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The map label for this gene is amaB [H]

Identifier: 120609664

GI number: 120609664

Start: 1065092

End: 1066354

Strand: Direct

Name: amaB [H]

Synonym: Aave_0970

Alternate gene names: 120609664

Gene position: 1065092-1066354 (Clockwise)

Preceding gene: 120609663

Following gene: 120609665

Centisome position: 19.9

GC content: 68.33

Gene sequence:

>1263_bases
ATGGACACGACCACCACCGACAAGACCGACATCCGCCAGCTGCGCGTGAATGGCGAGCGCCTCTGGGATTCGCTCATGGA
ACTCGCGCAGATCGGCGCCACGCCCAAGGGCGGCGTCTGCCGCCTCACGCTCACCGACCTGGACAAGCAGGGCCGCGACC
TCGTCACGCGCTGGGCGCGCGAGGCGGGCATGTCCGTCACCATCGACAAGATCGGCAACGTCTTCATGCGCCGCCCGGGC
CGCGACGACAGCCTGCCGCCCATCATGACCGGCAGCCACATCGACACCCAGCCCACGGGCGGCAAGTTCGACGGAAACTA
CGGCGTGCTGGCCGGCATCGAGGTGGTGCGCACGCTCAATGACCATGGCATCGAGACCGAGGCGCCCATCGAGGTCGCCT
TCTGGACCAACGAGGAAGGCAGCCGCTTCGTGCCCGTGATGATGGGCTCGGGCGTGTTCGCCAAGGCCTTCACGCTGGAA
CATGCCTATGCTGCCACCGATACCGAGGGCAAGACCGTGAAGGGCGAGCTGGAGCGCATCGGCTACATCGGCGACCAGGA
GCCCGGCGACCATCCCATCGGCGCGTATTTCGAGACCCACATCGAGCAGGGCCCGGTGCTGGAAGACCACGGCAAGACCA
TCGGCGTGGTGACGGGCGTGCTCGGCATCCGCTGGTACGACTGCACCGTGACAGGCATGGAGGCGCACGCCGGCCCGACG
CCCATGGCCCTGCGCCGCGATGCCCTGCAGGTGGCCACTCGGCTCATGCAGGAGGTGGTGGCCTGCGCGCACCGCCATCC
GCCGCATGGCCGCGGCACGGTGGGCATGGTGCATGTGCACCCCAACAGCCGCAACGTGATCCCGGGGCAGGTCAAGTTCA
GCATCGACCTGCGCAACGCCACCGACGCCGAGTGCGACAGCATGGACCAGGACATCCGCGCCGTGGCCGCCCGGCTCTCG
CAGGAAACGGGGCTGCCCATCCAGATCGACCTGGTTTCCAATTATCCCGCCCAGCCGTTCCATGCCGAGTGCGTGGAGGC
CGTGGGCCGCGCAGCGGAGCGACTGGGCTATTCCCACATGCCCGCGGTGTCCGGCGCCGGCCACGATGCCGTGTACATGG
CGCGCCTGGCGCCGGCCGGCATGATCTTCATCCCGTGCAAGGACGGCATCAGCCACAACGAGATCGAGGATGCCCAGCCC
GGGCACATCACCGCCGGCTGCAACGTGCTGCTGCACGCGATGCTGGAACGGGCCGGCACCTGA

Upstream 100 bases:

>100_bases
CGCCCGGCCTTCGGCGCGAACTTCCAGGCCGTGCACAAGCGTGCGCAGGACCTGGCCCCCAGCGCCGTCGCGCGCGCCTG
AGAACGGACAAGGAAAACCC

Downstream 100 bases:

