Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is kynB
Identifier: 120609845
GI number: 120609845
Start: 1277850
End: 1278500
Strand: Reverse
Name: kynB
Synonym: Aave_1157
Alternate gene names: 120609845
Gene position: 1278500-1277850 (Counterclockwise)
Preceding gene: 120609847
Following gene: 120609844
Centisome position: 23.88
GC content: 71.27
Gene sequence:
>651_bases ATGACCACCCCCCGCATGCTGTGGGACATTTCCGCGCCGGTACACGCCGGCAGCCCGGTGTTCCCCGGCGACACGCCCTA TTCGCAGCAGTGGTGCGCCACGATCGGCCCGCAGTGCCCGGTGAACGTGAGCGCCCTCGCGATGTCGCCGCACGTCGGCA CGCATGCGGACGCGCCCCTTCACTACGACCCGCAGGGAGCGACGATCGGCGACGTGCCGCTCGATGCCTTCATCGGCCCC TGCCGCGTGATCCATGCGATCGGCAGGGGCCCGCTGGTCGCATGGGAGCACATCGCCCACGCGCTGGGCGCCGACCGGCC CGCCCTGCCGCAGCGCGTGCTCGTACGCACCTATGAACGCATGCCGCTGGACCGCTGGGATGCCGCGCTGGCCGCCTACG CACCGGACACCATCGAACGCCTGGCCGACCTGGGCGTGGTTCTGGTGGGCATCGACACCGCCAGCATCGACCCCGCCGAC AGCAAGTCGCTGGACAGCCACCAGGTGATCCGCCGGCGCGGGCTGCGCGTGCTGGAGAACCTCGTGCTCGACGAGGTGCC AGAAGGCGACTACGAACTGATCGCCCTGCCGCTGAAGCTCACCACGGCCGACGCCTCGCCCGTGCGCGCGGTGCTTCGGA CGCCGGCCTGA
Upstream 100 bases:
>100_bases ATTTTTCCAATTTTCAGAGCTGTAGGGATTAAACGACACCACGCGCCGCTGCCCTGCCTAGGATGCGCGCGTTGGCAGCG ATGCCGCCCAAGGAGCGCCC
Downstream 100 bases:
>100_bases CACGGCCTTCCCGCCGCCCCCTTCCCGATCTCTTGCCCTGCCCTTGACCATGACCACACTCGACGACTGCCGCGCACTGG ATGCGCACGACCCCCTGCGC
Product: cyclase family protein
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGP CRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPAD SKSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA
Sequences:
>Translated_216_residues MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGP CRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPAD SKSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA >Mature_215_residues TTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGPC RVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADS KSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KYNB_ACIAC (A1TLB1)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969523.1 - ProteinModelPortal: A1TLB1 - SMR: A1TLB1 - STRING: A1TLB1 - GeneID: 4668851 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1157 - NMPDR: fig|397945.5.peg.1007 - eggNOG: COG1878 - HOGENOM: HBG686791 - OMA: CPVNVGR - ProtClustDB: CLSK953240 - BioCyc: AAVE397945:AAVE_1157-MONOMER - InterPro: IPR017484 - InterPro: IPR007325 - TIGRFAMs: TIGR03035
Pfam domain/function: PF04199 Cyclase
EC number: =3.5.1.9
Molecular weight: Translated: 23230; Mature: 23099
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPL CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC HYDPQGATIGDVPLDAFIGPCRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYER EECCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADSKSLDSHQVIRRRGLRVLEN CCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA HHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCC >Mature Secondary Structure TTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPL CCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC HYDPQGATIGDVPLDAFIGPCRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYER EECCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADSKSLDSHQVIRRRGLRVLEN CCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA HHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA