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The map label for this gene is omp32 [H]

Identifier: 120609627

GI number: 120609627

Start: 1014270

End: 1015394

Strand: Direct

Name: omp32 [H]

Synonym: Aave_0933

Alternate gene names: 120609627

Gene position: 1014270-1015394 (Clockwise)

Preceding gene: 120609626

Following gene: 120609628

Centisome position: 18.95

GC content: 64.53

Gene sequence:

>1125_bases
ATGCGTATTCCGTCTGTGAAAAAAACGGTGGCCATGACCACCCTGGCAGTAGCGGCTCCCTTCACGTTCGCGCAGCAGGC
CGGCACCAGCAGTGTCCAGCTGTACGGCATCGTGGACATGGCGTATCGCCACACCAACAACGAAGGCCCCGCCGGAAGTC
CGGGCGGCTCGTTGAGCCAGATGGTCGGGGGTGGCATGTCCCAGAGCCGTTGGGGCATCAACGTGACCGAGGACCTGGGT
GGAGGGCTGAAGGCCCTGGTCAACCTGGAAAACCGTTTCGGCGCCGATACGGGCACGCCGGCCACGCCGTACTTCCAGCA
ATCCTGGGTGGGCCTGCAGGGCGGCTTCGGCCGTGTCACGCTGGGCCGCCAATACAACGTTCTCTTCGACCTGGTGACCA
GCACGTACGCGTCCTATCCCTACTCGCCGTACATGGACGTCTACAAGCCCGAGATCGGTTTCGCACTGGGCGCGCGGGCC
GACAACATGATCAAGTACATGGCCGAGGTCGGTCCATGGCGCGGTGGGTTGCAGTATTCCTTCGACGAAAAGAGCGCCAC
GGGCGGCAAGACGGCCGGCGGCTACGTGCGCTATGCGTCGGGCGGCCTGGCGGCGGGCCTGGGCTACCAGCAGTACGAAT
TCGCCTCCGGCAAGAAGATCGACGCCTGGACCCTGGGTGGTTCCTACCGCATGGGCAACTGGTACTTCAACGGCGGCTAT
GGCCAGAACAAGGTGGACGATGGCCTCACGGCCGTGGACCGTGCCGTTCTGGCCGCGATGTGGCAGGGCGGCATCAACGG
CGGGTTCGGCGGCCCGGCCTTCCTTGCGGCCAACAAGCGCACGATCTACAAGATCGGCGCGGGCTACCAGATCACGCCGC
AGATCAACCTGGGCGCGCACTACTTCCGTGCGGAGCAGAAGGGCAATACCGATCTCGCCAAGGCCAAGGCCGACTTCTTC
ACCATGGCGCTCGACTATGCATTCTCCAAGCGGACGGATGCGTACATCGAAGTGGACCACACCAAGCTCAAGGGCGACCA
GGTCAGCCTGAACAACGCCGCCGGCCAGCCCAACGGCGCCAGGTCGCGCACCGGCTACACCATCGGCCTGCGGCATCGCT
TCTGA

Upstream 100 bases:

>100_bases
GGAAAACGACTGTGGGTATGCCGCGAACGGCTGTTCCGATGCAAGTCATTGATTTCTAGAATGAAAGTTCCCTCATCCCT
TCCGCAGAAAGAGACAACAC

Downstream 100 bases:

>100_bases
TCCGTCCCCGGCTGGCGGCACCATGCCACCGGCATGCTGGTCCGCAGCGCAAATCCTGCCGCACCGTGGTGGAGCAGGCC
TGCATGCCCTCCTGCCCGCC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRIPSVKKTVAMTTLAVAAPFTFAQQAGTSSVQLYGIVDMAYRHTNNEGPAGSPGGSLSQMVGGGMSQSRWGINVTEDLG
GGLKALVNLENRFGADTGTPATPYFQQSWVGLQGGFGRVTLGRQYNVLFDLVTSTYASYPYSPYMDVYKPEIGFALGARA
DNMIKYMAEVGPWRGGLQYSFDEKSATGGKTAGGYVRYASGGLAAGLGYQQYEFASGKKIDAWTLGGSYRMGNWYFNGGY
GQNKVDDGLTAVDRAVLAAMWQGGINGGFGGPAFLAANKRTIYKIGAGYQITPQINLGAHYFRAEQKGNTDLAKAKADFF
TMALDYAFSKRTDAYIEVDHTKLKGDQVSLNNAAGQPNGARSRTGYTIGLRHRF

Sequences:

>Translated_374_residues
MRIPSVKKTVAMTTLAVAAPFTFAQQAGTSSVQLYGIVDMAYRHTNNEGPAGSPGGSLSQMVGGGMSQSRWGINVTEDLG
GGLKALVNLENRFGADTGTPATPYFQQSWVGLQGGFGRVTLGRQYNVLFDLVTSTYASYPYSPYMDVYKPEIGFALGARA
DNMIKYMAEVGPWRGGLQYSFDEKSATGGKTAGGYVRYASGGLAAGLGYQQYEFASGKKIDAWTLGGSYRMGNWYFNGGY
GQNKVDDGLTAVDRAVLAAMWQGGINGGFGGPAFLAANKRTIYKIGAGYQITPQINLGAHYFRAEQKGNTDLAKAKADFF
TMALDYAFSKRTDAYIEVDHTKLKGDQVSLNNAAGQPNGARSRTGYTIGLRHRF
>Mature_374_residues
MRIPSVKKTVAMTTLAVAAPFTFAQQAGTSSVQLYGIVDMAYRHTNNEGPAGSPGGSLSQMVGGGMSQSRWGINVTEDLG
GGLKALVNLENRFGADTGTPATPYFQQSWVGLQGGFGRVTLGRQYNVLFDLVTSTYASYPYSPYMDVYKPEIGFALGARA
DNMIKYMAEVGPWRGGLQYSFDEKSATGGKTAGGYVRYASGGLAAGLGYQQYEFASGKKIDAWTLGGSYRMGNWYFNGGY
GQNKVDDGLTAVDRAVLAAMWQGGINGGFGGPAFLAANKRTIYKIGAGYQITPQINLGAHYFRAEQKGNTDLAKAKADFF
TMALDYAFSKRTDAYIEVDHTKLKGDQVSLNNAAGQPNGARSRTGYTIGLRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40152; Mature: 40152

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPSVKKTVAMTTLAVAAPFTFAQQAGTSSVQLYGIVDMAYRHTNNEGPAGSPGGSLSQ
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEHHEECCCCCCCCCCCCHHHH
MVGGGMSQSRWGINVTEDLGGGLKALVNLENRFGADTGTPATPYFQQSWVGLQGGFGRVT
HHCCCCCCCCCCCEEHHHHCCCCEEEEEHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEE
LGRQYNVLFDLVTSTYASYPYSPYMDVYKPEIGFALGARADNMIKYMAEVGPWRGGLQYS
ECCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCEEE
FDEKSATGGKTAGGYVRYASGGLAAGLGYQQYEFASGKKIDAWTLGGSYRMGNWYFNGGY
CCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCCEEEEEECCCCEEECCEEEECCC
GQNKVDDGLTAVDRAVLAAMWQGGINGGFGGPAFLAANKRTIYKIGAGYQITPQINLGAH
CCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCEEEEEEEECCHH
YFRAEQKGNTDLAKAKADFFTMALDYAFSKRTDAYIEVDHTKLKGDQVSLNNAAGQPNGA
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCCEEEECCCCCCCCCC
RSRTGYTIGLRHRF
CCCCCEEEEEEECC
>Mature Secondary Structure
MRIPSVKKTVAMTTLAVAAPFTFAQQAGTSSVQLYGIVDMAYRHTNNEGPAGSPGGSLSQ
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEHHEECCCCCCCCCCCCHHHH
MVGGGMSQSRWGINVTEDLGGGLKALVNLENRFGADTGTPATPYFQQSWVGLQGGFGRVT
HHCCCCCCCCCCCEEHHHHCCCCEEEEEHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEE
LGRQYNVLFDLVTSTYASYPYSPYMDVYKPEIGFALGARADNMIKYMAEVGPWRGGLQYS
ECCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCEEE
FDEKSATGGKTAGGYVRYASGGLAAGLGYQQYEFASGKKIDAWTLGGSYRMGNWYFNGGY
CCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCCEEEEEECCCCEEECCEEEECCC
GQNKVDDGLTAVDRAVLAAMWQGGINGGFGGPAFLAANKRTIYKIGAGYQITPQINLGAH
CCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCEEEEEEEECCHH
YFRAEQKGNTDLAKAKADFFTMALDYAFSKRTDAYIEVDHTKLKGDQVSLNNAAGQPNGA
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCCEEEECCCCCCCCCC
RSRTGYTIGLRHRF
CCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]