Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is add [H]
Identifier: 120609828
GI number: 120609828
Start: 1250888
End: 1252015
Strand: Direct
Name: add [H]
Synonym: Aave_1138
Alternate gene names: 120609828
Gene position: 1250888-1252015 (Clockwise)
Preceding gene: 120609827
Following gene: 120609829
Centisome position: 23.37
GC content: 69.33
Gene sequence:
>1128_bases ATGCTCTGCGCTGCGCGCATCCGTGCCGCCCTTCCTCCCCAAAGGCTCCCCATGACCGATTCCCCTACCGCACCCCCGCC GCATTTCGGCGGCATCGCCACGGAGCGCCTGCCCGACCTGCTGCGCGCCATGCCCAAGGCGGAGCTGCACATGCACATCG AGGGCTCGCTCGAGCCCGAACTGATCTTCGCGCTCGCCGAGCGCAACGGCGTGGCGCTGCCCTATGCCGACGTGGAGTCG CTGCGCGCCGCCTACGCCTTCACCAACCTGCAGAGCTTCCTGGACATCTACTACGCCGGTGCGAGCGTGCTGCTGCACGA GCAGGATTTCTACGACATGGCCTGGGCCTACCTGCAGCGCGCGGCCGCCGACCACATCGTGCACACCGAGATGTTCTTCG ATCCACAGACGCACACCGCGCGCGGCGTCGGCATCGACGTGGTGATCCACGGCCTGCACCGCGCCTGCGAGGACGCCCGG ACGCAACTGGGCGTGAGCGCCTCGCTGATCCTGTGCTTCCTGCGCCACCTGAGCGAAGAAGACGCCTTCGAGACGCTGGA GCAGGCGCTGCCCTACCGCGACCGCTTCATCGGCGTCGGCCTGGATTCGAGCGAGGTGGGCCACCCGCCGGAGAAGTTCG CCCGCGTGTTCGCGCGCTGCGGCGAACTGGGCCTGCACCGCGTCGCGCACGCGGGCGAGGAGGGGCCGCCGGCCTATATC TGGAGCGCGCTCGACGTGCTGCGCGCCGAGCGCATCGACCACGGCGTGCAGGCCGTGCACGACCCGGCCCTGATGCGCCG GCTGGCCGCCGAGCGCGTGGCGCTCACCGTCTGCCCGCTGTCCAACGAGAAGCTGTGCGTCTTCCCCGACCTGGCGGACC ACAACATCCAGGCCCTGCTGGACGCGGGCCTGGCGGCCACGGTGAACTCGGACGACCCTGCCTATTTCGGGGGCTACCTG AACACGAATTTCGTGCGCCTGTTCGAGGCCGTTCCCACGCTGACGGCGGCGCATGCCTACCAGCTCGCATCCAACAGTTT CGATGCGAGCTTCGTTCCGGACGAGGACAAGCAGGCCTGGCGGCGCCAGTTGCAGGCCTGCTTCGCGGGTTTCGCAGCCC GGCGCTGA
Upstream 100 bases:
>100_bases ATGGCGGGCCAGAGCTGGAACGCGGCCACCTTCCTGCTGGCCCGGCGCGCGCTGCAGGGGCTCGATTCCGCCTGGTAGCC CGCGCCCCCCGGGGCGCCTT
Downstream 100 bases:
>100_bases ACGGGTCCGGAATCCCGGGTTTTCCACGGGTCATTGCGGATCGACGGCGGGGCAGTGGTGGCGCGAGAATTCCCCTGAGA GCCCAACCGCTCCAGGGCCG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLCAARIRAALPPQRLPMTDSPTAPPPHFGGIATERLPDLLRAMPKAELHMHIEGSLEPELIFALAERNGVALPYADVES LRAAYAFTNLQSFLDIYYAGASVLLHEQDFYDMAWAYLQRAAADHIVHTEMFFDPQTHTARGVGIDVVIHGLHRACEDAR TQLGVSASLILCFLRHLSEEDAFETLEQALPYRDRFIGVGLDSSEVGHPPEKFARVFARCGELGLHRVAHAGEEGPPAYI WSALDVLRAERIDHGVQAVHDPALMRRLAAERVALTVCPLSNEKLCVFPDLADHNIQALLDAGLAATVNSDDPAYFGGYL NTNFVRLFEAVPTLTAAHAYQLASNSFDASFVPDEDKQAWRRQLQACFAGFAARR
Sequences:
>Translated_375_residues MLCAARIRAALPPQRLPMTDSPTAPPPHFGGIATERLPDLLRAMPKAELHMHIEGSLEPELIFALAERNGVALPYADVES LRAAYAFTNLQSFLDIYYAGASVLLHEQDFYDMAWAYLQRAAADHIVHTEMFFDPQTHTARGVGIDVVIHGLHRACEDAR TQLGVSASLILCFLRHLSEEDAFETLEQALPYRDRFIGVGLDSSEVGHPPEKFARVFARCGELGLHRVAHAGEEGPPAYI WSALDVLRAERIDHGVQAVHDPALMRRLAAERVALTVCPLSNEKLCVFPDLADHNIQALLDAGLAATVNSDDPAYFGGYL NTNFVRLFEAVPTLTAAHAYQLASNSFDASFVPDEDKQAWRRQLQACFAGFAARR >Mature_375_residues MLCAARIRAALPPQRLPMTDSPTAPPPHFGGIATERLPDLLRAMPKAELHMHIEGSLEPELIFALAERNGVALPYADVES LRAAYAFTNLQSFLDIYYAGASVLLHEQDFYDMAWAYLQRAAADHIVHTEMFFDPQTHTARGVGIDVVIHGLHRACEDAR TQLGVSASLILCFLRHLSEEDAFETLEQALPYRDRFIGVGLDSSEVGHPPEKFARVFARCGELGLHRVAHAGEEGPPAYI WSALDVLRAERIDHGVQAVHDPALMRRLAAERVALTVCPLSNEKLCVFPDLADHNIQALLDAGLAATVNSDDPAYFGGYL NTNFVRLFEAVPTLTAAHAYQLASNSFDASFVPDEDKQAWRRQLQACFAGFAARR
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=340, Percent_Identity=25.2941176470588, Blast_Score=112, Evalue=5e-25, Organism=Escherichia coli, GI1787910, Length=332, Percent_Identity=29.8192771084337, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32565969, Length=339, Percent_Identity=23.0088495575221, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538512, Length=339, Percent_Identity=23.0088495575221, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324188, Length=329, Percent_Identity=41.3373860182371, Blast_Score=280, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 41379; Mature: 41379
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCAARIRAALPPQRLPMTDSPTAPPPHFGGIATERLPDLLRAMPKAELHMHIEGSLEPE CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHH LIFALAERNGVALPYADVESLRAAYAFTNLQSFLDIYYAGASVLLHEQDFYDMAWAYLQR HEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AAADHIVHTEMFFDPQTHTARGVGIDVVIHGLHRACEDARTQLGVSASLILCFLRHLSEE HHHHHHEEHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC DAFETLEQALPYRDRFIGVGLDSSEVGHPPEKFARVFARCGELGLHRVAHAGEEGPPAYI HHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WSALDVLRAERIDHGVQAVHDPALMRRLAAERVALTVCPLSNEKLCVFPDLADHNIQALL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHH DAGLAATVNSDDPAYFGGYLNTNFVRLFEAVPTLTAAHAYQLASNSFDASFVPDEDKQAW HCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH RRQLQACFAGFAARR HHHHHHHHHHHHCCC >Mature Secondary Structure MLCAARIRAALPPQRLPMTDSPTAPPPHFGGIATERLPDLLRAMPKAELHMHIEGSLEPE CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHH LIFALAERNGVALPYADVESLRAAYAFTNLQSFLDIYYAGASVLLHEQDFYDMAWAYLQR HEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AAADHIVHTEMFFDPQTHTARGVGIDVVIHGLHRACEDARTQLGVSASLILCFLRHLSEE HHHHHHEEHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC DAFETLEQALPYRDRFIGVGLDSSEVGHPPEKFARVFARCGELGLHRVAHAGEEGPPAYI HHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WSALDVLRAERIDHGVQAVHDPALMRRLAAERVALTVCPLSNEKLCVFPDLADHNIQALL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHH DAGLAATVNSDDPAYFGGYLNTNFVRLFEAVPTLTAAHAYQLASNSFDASFVPDEDKQAW HCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH RRQLQACFAGFAARR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA