Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is purH [H]
Identifier: 120609590
GI number: 120609590
Start: 972692
End: 974293
Strand: Direct
Name: purH [H]
Synonym: Aave_0896
Alternate gene names: 120609590
Gene position: 972692-974293 (Clockwise)
Preceding gene: 120609589
Following gene: 120609594
Centisome position: 18.17
GC content: 67.6
Gene sequence:
>1602_bases ATGAACGCACTTCTCTCCGTCTCCGACAAGACCGGCATCGTCGAATTCGCCCGGGCTCTGCACGCCCTGGGCATCCGCCT GCTGTCCACCGGCGGCACCGCCAAGCTGCTGGCCGAGCAGGGTCTGCCCGTCACGGAAGTGGCCGAGGTGACCCAGTTCC CCGAAATGCTCGACGGCCGCGTGAAGACGCTGCACCCCAAGGTGCACGGCGGCCTGCTCGCGCGCCGCGAGCTGCCGGAA CACATGGCCGCACTGAAGGAGCACGGCATCGACACCATCGACCTGCTGGTGGTGAACCTCTACCCCTTCGAGGCCACCGT GGCCAAGGCCGGCTGCACGCTGGCCGACGCCATCGAGAACATCGACATCGGCGGCCCCGCCATGGTGCGCAGCGCCGCCA AGAACTGGAAAGACGTGGGCGTGGTCACCTCGGCCGACCAGTACGACGCCGTGCTGGGTGAACTGAAGGCCGCGGGCAAG CTGTCCGACAAGCTGCGCTTCGCGCTGTCGGTGGCCGCGTTCAACCGCATCGCGCAGTACGACGGCGCCATCAGCGACTA CCTCTCCTCCGTCACCTTCGAGGCCGAGAAGCTGTCCGAGGCCTACGTGCCCGAGCGCAATCCCTTCCCGGGCCAGAGCA ACGGCCAGTTCGTCAAGCTGCAGGACCTGCGCTACGGCGAGAACAGCCACCAGCAGGCGGCCCTCTACCGCGACCTGTAC CCCGCGCCCGGCTCCATCGTCACGGGCGAGCAGCTGCAGGGCAAGGAACTCAGCTACAACAACATCGCCGACGCCGATGC CGCGTGGGAGTGCGTGAAGAGCTTCGACGCCGCCGCCTGCGTGATCGTCAAGCATGCCAACCCCTGCGGCGTGGCCGTGG GCCTGGACGCCGCCGACGCCTACGGCAAGGCCTTCCAGACCGATCCCACCAGCGCCTTCGGCGGCATCATCGCCTTCAAC CGCCCGGTGGACGCGGCCGCCGCGCAATTGGTCGTGAAGCAGTTCGTCGAGGTGCTGATGGCGCCCGAGTTCACGCCCGA GGCGCTGGAGATCTTCAAGCCCAAGACCAACGTGCGCCTGCTGAAGATCGCGCTGCCGGAGCACAAGGGCACGACGGCCT GGAGCCGCGGCCGCAACGCCATGGATGCCAAGCGCATCGGCTCCGGCATGCTGCTGCAGACGGCCGACAACCACGAGCTG TCGCTGATGGACCTCAAGGTGGTCACCAAGAAGCAGCCCACGCTCGAGGAGATGGAAGACCTGCTGTTCGCCTGGAAGGT CGCCAAGTACGTCAAGAGCAATGCCATCGTGTTCTGCAAGGGCGGCATGACGATGGGCGTGGGCGCGGGCCAGATGAGCC GCCTGGATTCGGCGCGCATCGCCAGCATCAAGGCCGAGCACGCCAAGCTGTCGCTGCAGGGCACGGTGGTGGCGAGCGAC GCCTTCTTCCCGTTCCGCGACGGCCTGGACGTGGTGGTGGATGCGGGCGCGACCTGCGTGATCCAGCCCGGCGGCTCCAT GCGCGATCAGGAAGTGATCGACGCGGCCGACGAGCGCGGCGTGGCCATGGTGTTCAGCGGCGTGCGCCACTTCCGCCACT AA
Upstream 100 bases:
>100_bases CCGCCGAATGGCTGGGGCTGAACCGCAACACCCTGCGCAAGAAGCTCGTGGAGCACAAGCTGCTCTGACCGACCGAATCC ACAACCTCCCCACCACCGCA
Downstream 100 bases:
>100_bases GAGCGGCTAACACGACCCTTCTGGCGTCGTTGCCGCATCTTGTCGTACTACTCGTACTGCCTGCGATACTGCGCCTGGCC AGAACCGCTTCGCTGGGTCG
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MNALLSVSDKTGIVEFARALHALGIRLLSTGGTAKLLAEQGLPVTEVAEVTQFPEMLDGRVKTLHPKVHGGLLARRELPE HMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIENIDIGGPAMVRSAAKNWKDVGVVTSADQYDAVLGELKAAGK LSDKLRFALSVAAFNRIAQYDGAISDYLSSVTFEAEKLSEAYVPERNPFPGQSNGQFVKLQDLRYGENSHQQAALYRDLY PAPGSIVTGEQLQGKELSYNNIADADAAWECVKSFDAAACVIVKHANPCGVAVGLDAADAYGKAFQTDPTSAFGGIIAFN RPVDAAAAQLVVKQFVEVLMAPEFTPEALEIFKPKTNVRLLKIALPEHKGTTAWSRGRNAMDAKRIGSGMLLQTADNHEL SLMDLKVVTKKQPTLEEMEDLLFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAEHAKLSLQGTVVASD AFFPFRDGLDVVVDAGATCVIQPGGSMRDQEVIDAADERGVAMVFSGVRHFRH
Sequences:
>Translated_533_residues MNALLSVSDKTGIVEFARALHALGIRLLSTGGTAKLLAEQGLPVTEVAEVTQFPEMLDGRVKTLHPKVHGGLLARRELPE HMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIENIDIGGPAMVRSAAKNWKDVGVVTSADQYDAVLGELKAAGK LSDKLRFALSVAAFNRIAQYDGAISDYLSSVTFEAEKLSEAYVPERNPFPGQSNGQFVKLQDLRYGENSHQQAALYRDLY PAPGSIVTGEQLQGKELSYNNIADADAAWECVKSFDAAACVIVKHANPCGVAVGLDAADAYGKAFQTDPTSAFGGIIAFN RPVDAAAAQLVVKQFVEVLMAPEFTPEALEIFKPKTNVRLLKIALPEHKGTTAWSRGRNAMDAKRIGSGMLLQTADNHEL SLMDLKVVTKKQPTLEEMEDLLFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAEHAKLSLQGTVVASD AFFPFRDGLDVVVDAGATCVIQPGGSMRDQEVIDAADERGVAMVFSGVRHFRH >Mature_533_residues MNALLSVSDKTGIVEFARALHALGIRLLSTGGTAKLLAEQGLPVTEVAEVTQFPEMLDGRVKTLHPKVHGGLLARRELPE HMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIENIDIGGPAMVRSAAKNWKDVGVVTSADQYDAVLGELKAAGK LSDKLRFALSVAAFNRIAQYDGAISDYLSSVTFEAEKLSEAYVPERNPFPGQSNGQFVKLQDLRYGENSHQQAALYRDLY PAPGSIVTGEQLQGKELSYNNIADADAAWECVKSFDAAACVIVKHANPCGVAVGLDAADAYGKAFQTDPTSAFGGIIAFN RPVDAAAAQLVVKQFVEVLMAPEFTPEALEIFKPKTNVRLLKIALPEHKGTTAWSRGRNAMDAKRIGSGMLLQTADNHEL SLMDLKVVTKKQPTLEEMEDLLFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAEHAKLSLQGTVVASD AFFPFRDGLDVVVDAGATCVIQPGGSMRDQEVIDAADERGVAMVFSGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=495, Percent_Identity=35.1515151515151, Blast_Score=249, Evalue=3e-66, Organism=Escherichia coli, GI1790439, Length=535, Percent_Identity=57.0093457943925, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71985564, Length=520, Percent_Identity=32.8846153846154, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71985574, Length=390, Percent_Identity=25.1282051282051, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71985556, Length=130, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323056, Length=494, Percent_Identity=35.4251012145749, Blast_Score=266, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6323768, Length=499, Percent_Identity=34.2685370741483, Blast_Score=256, Evalue=4e-69, Organism=Drosophila melanogaster, GI24649832, Length=494, Percent_Identity=36.8421052631579, Blast_Score=269, Evalue=5e-72,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 57246; Mature: 57246
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALLSVSDKTGIVEFARALHALGIRLLSTGGTAKLLAEQGLPVTEVAEVTQFPEMLDGR CCCEEECCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC VKTLHPKVHGGLLARRELPEHMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIEN CEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCHHHHHHHC IDIGGPAMVRSAAKNWKDVGVVTSADQYDAVLGELKAAGKLSDKLRFALSVAAFNRIAQY CCCCCHHHHHHHHHCCHHCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DGAISDYLSSVTFEAEKLSEAYVPERNPFPGQSNGQFVKLQDLRYGENSHQQAALYRDLY CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCC PAPGSIVTGEQLQGKELSYNNIADADAAWECVKSFDAAACVIVKHANPCGVAVGLDAADA CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCHHH YGKAFQTDPTSAFGGIIAFNRPVDAAAAQLVVKQFVEVLMAPEFTPEALEIFKPKTNVRL HCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEE LKIALPEHKGTTAWSRGRNAMDAKRIGSGMLLQTADNHELSLMDLKVVTKKQPTLEEMED EEEEECCCCCCCHHHCCCCCHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHH LLFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAEHAKLSLQGTVVASD HHHHHHHHHHHHCCEEEEEECCCEECCCCCHHHHCCCHHHHHHHHHHHEEEEEEEEEECC AFFPFRDGLDVVVDAGATCVIQPGGSMRDQEVIDAADERGVAMVFSGVRHFRH CCCCCCCCCEEEEECCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNALLSVSDKTGIVEFARALHALGIRLLSTGGTAKLLAEQGLPVTEVAEVTQFPEMLDGR CCCEEECCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC VKTLHPKVHGGLLARRELPEHMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIEN CEEECCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCHHHHHHHC IDIGGPAMVRSAAKNWKDVGVVTSADQYDAVLGELKAAGKLSDKLRFALSVAAFNRIAQY CCCCCHHHHHHHHHCCHHCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DGAISDYLSSVTFEAEKLSEAYVPERNPFPGQSNGQFVKLQDLRYGENSHQQAALYRDLY CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCC PAPGSIVTGEQLQGKELSYNNIADADAAWECVKSFDAAACVIVKHANPCGVAVGLDAADA CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCHHH YGKAFQTDPTSAFGGIIAFNRPVDAAAAQLVVKQFVEVLMAPEFTPEALEIFKPKTNVRL HCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEE LKIALPEHKGTTAWSRGRNAMDAKRIGSGMLLQTADNHELSLMDLKVVTKKQPTLEEMED EEEEECCCCCCCHHHCCCCCHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHH LLFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAEHAKLSLQGTVVASD HHHHHHHHHHHHCCEEEEEECCCEECCCCCHHHHCCCHHHHHHHHHHHEEEEEEEEEECC AFFPFRDGLDVVVDAGATCVIQPGGSMRDQEVIDAADERGVAMVFSGVRHFRH CCCCCCCCCEEEEECCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA