Click here to switch to the map view.

The map label for this gene is yedY [H]

Identifier: 120609681

GI number: 120609681

Start: 1084309

End: 1085304

Strand: Direct

Name: yedY [H]

Synonym: Aave_0987

Alternate gene names: 120609681

Gene position: 1084309-1085304 (Clockwise)

Preceding gene: 120609680

Following gene: 120609682

Centisome position: 20.26

GC content: 65.06

Gene sequence:

>996_bases
ATGCTCATCCGCAACCACGACGACGGCTTTCTCCACCCCACCGGCAGCGAGATCACCCCGCGCTCGGTTTATGAGGGGCG
CCGCGACCTCATGAAGCTGATGGCCGCGGGTGCGGCCGGTGCCGCCCTGGCATCCTGGGCCGGCCGGGAAGCCCTGGCCC
AGACGGCCCGCCCGGGAAAGCTGGCCGCCCTGGCGGCGGTTCCCAGCAAGGTGGCGGGCGCCACCACCATCGAGAAGCTG
ACAGAGTACAAGGACGCCAGCACCTACAACAACTTCTACGAATTCGGCGTGGACAAGAGCGATCCCGCGCGCAACGCGCA
CACGCTGAGGACTTCGCCATGGACGGTGGAGGTCGAGGGCCTCGTCAACAAGCCCGGCAAGTTCGCCATCGAGGACCTGC
TCAAGCTCAGCCCGCAGGAAGAGCGCATCTACCGGCTGCGCTGCGTCGAGGGCTGGTCGATGGTCATCCCCTGGGTGGGT
TACTCGCTCGCAGAACTCATCAAGCGCGTCGAGCCCCAGGGCAGCGCCAAGTACGTCGAGTTCGTGACCCTGGCCGACAA
GCAGACCATGCCCTACGTGGGCCGGCCCGTTCTGGACTGGCCTTACACGGAAGGCCTGCGCATGGACGAGGCCATGCATC
CGCTCACGCTGCTCGCCTTCGGCATGTACGGCGAAGTCCTGCCCAACCAGAACGGTGCGCCCGTGCGCCTCGTGGTGCCC
TGGAAGTACGGTTTCAAGAGCGCCAAGAGCCTGGTCAAGATCCGCTTCGTCGAGAAGGAGCCCGGCACGGCCTGGAACAA
GGCGGCGAAGCAGGAGTATGGTTTCTATTCCAACGTGAACCCCAATGTGGACCATCCGCGCTGGAGCCAGGCGACGGAAC
GCCGCATCGGCGAGGACGGCCTGTTCGCCAAGAAGCGCAAGACGCTGATGTTCAACGGCTACGAAGCGCAGGTCGGCCAG
CTCTACGCGGGCATGGATCTCAAGAAGTTCTACTGA

Upstream 100 bases:

>100_bases
GCACAGCTACGGAACGTTGTAGCGCGGGATGAGTCTCTCGGAGGGTTCGGCGCGTATAACCGGGGGCTTCCCCCCAGGGC
GCCCCTACCGAGGACCATCC

Downstream 100 bases:

>100_bases
TCCGTGGGGCGCCGCCATCCACACGGTGCCTCGGCCGGATGCGGCCGGCCTGCTGGCTTCCTGTAGACCTCCATGAAAAA
ACTATTGCTGCACCCCGCCG

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLIRNHDDGFLHPTGSEITPRSVYEGRRDLMKLMAAGAAGAALASWAGREALAQTARPGKLAALAAVPSKVAGATTIEKL
TEYKDASTYNNFYEFGVDKSDPARNAHTLRTSPWTVEVEGLVNKPGKFAIEDLLKLSPQEERIYRLRCVEGWSMVIPWVG
YSLAELIKRVEPQGSAKYVEFVTLADKQTMPYVGRPVLDWPYTEGLRMDEAMHPLTLLAFGMYGEVLPNQNGAPVRLVVP
WKYGFKSAKSLVKIRFVEKEPGTAWNKAAKQEYGFYSNVNPNVDHPRWSQATERRIGEDGLFAKKRKTLMFNGYEAQVGQ
LYAGMDLKKFY

Sequences:

>Translated_331_residues
MLIRNHDDGFLHPTGSEITPRSVYEGRRDLMKLMAAGAAGAALASWAGREALAQTARPGKLAALAAVPSKVAGATTIEKL
TEYKDASTYNNFYEFGVDKSDPARNAHTLRTSPWTVEVEGLVNKPGKFAIEDLLKLSPQEERIYRLRCVEGWSMVIPWVG
YSLAELIKRVEPQGSAKYVEFVTLADKQTMPYVGRPVLDWPYTEGLRMDEAMHPLTLLAFGMYGEVLPNQNGAPVRLVVP
WKYGFKSAKSLVKIRFVEKEPGTAWNKAAKQEYGFYSNVNPNVDHPRWSQATERRIGEDGLFAKKRKTLMFNGYEAQVGQ
LYAGMDLKKFY
>Mature_331_residues
MLIRNHDDGFLHPTGSEITPRSVYEGRRDLMKLMAAGAAGAALASWAGREALAQTARPGKLAALAAVPSKVAGATTIEKL
TEYKDASTYNNFYEFGVDKSDPARNAHTLRTSPWTVEVEGLVNKPGKFAIEDLLKLSPQEERIYRLRCVEGWSMVIPWVG
YSLAELIKRVEPQGSAKYVEFVTLADKQTMPYVGRPVLDWPYTEGLRMDEAMHPLTLLAFGMYGEVLPNQNGAPVRLVVP
WKYGFKSAKSLVKIRFVEKEPGTAWNKAAKQEYGFYSNVNPNVDHPRWSQATERRIGEDGLFAKKRKTLMFNGYEAQVGQ
LYAGMDLKKFY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=326, Percent_Identity=50.3067484662577, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37091; Mature: 37091

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRNHDDGFLHPTGSEITPRSVYEGRRDLMKLMAAGAAGAALASWAGREALAQTARPGK
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
LAALAAVPSKVAGATTIEKLTEYKDASTYNNFYEFGVDKSDPARNAHTLRTSPWTVEVEG
EEHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECC
LVNKPGKFAIEDLLKLSPQEERIYRLRCVEGWSMVIPWVGYSLAELIKRVEPQGSAKYVE
CCCCCCHHHHHHHHHCCCCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCEEEE
FVTLADKQTMPYVGRPVLDWPYTEGLRMDEAMHPLTLLAFGMYGEVLPNQNGAPVRLVVP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
WKYGFKSAKSLVKIRFVEKEPGTAWNKAAKQEYGFYSNVNPNVDHPRWSQATERRIGEDG
CCCCHHHHHCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCC
LFAKKRKTLMFNGYEAQVGQLYAGMDLKKFY
CHHHHCCEEEECCCHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MLIRNHDDGFLHPTGSEITPRSVYEGRRDLMKLMAAGAAGAALASWAGREALAQTARPGK
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
LAALAAVPSKVAGATTIEKLTEYKDASTYNNFYEFGVDKSDPARNAHTLRTSPWTVEVEG
EEHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECC
LVNKPGKFAIEDLLKLSPQEERIYRLRCVEGWSMVIPWVGYSLAELIKRVEPQGSAKYVE
CCCCCCHHHHHHHHHCCCCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCCEEEE
FVTLADKQTMPYVGRPVLDWPYTEGLRMDEAMHPLTLLAFGMYGEVLPNQNGAPVRLVVP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
WKYGFKSAKSLVKIRFVEKEPGTAWNKAAKQEYGFYSNVNPNVDHPRWSQATERRIGEDG
CCCCHHHHHCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCC
LFAKKRKTLMFNGYEAQVGQLYAGMDLKKFY
CHHHHCCEEEECCCHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]