Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ykgJ [H]
Identifier: 120609847
GI number: 120609847
Start: 1279101
End: 1279427
Strand: Reverse
Name: ykgJ [H]
Synonym: Aave_1159
Alternate gene names: 120609847
Gene position: 1279427-1279101 (Counterclockwise)
Preceding gene: 120609850
Following gene: 120609845
Centisome position: 23.9
GC content: 73.39
Gene sequence:
>327_bases ATGAGCATCCACCCCTGCCTGAGCTGCGGCGCCTGCTGCGCGAGCTTCCGCGTCGATTTCTCGGTCCACGAATCGGAGGA TGAAGGGGGCAGCGTGCCCGCCGGCCTCACGGTGGAAGTGAACGCCGGCCTGCGCCGCATGCGCGGGACGGACCACGCGC CCCCGCGCTGCGCCGCGCTGTCGGGCACGGTGGGAACGCGGGCGGCCTGCGGCATCTATGAATGGCGGCCGTCGCCCTGC CGCGAGTTCGAGGCCGGCAGCGAGGCCTGCGGCCGGGCGAGGCGCCGGCACGGCATGGGACCGCTGCCGGAAGGCTTCAT CCTGTAG
Upstream 100 bases:
>100_bases ATGCCTGGATTTTCTCTCGTCCCGGCGAGAGAGGGGCAGCCGCTGGCCGACATCCCCGCCGCGTTGGGCACAATCCGGCC CGCAACGTTCCCGGATTTTC
Downstream 100 bases:
>100_bases CCGGCACGGGGAGGCCGCCGACGCGGCCCTTGAACTCCTGCAGCGAGAAATAGCTGTGCACGCGCCGCACGCCGGGCAGG CGGTGCAGGCGGTTCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPC REFEAGSEACGRARRRHGMGPLPEGFIL
Sequences:
>Translated_108_residues MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPC REFEAGSEACGRARRRHGMGPLPEGFIL >Mature_107_residues SIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAALSGTVGTRAACGIYEWRPSPCR EFEAGSEACGRARRRHGMGPLPEGFIL
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To A.calcoaceticus putative ferredoxin [H]
Homologues:
Organism=Escherichia coli, GI2367105, Length=107, Percent_Identity=49.5327102803738, Blast_Score=102, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 11449; Mature: 11318
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAAL CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEC SGTVGTRAACGIYEWRPSPCREFEAGSEACGRARRRHGMGPLPEGFIL CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SIHPCLSCGACCASFRVDFSVHESEDEGGSVPAGLTVEVNAGLRRMRGTDHAPPRCAAL CCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEC SGTVGTRAACGIYEWRPSPCREFEAGSEACGRARRRHGMGPLPEGFIL CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]