>100_bases
TGCCTCGCGGGCCGCCGTGCCGGGGGGGGGCGATGCATACGCACGTTGTTACATATTTCCCTCGGTAGTCGGGTTGGCGA
AGGGTGGGGGCTCCCATAAC

Product: amidase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MDTTTTDKTDIRQLRVNGERLWDSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVTRWAREAGMSVTIDKIGNVFMRRPG
RDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLNDHGIETEAPIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLE
HAYAATDTEGKTVKGELERIGYIGDQEPGDHPIGAYFETHIEQGPVLEDHGKTIGVVTGVLGIRWYDCTVTGMEAHAGPT
PMALRRDALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNATDAECDSMDQDIRAVAARLS
QETGLPIQIDLVSNYPAQPFHAECVEAVGRAAERLGYSHMPAVSGAGHDAVYMARLAPAGMIFIPCKDGISHNEIEDAQP
GHITAGCNVLLHAMLERAGT

Sequences:

>Translated_420_residues
MDTTTTDKTDIRQLRVNGERLWDSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVTRWAREAGMSVTIDKIGNVFMRRPG
RDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLNDHGIETEAPIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLE
HAYAATDTEGKTVKGELERIGYIGDQEPGDHPIGAYFETHIEQGPVLEDHGKTIGVVTGVLGIRWYDCTVTGMEAHAGPT
PMALRRDALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNATDAECDSMDQDIRAVAARLS
QETGLPIQIDLVSNYPAQPFHAECVEAVGRAAERLGYSHMPAVSGAGHDAVYMARLAPAGMIFIPCKDGISHNEIEDAQP
GHITAGCNVLLHAMLERAGT
>Mature_420_residues
MDTTTTDKTDIRQLRVNGERLWDSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVTRWAREAGMSVTIDKIGNVFMRRPG
RDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLNDHGIETEAPIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLE
HAYAATDTEGKTVKGELERIGYIGDQEPGDHPIGAYFETHIEQGPVLEDHGKTIGVVTGVLGIRWYDCTVTGMEAHAGPT
PMALRRDALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNATDAECDSMDQDIRAVAARLS
QETGLPIQIDLVSNYPAQPFHAECVEAVGRAAERLGYSHMPAVSGAGHDAVYMARLAPAGMIFIPCKDGISHNEIEDAQP
GHITAGCNVLLHAMLERAGT

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=398, Percent_Identity=31.6582914572864, Blast_Score=189, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45469; Mature: 45469

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTTTDKTDIRQLRVNGERLWDSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVTRWAR
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH
EAGMSVTIDKIGNVFMRRPGRDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLN
HCCCEEEHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DHGIETEAPIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLEHAYAATDTEGKTVKGELERI
HCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEHEEHHHHHCCCCCCCCEEHHHHHHC
GYIGDQEPGDHPIGAYFETHIEQGPVLEDHGKTIGVVTGVLGIRWYDCTVTGMEAHAGPT
CCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCEEHEEHHHHHEEEEEEEEECCCCCCCCC
PMALRRDALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCC
TDAECDSMDQDIRAVAARLSQETGLPIQIDLVSNYPAQPFHAECVEAVGRAAERLGYSHM
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
PAVSGAGHDAVYMARLAPAGMIFIPCKDGISHNEIEDAQPGHITAGCNVLLHAMLERAGT
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTTTTDKTDIRQLRVNGERLWDSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVTRWAR
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH
EAGMSVTIDKIGNVFMRRPGRDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLN
HCCCEEEHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DHGIETEAPIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLEHAYAATDTEGKTVKGELERI
HCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEHEEHHHHHCCCCCCCCEEHHHHHHC
GYIGDQEPGDHPIGAYFETHIEQGPVLEDHGKTIGVVTGVLGIRWYDCTVTGMEAHAGPT
CCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCEEHEEHHHHHEEEEEEEEECCCCCCCCC
PMALRRDALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCC
TDAECDSMDQDIRAVAARLSQETGLPIQIDLVSNYPAQPFHAECVEAVGRAAERLGYSHM
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
PAVSGAGHDAVYMARLAPAGMIFIPCKDGISHNEIEDAQPGHITAGCNVLLHAMLERAGT
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]