPCREFEAGSEACGRARRRHGMGPLPEGFIL
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]