Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609755
Identifier: 120609755
GI number: 120609755
Start: 1165534
End: 1166463
Strand: Reverse
Name: 120609755
Synonym: Aave_1062
Alternate gene names: NA
Gene position: 1166463-1165534 (Counterclockwise)
Preceding gene: 120609756
Following gene: 120609754
Centisome position: 21.79
GC content: 75.05
Gene sequence:
>930_bases ATGCCGCCGCGCAGCGGGCCTGACGCCGCGGACCGCCTGCTGCGCCGGCTCGAATGGACCGTGCTGCGCCGCCTCGACGG GCTGCTGCAGGGCGATTACCGCACGCTGCTGCGCGGCGCCGGCGTGGACCTGGCCGACCTGCGCGAATACCAGGCGCACG ACGACGTGCGGCACATCGACTGGAACGTCACCGCGCGGCTCGGCACGCCCCATGTGCGCGTCTTTTCCGAAGACCGCGAG ATGGCCGCCTGGTTCCTGCTCGACCTCAGCCCCTCGGTGGATTTCGGGCCGCCGGGGCAGACCAAGCGCGACCGGCTCAC CGGCTTCGTCGCCGTGCTCGGGCGGCTGCTCACGCGCCACGGCAACCGCGTGGGCGCCCTGCTCTTCGGCCAGGGCATCC CCGCCACCGTGCTGCCGCCGCGCACCGGCCGCACCCATGTGCTGCGCCTCATCGATGCGCTGGCGCCCGCGGGCCCGCCC GCGTCCTCTCCGCCCGGCGCCACCGAGCTGCACCGGCTGCTGCAATCGGCCGCGCCCGTGCTGCGGCGGCGCTCGGCGGT GTTCGTGGTATCGGACTTCCTCTCGGCCCCCGGCTGGGAGAAGCCCCTCGCGCAGTTAGCGCAGCGCCACGACGTGGTCG CCGTGCGCCTGTTCGACCCGCTGGAGATGGCGCTGCCCGACGTGGGCGTGCTGCACCTGCGCGATCCCGAGACCGGAGAG CAGTTGACGGTGGACACGCGCGACCGCGCCTTCCGCCAGCGCTTCGCCCGCCTCGCCGCCGGGCGCGAAGCCGCGTTGCG CTCGGCCCTGGCGCGCGCGGGCGCGGACACGCTCGAACTCGCCACCGACGACGACCTGCTCGACGCGCTGGTGCGCTTCA TGGAACTGCGCGGCCAGCCCGTGCGGTCCCGCCGGCGCGTGCGCGCCTGA
Upstream 100 bases:
>100_bases TCCGACGGGCTCGATGCCGACGCCCTCATCGCCCAGCTCATGGCACGGCTGCCCGCGCCGGCCCGCCCGCTCGCGCACGA TGCCCAGAACGAGGTGCTCC
Downstream 100 bases:
>100_bases TCGCCGGACGCGCCGGACCAACGAACGACAAGGAAGGAGCCGCCCATGGTTTTTCTCTGGCCCGACCTTCTCTGGCTGCT GCTCGCGCTGCCCGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPPRSGPDAADRLLRRLEWTVLRRLDGLLQGDYRTLLRGAGVDLADLREYQAHDDVRHIDWNVTARLGTPHVRVFSEDRE MAAWFLLDLSPSVDFGPPGQTKRDRLTGFVAVLGRLLTRHGNRVGALLFGQGIPATVLPPRTGRTHVLRLIDALAPAGPP ASSPPGATELHRLLQSAAPVLRRRSAVFVVSDFLSAPGWEKPLAQLAQRHDVVAVRLFDPLEMALPDVGVLHLRDPETGE QLTVDTRDRAFRQRFARLAAGREAALRSALARAGADTLELATDDDLLDALVRFMELRGQPVRSRRRVRA
Sequences:
>Translated_309_residues MPPRSGPDAADRLLRRLEWTVLRRLDGLLQGDYRTLLRGAGVDLADLREYQAHDDVRHIDWNVTARLGTPHVRVFSEDRE MAAWFLLDLSPSVDFGPPGQTKRDRLTGFVAVLGRLLTRHGNRVGALLFGQGIPATVLPPRTGRTHVLRLIDALAPAGPP ASSPPGATELHRLLQSAAPVLRRRSAVFVVSDFLSAPGWEKPLAQLAQRHDVVAVRLFDPLEMALPDVGVLHLRDPETGE QLTVDTRDRAFRQRFARLAAGREAALRSALARAGADTLELATDDDLLDALVRFMELRGQPVRSRRRVRA >Mature_308_residues PPRSGPDAADRLLRRLEWTVLRRLDGLLQGDYRTLLRGAGVDLADLREYQAHDDVRHIDWNVTARLGTPHVRVFSEDREM AAWFLLDLSPSVDFGPPGQTKRDRLTGFVAVLGRLLTRHGNRVGALLFGQGIPATVLPPRTGRTHVLRLIDALAPAGPPA SSPPGATELHRLLQSAAPVLRRRSAVFVVSDFLSAPGWEKPLAQLAQRHDVVAVRLFDPLEMALPDVGVLHLRDPETGEQ LTVDTRDRAFRQRFARLAAGREAALRSALARAGADTLELATDDDLLDALVRFMELRGQPVRSRRRVRA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 34232; Mature: 34101
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRSGPDAADRLLRRLEWTVLRRLDGLLQGDYRTLLRGAGVDLADLREYQAHDDVRHID CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEC WNVTARLGTPHVRVFSEDREMAAWFLLDLSPSVDFGPPGQTKRDRLTGFVAVLGRLLTRH CEEEEECCCCEEEEECCCHHEEEHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GNRVGALLFGQGIPATVLPPRTGRTHVLRLIDALAPAGPPASSPPGATELHRLLQSAAPV CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LRRRSAVFVVSDFLSAPGWEKPLAQLAQRHDVVAVRLFDPLEMALPDVGVLHLRDPETGE HHHCCHHEEHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCEEEECCCCCCC QLTVDTRDRAFRQRFARLAAGREAALRSALARAGADTLELATDDDLLDALVRFMELRGQP EEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCC VRSRRRVRA CHHHHCCCC >Mature Secondary Structure PPRSGPDAADRLLRRLEWTVLRRLDGLLQGDYRTLLRGAGVDLADLREYQAHDDVRHID CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEC WNVTARLGTPHVRVFSEDREMAAWFLLDLSPSVDFGPPGQTKRDRLTGFVAVLGRLLTRH CEEEEECCCCEEEEECCCHHEEEHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GNRVGALLFGQGIPATVLPPRTGRTHVLRLIDALAPAGPPASSPPGATELHRLLQSAAPV CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LRRRSAVFVVSDFLSAPGWEKPLAQLAQRHDVVAVRLFDPLEMALPDVGVLHLRDPETGE HHHCCHHEEHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCEEEECCCCCCC QLTVDTRDRAFRQRFARLAAGREAALRSALARAGADTLELATDDDLLDALVRFMELRGQP EEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCC VRSRRRVRA CHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]