Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609780
Identifier: 120609780
GI number: 120609780
Start: 1191164
End: 1191376
Strand: Direct
Name: 120609780
Synonym: Aave_1088
Alternate gene names: NA
Gene position: 1191164-1191376 (Clockwise)
Preceding gene: 120609779
Following gene: 120609782
Centisome position: 22.25
GC content: 66.67
Gene sequence:
>213_bases ATGGCTACCGCGTCCACTTCCACCGCCCGGCTGGGCGAACTGCGCGAGGCATTGCCCCGCATCGACAGGTTGCTGCGCAG CAACCAGGCGGGCGAAATCGGCGAGGATGTGATCGACGAACTCGTTCAATGCGCCTGGATGGAGTGGAACGCGGGCGCGC TGCGCCTGACGGCCACGGGCCAGAACATCTGCCGCCAGATGCAGGTCCGCTGA
Upstream 100 bases:
>100_bases TGCGCGGCAATGGCCATGTGTTGCTTGCTGGCAATGGCCATCGCGCCTGCATGCTGCCGTGCTAGCCTGTGTCTTGATTT TTCAACCGAAGGTACGTTGC
Downstream 100 bases:
>100_bases TCACGGCGCGCGCAAACGTTTGCGCGCCAGGGCGCCCTCCACCCCAGCCCCGCGCGGGTGTCGCCCGGCTCCGTGCCGCG GCGGCCCCGCCTCGTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MATASTSTARLGELREALPRIDRLLRSNQAGEIGEDVIDELVQCAWMEWNAGALRLTATGQNICRQMQVR
Sequences:
>Translated_70_residues MATASTSTARLGELREALPRIDRLLRSNQAGEIGEDVIDELVQCAWMEWNAGALRLTATGQNICRQMQVR >Mature_69_residues ATASTSTARLGELREALPRIDRLLRSNQAGEIGEDVIDELVQCAWMEWNAGALRLTATGQNICRQMQVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7787; Mature: 7656
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATASTSTARLGELREALPRIDRLLRSNQAGEIGEDVIDELVQCAWMEWNAGALRLTATG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECH QNICRQMQVR HHHHHHHCCC >Mature Secondary Structure ATASTSTARLGELREALPRIDRLLRSNQAGEIGEDVIDELVQCAWMEWNAGALRLTATG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECH QNICRQMQVR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA