Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120609797

Identifier: 120609797

GI number: 120609797

Start: 1211898

End: 1212452

Strand: Reverse

Name: 120609797

Synonym: Aave_1106

Alternate gene names: NA

Gene position: 1212452-1211898 (Counterclockwise)

Preceding gene: 120609800

Following gene: 120609796

Centisome position: 22.65

GC content: 68.83

Gene sequence:

>555_bases
GTGCACATCCTGAACGCGCTCTACCAGCAGAACACGCTCTACCGGCAGGTCACGTCCAAGGTCGAGGGCATCAAGCATCC
CTACCTGAACGTGGGCCGCATCGAGGGCGGCACCAACACCAACGTCGTGCCCGGCAAGGTGGTCTTCAAGCTCGACCGCC
GCATGATCCCGGAAGAGAACCCCGTGGAGGTGGAAGCCACCATCCGCCGCGTGATCGACGAGGCCGCCGCCGGCTGCGAA
GGCATCCGCGTGGAAGTGCGCCGCCTGCTGCTCGCCAACGCGATGACGCCGCTGGAAGGCAACCGCCCGCTGGTGGACGC
GATCCAGCGCCATGCCGAGGCCGTGTTCGGCGAGCGCCCGCCCGCGGTGGGCACGCCGCTCTACACCGATGTGCGGCTCT
ACGTGGAGCGCGGCATTCCCGGCGTGATCTATGGCGCGGGGCCACGTACGGTGCTCGAATCGCACGCCAAGCGCGCGGAC
GAGCGTGTGGAGCTCGAGGACCTGCGCCGCGCCACCAAGGTGGTCGCGCGGGCGCTGCACGATCTGCTGGGTTGA

Upstream 100 bases:

>100_bases
AACAGCAACGGTAGAGCAATGGCCGCTCAGTGGAAAGTTACCAGTTGCAATCCAAAGATAGATCGTGGGGTAGCCACGCA
TTGATGCGCTGCAGGGCGCC

Downstream 100 bases:

>100_bases
CAGGGACGGGTTTTGGTCAGGGCATGACAGCGGAGTCGGGCAGCCGCGGACAGTCCGTGCATTCGGGAGGCACGTTCTCG
AACACCACATCTCGCCCGAC

Product: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase

Products: NA

Alternate protein names: Succinyl-Diaminopimelate Desuccinylase; Acetylornithine Deacetylase; Peptidase Dimerisation Domain-Containing Protein; Peptidase Dimerization Domain Protein; Amino Acid Deacylase; Acetylornithine Deacetylase Or; Peptidase; Hydrolase; Peptidase ArgE/DapE Family Protein; Peptidase Family

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE
GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD
ERVELEDLRRATKVVARALHDLLG

Sequences:

>Translated_184_residues
MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE
GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD
ERVELEDLRRATKVVARALHDLLG
>Mature_184_residues
MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE
GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD
ERVELEDLRRATKVVARALHDLLG

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20460; Mature: 20460

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEEN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCC
PVEVEATIRRVIDEAAAGCEGIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
PAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRADERVELEDLRRATKVVARALH
CCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DLLG
HHHC
>Mature Secondary Structure
MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEEN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCC
PVEVEATIRRVIDEAAAGCEGIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
PAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRADERVELEDLRRATKVVARALH
CCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DLLG
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA