Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609691
Identifier: 120609691
GI number: 120609691
Start: 1094201
End: 1094815
Strand: Direct
Name: 120609691
Synonym: Aave_0997
Alternate gene names: NA
Gene position: 1094201-1094815 (Clockwise)
Preceding gene: 120609690
Following gene: 120609692
Centisome position: 20.44
GC content: 65.04
Gene sequence:
>615_bases GTGATTCTCATCAACCTGCTGCCCCACCGCGAGGCAGCCCGGAAACGCCGCAAGGAAGCCTTCCAGGTGGCGATGTTCGC GTCGTTCCTGATGGGCCTCGCGATCGCCGCCGTCGTCTATTGGTGGTTCCAGATGATGATCGGAGAGCAGCAGGGGCGCA ATGCCTTCCTGCAGTCCGAGATCCAGGTCCTGGAGGGGCAGATCAAGGAAATCGCCACGATCGAAGAGGAAATCGCTGCC CTGCGTGCGCGCCAGAAGGCGGTGGAGGATCTCCAGTCCGACCGCAACCTGCCCGTCCATCTGCTTTCGGAACTGGTGCG GCAGCTGCCTGACGGTGTCTACATCACGAGTCTGAAGCAGGCGGACCAGGTCATCACCATGCAGGGCATGGCGCAATCCA ACGAGCGCGTCTCGGAGATGCTGCGCAACCTGGCGGACAACACCCCGTGGTTCTCCAAGCCCGAGCTGGTGGAGATCGTG GCCACGAACGTGGCCCTGACGCCGCGCGACCAGCGCCGGGTGGCTTCGTTCAACGTGCGTTTCCGGCTCATGCGGACCAG CGAGGCGCAGAAGGCCATGGACGGCGCGAGCGCGCCGCGCGCGGCGGGGGGATGA
Upstream 100 bases:
>100_bases AGGGCATGGAGATCGGAAGTTCCGTCCGTCTCAAGAAGATGGTGCGAGAGGCGCCTTCCTACCTGACTTCGTGCGGGCTC GCCATGCGGAGGTTCCTCCA
Downstream 100 bases:
>100_bases GCATGGCGACGAGAAAAAAGACATCCGTGGATTTCGGCGCGCTGCAGGACAGTCTGCAGCGGCAATTCAGGAACCTGGAT CCGAAGGACCCCTCCCTCTG
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: Fimbrial Assembly; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein PilN; PilN Type IV Pilus Assembly Protein; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Fimbrial Biogenesis Protein PilN; Type IV Pilus Assembly Protein Piln; Fimbrial Type-4 Assembly Transmembrane Protein
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG
Sequences:
>Translated_204_residues MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG >Mature_204_residues MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23025; Mature: 23025
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSE CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IQVLEGQIKEIATIEEEIAALRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHH ADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIVATNVALTPRDQRRVASFNVR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEECCCHHHHHHHHHHH FRLMRTSEAQKAMDGASAPRAAGG EEEEHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSE CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IQVLEGQIKEIATIEEEIAALRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHH ADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIVATNVALTPRDQRRVASFNVR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEECCCHHHHHHHHHHH FRLMRTSEAQKAMDGASAPRAAGG EEEEHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA