Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609797
Identifier: 120609797
GI number: 120609797
Start: 1211898
End: 1212452
Strand: Reverse
Name: 120609797
Synonym: Aave_1106
Alternate gene names: NA
Gene position: 1212452-1211898 (Counterclockwise)
Preceding gene: 120609800
Following gene: 120609796
Centisome position: 22.65
GC content: 68.83
Gene sequence:
>555_bases GTGCACATCCTGAACGCGCTCTACCAGCAGAACACGCTCTACCGGCAGGTCACGTCCAAGGTCGAGGGCATCAAGCATCC CTACCTGAACGTGGGCCGCATCGAGGGCGGCACCAACACCAACGTCGTGCCCGGCAAGGTGGTCTTCAAGCTCGACCGCC GCATGATCCCGGAAGAGAACCCCGTGGAGGTGGAAGCCACCATCCGCCGCGTGATCGACGAGGCCGCCGCCGGCTGCGAA GGCATCCGCGTGGAAGTGCGCCGCCTGCTGCTCGCCAACGCGATGACGCCGCTGGAAGGCAACCGCCCGCTGGTGGACGC GATCCAGCGCCATGCCGAGGCCGTGTTCGGCGAGCGCCCGCCCGCGGTGGGCACGCCGCTCTACACCGATGTGCGGCTCT ACGTGGAGCGCGGCATTCCCGGCGTGATCTATGGCGCGGGGCCACGTACGGTGCTCGAATCGCACGCCAAGCGCGCGGAC GAGCGTGTGGAGCTCGAGGACCTGCGCCGCGCCACCAAGGTGGTCGCGCGGGCGCTGCACGATCTGCTGGGTTGA
Upstream 100 bases:
>100_bases AACAGCAACGGTAGAGCAATGGCCGCTCAGTGGAAAGTTACCAGTTGCAATCCAAAGATAGATCGTGGGGTAGCCACGCA TTGATGCGCTGCAGGGCGCC
Downstream 100 bases:
>100_bases CAGGGACGGGTTTTGGTCAGGGCATGACAGCGGAGTCGGGCAGCCGCGGACAGTCCGTGCATTCGGGAGGCACGTTCTCG AACACCACATCTCGCCCGAC
Product: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
Products: NA
Alternate protein names: Succinyl-Diaminopimelate Desuccinylase; Acetylornithine Deacetylase; Peptidase Dimerisation Domain-Containing Protein; Peptidase Dimerization Domain Protein; Amino Acid Deacylase; Acetylornithine Deacetylase Or; Peptidase; Hydrolase; Peptidase ArgE/DapE Family Protein; Peptidase Family
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD ERVELEDLRRATKVVARALHDLLG
Sequences:
>Translated_184_residues MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD ERVELEDLRRATKVVARALHDLLG >Mature_184_residues MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEENPVEVEATIRRVIDEAAAGCE GIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRAD ERVELEDLRRATKVVARALHDLLG
Specific function: Unknown
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20460; Mature: 20460
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEEN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCC PVEVEATIRRVIDEAAAGCEGIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC PAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRADERVELEDLRRATKVVARALH CCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DLLG HHHC >Mature Secondary Structure MHILNALYQQNTLYRQVTSKVEGIKHPYLNVGRIEGGTNTNVVPGKVVFKLDRRMIPEEN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCC PVEVEATIRRVIDEAAAGCEGIRVEVRRLLLANAMTPLEGNRPLVDAIQRHAEAVFGERP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC PAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRADERVELEDLRRATKVVARALH CCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DLLG HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA