Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609671
Identifier: 120609671
GI number: 120609671
Start: 1073301
End: 1074167
Strand: Reverse
Name: 120609671
Synonym: Aave_0977
Alternate gene names: NA
Gene position: 1074167-1073301 (Counterclockwise)
Preceding gene: 120609672
Following gene: 120609670
Centisome position: 20.07
GC content: 70.7
Gene sequence:
>867_bases ATGACCAGTCCCTCCATCCCCCTGCATCTGCTGGCCATCGATCCCCAGAACGATTTCTGCGACCTGCCCGCGGACTGGTG CCCCGTCGATCCCGCCAGCGGCGCTCCTCTGGCCCCATCGCTGCCGGTGGCCGGTGCGCACGGCGACATGCAGCGGCTGG CTTCGTTCGTAGGGCGCGTCGCCAGCCGTCTGGACGCAGTGACCGTCACGCTGGATTCGCACCAGCGCTACGACGTCGCC CATCCTCTCTTCTGGCGGGCGCGCGAAGGCGGAGACGTACAACCCTTCACGCCGATCACCGCCGCGCAGGTACGCGACGG CGCCTTCCTGCCGCGCGATGCCGGCGCCCTGCCCCGCGTGCTGGCGTATCTGGACGCGCTGGAAGCCCAGGGCCGCCATA CCCTCATGGTGTGGCCGGTGCACTGCGAGATAGGAAGCTGGGGCCACGGCGTACATGCCGAGGTGCTGGCGGCCTGCGCG CAGTGGCAGGCCGTGCGTGGACGGGCCGTGCAGGCCGTGTTCAAGGGCATGAATCCATGGACCGAGCACTACAGCGCGAT CGAGGCCGAGGTGCCCGACCCGCAGGATCCGGCGACCGCGCTGAACATGCCGCTGCTGCGGCGCCTGGGCGCGGCGGAGT GCCTGGTGATCGCCGGGGAGGCCGGCAGCCACTGCGTGCGCGCCACCACAGAGCACATCGTGCAGCACCTGCCGCGCCTG CAGCCGGGCTGGACGCCGTCGCGCGTCGTGCTGCTGACCGACTGCATGAGCCCGGTACATGGTTTCGAGAGCCAGCAGGG TGCTTTCCTCGAAGCGATGCGCGCGCAGGGCGTGCGGCTCGCGGCCGCGGACGATTGGGCTGCCTAG
Upstream 100 bases:
>100_bases GAGAAAGGAGCGCGCGTTGCATCTTTTTACCGCCAACTTAGTTGCACAAATAAACTAACTAACTAGAATGGCCTCATCGC CCTTTCCCACGGACACCGCC
Downstream 100 bases:
>100_bases CGCGGGCTGCCCGGCCTTTCCTTCTTCCAGCCTTCCAGGAGCACGCACGCATGGCACCGATCATCCAGAGCCTGCTGGAC ACCGACCTCTACAAGTTCAC
Product: hypothetical protein
Products: nicotinate; NH3
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTSPSIPLHLLAIDPQNDFCDLPADWCPVDPASGAPLAPSLPVAGAHGDMQRLASFVGRVASRLDAVTVTLDSHQRYDVA HPLFWRAREGGDVQPFTPITAAQVRDGAFLPRDAGALPRVLAYLDALEAQGRHTLMVWPVHCEIGSWGHGVHAEVLAACA QWQAVRGRAVQAVFKGMNPWTEHYSAIEAEVPDPQDPATALNMPLLRRLGAAECLVIAGEAGSHCVRATTEHIVQHLPRL QPGWTPSRVVLLTDCMSPVHGFESQQGAFLEAMRAQGVRLAAADDWAA
Sequences:
>Translated_288_residues MTSPSIPLHLLAIDPQNDFCDLPADWCPVDPASGAPLAPSLPVAGAHGDMQRLASFVGRVASRLDAVTVTLDSHQRYDVA HPLFWRAREGGDVQPFTPITAAQVRDGAFLPRDAGALPRVLAYLDALEAQGRHTLMVWPVHCEIGSWGHGVHAEVLAACA QWQAVRGRAVQAVFKGMNPWTEHYSAIEAEVPDPQDPATALNMPLLRRLGAAECLVIAGEAGSHCVRATTEHIVQHLPRL QPGWTPSRVVLLTDCMSPVHGFESQQGAFLEAMRAQGVRLAAADDWAA >Mature_287_residues TSPSIPLHLLAIDPQNDFCDLPADWCPVDPASGAPLAPSLPVAGAHGDMQRLASFVGRVASRLDAVTVTLDSHQRYDVAH PLFWRAREGGDVQPFTPITAAQVRDGAFLPRDAGALPRVLAYLDALEAQGRHTLMVWPVHCEIGSWGHGVHAEVLAACAQ WQAVRGRAVQAVFKGMNPWTEHYSAIEAEVPDPQDPATALNMPLLRRLGAAECLVIAGEAGSHCVRATTEHIVQHLPRLQ PGWTPSRVVLLTDCMSPVHGFESQQGAFLEAMRAQGVRLAAADDWAA
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.19
Molecular weight: Translated: 31020; Mature: 30888
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSIPLHLLAIDPQNDFCDLPADWCPVDPASGAPLAPSLPVAGAHGDMQRLASFVGRV CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ASRLDAVTVTLDSHQRYDVAHPLFWRAREGGDVQPFTPITAAQVRDGAFLPRDAGALPRV HHHHCEEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHH LAYLDALEAQGRHTLMVWPVHCEIGSWGHGVHAEVLAACAQWQAVRGRAVQAVFKGMNPW HHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TEHYSAIEAEVPDPQDPATALNMPLLRRLGAAECLVIAGEAGSHCVRATTEHIVQHLPRL HHHHHHEECCCCCCCCCHHHHCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC QPGWTPSRVVLLTDCMSPVHGFESQQGAFLEAMRAQGVRLAAADDWAA CCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCCC >Mature Secondary Structure TSPSIPLHLLAIDPQNDFCDLPADWCPVDPASGAPLAPSLPVAGAHGDMQRLASFVGRV CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ASRLDAVTVTLDSHQRYDVAHPLFWRAREGGDVQPFTPITAAQVRDGAFLPRDAGALPRV HHHHCEEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHH LAYLDALEAQGRHTLMVWPVHCEIGSWGHGVHAEVLAACAQWQAVRGRAVQAVFKGMNPW HHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TEHYSAIEAEVPDPQDPATALNMPLLRRLGAAECLVIAGEAGSHCVRATTEHIVQHLPRL HHHHHHEECCCCCCCCCHHHHCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC QPGWTPSRVVLLTDCMSPVHGFESQQGAFLEAMRAQGVRLAAADDWAA CCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide; H2O
Specific reaction: nicotinamide + H2O = nicotinate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA