Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is kynB

Identifier: 120609845

GI number: 120609845

Start: 1277850

End: 1278500

Strand: Reverse

Name: kynB

Synonym: Aave_1157

Alternate gene names: 120609845

Gene position: 1278500-1277850 (Counterclockwise)

Preceding gene: 120609847

Following gene: 120609844

Centisome position: 23.88

GC content: 71.27

Gene sequence:

>651_bases
ATGACCACCCCCCGCATGCTGTGGGACATTTCCGCGCCGGTACACGCCGGCAGCCCGGTGTTCCCCGGCGACACGCCCTA
TTCGCAGCAGTGGTGCGCCACGATCGGCCCGCAGTGCCCGGTGAACGTGAGCGCCCTCGCGATGTCGCCGCACGTCGGCA
CGCATGCGGACGCGCCCCTTCACTACGACCCGCAGGGAGCGACGATCGGCGACGTGCCGCTCGATGCCTTCATCGGCCCC
TGCCGCGTGATCCATGCGATCGGCAGGGGCCCGCTGGTCGCATGGGAGCACATCGCCCACGCGCTGGGCGCCGACCGGCC
CGCCCTGCCGCAGCGCGTGCTCGTACGCACCTATGAACGCATGCCGCTGGACCGCTGGGATGCCGCGCTGGCCGCCTACG
CACCGGACACCATCGAACGCCTGGCCGACCTGGGCGTGGTTCTGGTGGGCATCGACACCGCCAGCATCGACCCCGCCGAC
AGCAAGTCGCTGGACAGCCACCAGGTGATCCGCCGGCGCGGGCTGCGCGTGCTGGAGAACCTCGTGCTCGACGAGGTGCC
AGAAGGCGACTACGAACTGATCGCCCTGCCGCTGAAGCTCACCACGGCCGACGCCTCGCCCGTGCGCGCGGTGCTTCGGA
CGCCGGCCTGA

Upstream 100 bases:

>100_bases
ATTTTTCCAATTTTCAGAGCTGTAGGGATTAAACGACACCACGCGCCGCTGCCCTGCCTAGGATGCGCGCGTTGGCAGCG
ATGCCGCCCAAGGAGCGCCC

Downstream 100 bases:

>100_bases
CACGGCCTTCCCGCCGCCCCCTTCCCGATCTCTTGCCCTGCCCTTGACCATGACCACACTCGACGACTGCCGCGCACTGG
ATGCGCACGACCCCCTGCGC

Product: cyclase family protein

Products: NA

Alternate protein names: KFA; N-formylkynurenine formamidase

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGP
CRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPAD
SKSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA

Sequences:

>Translated_216_residues
MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGP
CRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPAD
SKSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA
>Mature_215_residues
TTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPLHYDPQGATIGDVPLDAFIGPC
RVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYERMPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADS
KSLDSHQVIRRRGLRVLENLVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA

Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kynB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KYNB_ACIAC (A1TLB1)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_969523.1
- ProteinModelPortal:   A1TLB1
- SMR:   A1TLB1
- STRING:   A1TLB1
- GeneID:   4668851
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_1157
- NMPDR:   fig|397945.5.peg.1007
- eggNOG:   COG1878
- HOGENOM:   HBG686791
- OMA:   CPVNVGR
- ProtClustDB:   CLSK953240
- BioCyc:   AAVE397945:AAVE_1157-MONOMER
- InterPro:   IPR017484
- InterPro:   IPR007325
- TIGRFAMs:   TIGR03035

Pfam domain/function: PF04199 Cyclase

EC number: =3.5.1.9

Molecular weight: Translated: 23230; Mature: 23099

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPL
CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
HYDPQGATIGDVPLDAFIGPCRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYER
EECCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADSKSLDSHQVIRRRGLRVLEN
CCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA
HHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCC
>Mature Secondary Structure 
TTPRMLWDISAPVHAGSPVFPGDTPYSQQWCATIGPQCPVNVSALAMSPHVGTHADAPL
CCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
HYDPQGATIGDVPLDAFIGPCRVIHAIGRGPLVAWEHIAHALGADRPALPQRVLVRTYER
EECCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MPLDRWDAALAAYAPDTIERLADLGVVLVGIDTASIDPADSKSLDSHQVIRRRGLRVLEN
CCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LVLDEVPEGDYELIALPLKLTTADASPVRAVLRTPA
HHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA